Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30915
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 182 2e-46
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 182 2e-46
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 153 9e-38
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 139 2e-33
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 119 2e-27
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 31 0.59
06_01_0229 - 1757998-1758241,1758318-1758388,1758467-1758586,175... 30 1.8
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 30 1.8
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 3.2
06_03_1445 - 30209354-30209396,30209798-30209875,30210220-302102... 29 4.2
06_03_1433 - 30129184-30129226,30129628-30129705,30130050-301301... 29 4.2
06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280... 29 4.2
06_01_1188 + 10219546-10219664,10220855-10223660 29 4.2
08_02_0802 + 21386248-21387468 28 5.5
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 28 5.5
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 5.5
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 28 5.5
07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049 28 7.3
05_04_0123 + 18210069-18213737 28 7.3
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 27 9.7
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561... 27 9.7
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 182 bits (444), Expect = 2e-46
Identities = 98/194 (50%), Positives = 119/194 (61%), Gaps = 2/194 (1%)
Frame = +3
Query: 63 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 239
GLEIWRIE + V VPK G F++GDSY++L TT K+ DIH+WLG TSQDEAG
Sbjct: 77 GLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAG 136
Query: 240 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 419
AAI TV LD G AVQ+REVQ E++ FL YF P I +GG ASGF H INE
Sbjct: 137 TAAIKTVELD-AALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 420 E-KRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVA 596
RLF +GK V VK+V SLN+ D FILD +IF F G + ER KA+ V
Sbjct: 196 HVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVV 255
Query: 597 NQIKDQDHNGRADI 638
+KD +H G+ D+
Sbjct: 256 QYLKDSNHEGKCDV 269
Score = 62.9 bits (146), Expect = 2e-10
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Frame = +3
Query: 66 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAA 245
L++WR+ E + ++ FYSGD YI + ++ I W G ++ QDE A
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIGTWFGKKSVQDEKTTA 512
Query: 246 AILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFS--PAIRYLKGGHASGFSHVTINEGT 419
+++ + + Q V+ YE KE E+FS + KGG ++G+ G
Sbjct: 513 ----ISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQNLVIFKGGVSTGYKKFVSENGI 568
Query: 420 EK--------RLFQIKGK--RNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGV 569
E LF+++G N++ QV SLN+ C++L +F ++G + +
Sbjct: 569 EDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWIGNLSSSM 628
Query: 570 ERMKAITVANQIK 608
++ A + IK
Sbjct: 629 DQELAERQLDVIK 641
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 408 NEGTEKRLFQIKGKRNV-RVKQV-KPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMK 581
++ ++ LF + V +V+++ T + L D FILD +FV+VG++ R +
Sbjct: 676 DQESDPHLFSCTFSKGVLKVREIFNFTQDDLMTEDVFILDCHSCVFVWVGQRVDTKMRAQ 735
Query: 582 AITVANQIKDQD 617
A++V + + D
Sbjct: 736 ALSVGEKFLELD 747
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 182 bits (444), Expect = 2e-46
Identities = 98/194 (50%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Frame = +3
Query: 63 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 239
GLE+WRIENF+PV VP + G FY GDSYI+L TT K+ D+H+WLG TSQDEAG
Sbjct: 38 GLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAG 97
Query: 240 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 419
AAILTV L D G AVQ+REVQ E+++ L YF P I GG ASGF+HV +N+
Sbjct: 98 TAAILTVEL-DAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 420 E-KRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVA 596
RL+ +GK V VK+V SLN+ D FILD ++IF F G + ER KA+ V
Sbjct: 157 HVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVV 216
Query: 597 NQIKDQDHNGRADI 638
IKD H G+ ++
Sbjct: 217 QYIKDTFHEGKCEV 230
Score = 68.1 bits (159), Expect = 6e-12
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Frame = +3
Query: 66 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT-TGDKDRLTWDIHFWLGSRTSQDEAGA 242
L++WR+ + + Y+GD YI T TGD D+ I W G ++ +++ +
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGD-DKEECLIGTWFGKKSVEEDRTS 467
Query: 243 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKGGHASGFSHVTINEG 416
A ++L + FQ + Q + + YE KE +++F +++ KGG +SG+ + G
Sbjct: 468 A----ISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAVNG 523
Query: 417 TEK--------RLFQIK--GKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVG 551
T+ LF+I+ G N++ QV SLN+ C+IL + +F + G
Sbjct: 524 TDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTG 578
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 153 bits (372), Expect = 9e-38
Identities = 89/193 (46%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Frame = +3
Query: 63 GLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWDIHFWLGSRTSQDEAG 239
GLEIWRIENF+PV +P + +G F+ GDSYI+L TT K+ L DIH+W+G TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 240 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 419
AAILTV L D G AVQ+RE+Q E+ +FL YF P I GG ASGF HV
Sbjct: 111 TAAILTVEL-DAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV------ 163
Query: 420 EKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVAN 599
+V SLN+ D FILD +IF F G + ER KA+ V
Sbjct: 164 ----------------EVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQ 207
Query: 600 QIKDQDHNGRADI 638
IKD H G+ ++
Sbjct: 208 YIKDTFHEGKCEV 220
Score = 63.7 bits (148), Expect = 1e-10
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Frame = +3
Query: 24 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF 203
E QA+ D L++WRI + + + +P FY+GD YI D+ I
Sbjct: 393 EEPQAYIDC--TGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGS 450
Query: 204 WLGSRT-SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF--SPAIRYLKG 374
W G ++ +D A ++ + ++ +FQ AVQ R YE KE +++F + + KG
Sbjct: 451 WFGKKSIEEDRVTAISLASKMVESAKFQ--AVQTR---LYEGKEPIQFFVIFQSFQVFKG 505
Query: 375 GHASGFSHVTINEGTEK--------RLFQIKGK--RNVRVKQVKPTFESLNNGDCFILDV 524
G +SG+ G + LF+I+G N++ QV SLN+ +IL
Sbjct: 506 GLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHD 565
Query: 525 DHQIFVFVGEKAKGVER 575
+ +F + G +++
Sbjct: 566 GNTVFTWTGNLTTSLDQ 582
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 453 NVRVKQVKP-TFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQD 617
N+++K++ T + L D FILD IFV+VG++ R++A+ + + D
Sbjct: 634 NLKIKEIYHFTQDDLMTEDVFILDCHSDIFVWVGQQVDVKVRLQALDIGEKFVKLD 689
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 486 ESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADI 638
E L C++LD ++FV++G ER A A ++ D+ + +
Sbjct: 285 ELLKTNKCYLLDCGVELFVWMGRTTSLQERKSASEAAEKLLSDDNRTKTHV 335
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 139 bits (336), Expect = 2e-33
Identities = 74/152 (48%), Positives = 94/152 (61%)
Frame = +3
Query: 189 WDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYL 368
+DIHFW+G +SQDEAG AAI TV LD G AVQHRE+Q YES +FL YF P I L
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDT-MLGGRAVQHRELQGYESDKFLSYFKPCIIPL 125
Query: 369 KGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFV 548
+GG ASGF + E RL+ KGKR +RVK+V SLN+ D FILD + +I+ F
Sbjct: 126 EGGFASGFK-TPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFN 184
Query: 549 GEKAKGVERMKAITVANQIKDQDHNGRADIEV 644
G + ER KA+ +K+ HNG D+ +
Sbjct: 185 GANSNIQERAKALEAIQHLKETYHNGVCDVAI 216
Score = 62.5 bits (145), Expect = 3e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +3
Query: 66 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNT--TGDKDRLTWDIHFWLGSRTSQDEAG 239
LE++ + A+PK + G FYSGD YIVL T +GDK R + + +W+G + S E
Sbjct: 400 LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDK-REEFYLTYWIG-KDSIPEDQ 457
Query: 240 AAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGT 419
A T N +G + R Q E +F+ F P + LKGG +SG+ +G
Sbjct: 458 EMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQPMV-ILKGGISSGYQKFVEEKGL 516
Query: 420 EKRLFQIKG 446
+ + G
Sbjct: 517 KDETYSGDG 525
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 119 bits (286), Expect = 2e-27
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Frame = +3
Query: 18 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWD 194
M V AF G KPGL+IW I +A+ K+ G FY+G++YI+L+T K + +
Sbjct: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
Query: 195 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKG 374
+H+W+G +++ A+ + L D + VQ+RE Q ES +FL YF P I ++G
Sbjct: 61 VHYWVGEEAKEEDCLTASDKAIEL-DVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Query: 375 GHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGE 554
S + ++ + +F+ +G+ RV +V + SL++ F++D + +IF+F G
Sbjct: 120 S-LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGC 178
Query: 555 KAKGVERMKAITVANQIKDQDHNGRADI 638
+ R KA+ V +K+ H GR +I
Sbjct: 179 NSSMQTRAKALDVVKHLKENRHCGRCEI 206
Score = 36.3 bits (80), Expect = 0.021
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Frame = +3
Query: 66 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF-WLGSRTSQDEAGA 242
L++W ++N + + Y+GD YI+ + +D + + F W G + ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYII-RYSYIEDGKDYHLFFAWSGLNSINEDRVA 460
Query: 243 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTE 422
AA L + D +G AV + + E + F F I + KGG + + +
Sbjct: 461 AASLMSGMID-SVKGHAVVAQVFEGREPEMFFLVFKSLIIF-KGGRSMAYKNFVSQRSDA 518
Query: 423 KRLFQIKGKRNVRVKQVK 476
+Q G RV+ +K
Sbjct: 519 NGWYQKNGVALFRVQGLK 536
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 417 TEKRLFQIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAIT 590
+ K+LF I + V V+ E LN+ +ILD ++F+++G ER ++T
Sbjct: 251 SSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSERRTSVT 308
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 31.5 bits (68), Expect = 0.59
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Frame = -2
Query: 644 HFDIGPSIVILVFNLVGYGDG----------FHPLDSFRLLTHKDEDLMVYVQNEAVPVV 495
H D+ PSI+ L+ N++GY H L + TH D+ L+ +VQ+ +P+V
Sbjct: 386 HDDLRPSILRLINNIIGYWKDSEARIKVVSFCHMLIQLAISTHNDK-LISFVQDNLIPMV 444
Query: 494 QGLKCR-FYLLNADVSFTLDLEESFLCSLIDRHVAE 390
++C F ++ + L E+++ C + V+E
Sbjct: 445 --VRCLIFEPISNNNDLLLLCEDAYRCIQREESVSE 478
>06_01_0229 -
1757998-1758241,1758318-1758388,1758467-1758586,
1758685-1758805,1759264-1759418,1759507-1759644,
1759688-1759801
Length = 320
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 177 DRLTWDIHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQ 299
D ++WD HF T +A+L +++D ++ GS++Q
Sbjct: 155 DTISWDYHFEHAGNTPVTFTVKSAVLKESIEDLEWPGSSIQ 195
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Frame = +3
Query: 21 PEVHQAFADAGRKPGLEIWRIENF-EP--------VAVPKTQF--GLFYSGDS-YIVLNT 164
P+ H+ R GL+I ++ EP V+ P F G+ SG + IVL+T
Sbjct: 289 PDDHEPLLSTTRSTGLDISSSDSSDEPCNGDQVPLVSFPNNWFRLGIIPSGSTDAIVLST 348
Query: 165 TGDKDRLTWDIHFWLGSRTSQDEA 236
TG++D +T + LG R S D A
Sbjct: 349 TGERDPVTSALLIILGRRISLDIA 372
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/96 (27%), Positives = 38/96 (39%)
Frame = +1
Query: 205 GSARGPARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRSS*NISHQPSAI*KADTP 384
G +RG + ++ R SR +SR++R S + SPR S S P D+
Sbjct: 149 GRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGS-PRDSR 207
Query: 385 QASAT*RSMREQRNDSSRSRVKETSALSR*NRHLSP 492
+ R + R SR SA R+ SP
Sbjct: 208 SPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSP 243
>06_03_1445 -
30209354-30209396,30209798-30209875,30210220-30210285,
30212275-30212322,30212408-30212571,30212726-30213581,
30213673-30213786,30213853-30213996,30214075-30214304,
30214584-30214724,30214810-30214887,30214972-30215053,
30215130-30215184,30215284-30215407,30215548-30215641,
30215718-30215794,30215873-30215982,30216058-30216655
Length = 1033
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 542 DEDLMVYVQNEAVPVVQGLKCRFYLLNADVSF 447
D L ++ QNE VV RF++L +DV F
Sbjct: 363 DRKLFIFFQNEHFNVVYKYHGRFFVLESDVGF 394
>06_03_1433 -
30129184-30129226,30129628-30129705,30130050-30130115,
30132105-30132152,30132238-30132401,30132556-30133411,
30133503-30133616,30133683-30133826,30133905-30134134,
30134414-30134554,30134640-30134717,30134802-30134883,
30134958-30135012,30135112-30135235,30135376-30135469,
30135546-30135622,30135701-30135810,30135886-30136483
Length = 1033
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 542 DEDLMVYVQNEAVPVVQGLKCRFYLLNADVSF 447
D L ++ QNE VV RF++L +DV F
Sbjct: 363 DRKLFIFFQNEHFNVVYKYHGRFFVLESDVGF 394
>06_03_1416 +
30027066-30027663,30027739-30027848,30027927-30028003,
30028080-30028173,30028314-30028437,30028537-30028591,
30028666-30028747,30028832-30028909,30028995-30029135,
30029416-30029645,30029724-30029867,30029934-30030047,
30030139-30030994,30031149-30031312,30031398-30031445,
30033435-30033500,30033845-30033922,30034324-30034366
Length = 1033
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 542 DEDLMVYVQNEAVPVVQGLKCRFYLLNADVSF 447
D L ++ QNE VV RF++L +DV F
Sbjct: 363 DRKLFIFFQNEHFNVVYKYHGRFFVLESDVGF 394
>06_01_1188 + 10219546-10219664,10220855-10223660
Length = 974
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2
Query: 560 RLLTHKDEDLMVYVQNEAVPVVQGLKCRFYLLNADVSFTLD 438
+LL E L+V VQ+ A +V+GLK + Y + D +T+D
Sbjct: 251 KLLKEFSEKLLVQVQHLADHLVEGLKEKRYFVVLDDLWTID 291
>08_02_0802 + 21386248-21387468
Length = 406
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 168 GDKDRLTWDIHFWLGSRTSQDEAGAAA 248
GD+ +L+WD+H WL + AAA
Sbjct: 261 GDRVQLSWDLHNWLFPQREPPTTDAAA 287
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 220 PARTKPARRPSSR*TWTTNNSRDQRYSTERSNITSPRS-S*NISHQPS 360
P+ + R SR SR RYS RS + SPRS S + S+ P+
Sbjct: 120 PSEMRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPA 167
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +3
Query: 210 GSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASG 389
G +T +D+A TV+ +EQ QGS + ++ + +++E ++ S A HA+
Sbjct: 348 GEKTPEDDATTREP-TVDTKEEQNQGSVEEMKDAEAVDTEETVQQSSVAFDEAIQDHAAT 406
Query: 390 FSHVTINEGTEKRLFQIKGKRNVRVKQV 473
+ + + E + KG +V+ ++V
Sbjct: 407 TNPSSDIQSIEPE--ETKGPSDVKAEEV 432
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 26 STPSIRGCRQEAGSRNMED*ELRTGRRSEDSVRSLLLRGLLHCTEHHRR*GPSNMGHPF 202
+ PS R RQ+ G +++ + G R D LR + HRR G ++G F
Sbjct: 760 AAPSPRRDRQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSSPSPDHRRTGGDSLGFSF 818
>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
Length = 444
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 82 LRTSNRSPFRRLSSVSSTPGTPTLY*TPQAIRTV*HGTSISGSARGPARTKPARRPSSR 258
L S R RRL+ S TPGTP +P + + SGS PA+ SS+
Sbjct: 28 LPPSPRLQGRRLTPPSCTPGTPAALPSPGPDKEPEREAAGSGSGSATTPRSPAQLGSSQ 86
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 456 VRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAI 587
+R+K +K + L NG C + DHQ+ F K +ERM+++
Sbjct: 809 LRLKDMKK-LKYLCNGFCSDKECDHQLVAFPKLKLLSLERMESL 851
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 266 GRRTIPGISGTAPRGPILRVQGVPRIFLTSHPLFKR 373
G+ P T P G I+ V+G P F T H + R
Sbjct: 199 GKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGAR 234
>08_01_0649 +
5607234-5608397,5609358-5609513,5609598-5609796,
5612419-5613608,5614505-5614660,5614742-5615041
Length = 1054
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 565 PFAFSPTKTKI*WSTSKMKQSPLFKDSNVGF 473
P +F TK I S ++ SP++KD N GF
Sbjct: 226 PLSFERTKESICSSDNRRWPSPVWKDDNDGF 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,535,600
Number of Sequences: 37544
Number of extensions: 400846
Number of successful extensions: 1144
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -