Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30914
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 461 e-130
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 460 e-130
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 460 e-130
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 456 e-129
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 456 e-129
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 456 e-129
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 455 e-128
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 454 e-128
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 453 e-128
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 426 e-120
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 390 e-109
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 385 e-107
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 270 5e-73
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 167 6e-42
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 163 1e-40
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 141 4e-34
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 118 3e-27
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 95 5e-20
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 86 3e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 81 5e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 5e-10
At5g43500.2 68418.m05318 expressed protein 36 0.035
At5g43500.1 68418.m05319 expressed protein 36 0.035
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 29 2.3
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 3.0
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 3.0
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 3.0
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 3.0
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 3.0
At5g67080.1 68418.m08458 protein kinase family protein contains ... 29 4.0
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 4.0
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 4.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.0
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 7.0
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 9.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 9.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 461 bits (1136), Expect = e-130
Identities = 213/236 (90%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA S+S+EKSYELPD
Sbjct: 187 LTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 460 bits (1133), Expect = e-130
Identities = 211/236 (89%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPD
Sbjct: 187 LTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 460 bits (1133), Expect = e-130
Identities = 211/236 (89%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPD
Sbjct: 187 LTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 456 bits (1123), Expect = e-129
Identities = 209/236 (88%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRD
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPD
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 456 bits (1123), Expect = e-129
Identities = 209/236 (88%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRD
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPD
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 456 bits (1123), Expect = e-129
Identities = 209/236 (88%), Positives = 225/236 (95%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRD
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YELPD
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 455 bits (1121), Expect = e-128
Identities = 211/236 (89%), Positives = 224/236 (94%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPD
Sbjct: 187 LTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 454 bits (1118), Expect = e-128
Identities = 210/236 (88%), Positives = 224/236 (94%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPD
Sbjct: 187 LTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 453 bits (1117), Expect = e-128
Identities = 212/236 (89%), Positives = 223/236 (94%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA +S+S+EK+YELPD
Sbjct: 187 LTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPD 246
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 247 GQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 426 bits (1050), Expect = e-120
Identities = 190/236 (80%), Positives = 217/236 (91%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
L+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMF
Sbjct: 68 LSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMF 127
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
E+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD
Sbjct: 128 ESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 187
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQEM A S++++++YELPD
Sbjct: 188 LTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPD 247
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N V+S
Sbjct: 248 GQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLS 303
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 390 bits (961), Expect = e-109
Identities = 180/236 (76%), Positives = 208/236 (88%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
ETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR
Sbjct: 82 ETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRH 141
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQEM A S++++++YELPD
Sbjct: 142 LTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPD 198
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N V+S
Sbjct: 199 GQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLS 254
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 385 bits (948), Expect = e-107
Identities = 174/236 (73%), Positives = 203/236 (86%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
LTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMF
Sbjct: 56 LTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMF 115
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
E+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRD
Sbjct: 116 ESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRD 175
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
LTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPD
Sbjct: 176 LTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPD 235
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
GQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+
Sbjct: 236 GQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMT 291
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 270 bits (663), Expect = 5e-73
Identities = 116/236 (49%), Positives = 167/236 (70%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 180
L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 181 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 360
E +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRH 185
Query: 361 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 540
+T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E +T L K+Y LPD
Sbjct: 186 ITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPD 245
Query: 541 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
G+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R LY + V+S
Sbjct: 246 GRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLS 301
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 167 bits (406), Expect = 6e-42
Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 12/246 (4%)
Frame = +1
Query: 7 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 186
L YPIEHG + +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 187 FNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 351
FN P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + I + +A
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIA 205
Query: 352 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD----FEQEMATAAASTSLE 519
G+D+T ++ +++ ERG + ++ R +KE CY D F + A
Sbjct: 206 GKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQW 265
Query: 520 KSYELPDGQVIT--IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLY 690
K + G T +G ERF PE F P + + + + I +D R+ LY
Sbjct: 266 KGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALY 325
Query: 691 ANTVMS 708
N V+S
Sbjct: 326 KNIVLS 331
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 163 bits (395), Expect = 1e-40
Identities = 100/273 (36%), Positives = 151/273 (55%), Gaps = 42/273 (15%)
Frame = +1
Query: 16 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 195
PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 196 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 375
PA+++A VL+ +A+GR T +V+D G G + P+++GY L A++ L G LTD L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCL 213
Query: 376 MKILTERG------YSF-------------------TTTA-----EREIVRDIKEKLCYV 465
+K L +G YSF TT + +R IV DIK+ +C V
Sbjct: 214 LKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRV 273
Query: 466 ALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--- 624
+ + + T+ SYELPDGQ + IG +RF+ P+ +F PS + GME
Sbjct: 274 PDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEM 330
Query: 625 -----GIHETVYNSIMKCDVDIRKDLYANTVMS 708
G+ V SI KCDVDIR++LY++ +++
Sbjct: 331 IPSVRGLPHMVMESINKCDVDIRRELYSSILLA 363
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 141 bits (342), Expect = 4e-34
Identities = 88/231 (38%), Positives = 118/231 (51%), Gaps = 1/231 (0%)
Frame = +1
Query: 16 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 192
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 193 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 372
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKL 176
Query: 373 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 552
+ L + S + V +KE+ A E E+A + + LPDGQVI
Sbjct: 177 FAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVI 231
Query: 553 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVM 705
+IG ER+ EALFQPS LG+E GI E + I + + L NTV+
Sbjct: 232 SIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVL 282
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 118 bits (285), Expect = 3e-27
Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Frame = +1
Query: 7 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 186
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 187 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 336
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 337 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSL 516
R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A +L
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTL 238
Query: 517 EKS-YELPDGQVITIG 561
KS Y LPDG T G
Sbjct: 239 IKSTYVLPDGVTHTKG 254
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/98 (27%), Positives = 48/98 (48%)
Frame = +1
Query: 415 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 594
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 595 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMS 708
QP+ LGM G+ E + +I C ++ LY + +++
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILT 345
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 94.7 bits (225), Expect = 5e-20
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Frame = +1
Query: 73 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 222
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 223 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 399
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 400 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 579
SF + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQT 352
Query: 580 PEALFQPSFLGMESCGIHETVYNSIMKCD 666
E LFQP GM + +H+ V + CD
Sbjct: 353 GEILFQPRLAGMRAMSLHQAVSLCMDHCD 381
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 85.8 bits (203), Expect = 3e-17
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Frame = +1
Query: 73 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 222
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 223 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 399
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 400 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 579
SF + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQT 352
Query: 580 PEALFQPSFLGMESCGIHETVY 645
E LFQP G+ +H+ VY
Sbjct: 353 GEILFQPRLAGII---VHKLVY 371
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 81.4 bits (192), Expect = 5e-16
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Frame = +1
Query: 16 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 192
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 193 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 357
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 358 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 489
+TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +1
Query: 421 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 591
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 592 FQPSFLGMESCGIHETVYNSIMKCDVD 672
F P+ +G++ G+ E SI + D
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHD 629
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 16 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 162
P + GI+T+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 109 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 288
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 289 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 384
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +1
Query: 109 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 288
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 289 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 384
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 241 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 420
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 421 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 561
IKE + D +Q AA + S+ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 29.1 bits (62), Expect = 3.0
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Frame = +1
Query: 106 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 273
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 274 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 453
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 454 LCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 561
+ Y D AAAS + S+ LP G +G
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 423 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 295
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 168 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 61
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 424 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 519
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 180 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 55
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At5g67080.1 68418.m08458 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +1
Query: 211 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-LTDYLMKIL 387
A+ V+ SG+T + + + +S + I G +P L GRD L+ +K
Sbjct: 195 ALGCVVVEMFSGKTAWSLKEGSNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDP 254
Query: 388 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 567
+R + + D+ + DF M T STS +E PD ++ G++
Sbjct: 255 KKRWTAEMLLNHPFVTVDVDHDVLVKEEDFVVNMKTEDVSTSPRCPFEFPDWVSVSSGSQ 314
Query: 568 RFRCPE 585
P+
Sbjct: 315 TIDSPD 320
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 291 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 407
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 291 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 407
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 162
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 1 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 162
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 311 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 135
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 134 GASVSST---GCSSGAT 93
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 665 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 531
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 180 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 55
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,844,982
Number of Sequences: 28952
Number of extensions: 278398
Number of successful extensions: 1067
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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