Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30913
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.7
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 28 5.7
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 28 5.7
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 28 5.7
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 27 10.0
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = -3
Query: 576 VSYIIWIGHNENDTSCPVRVKTHIFAASEP*EDDDTVRSTPSHHRSRPVHV*RTPDDPQP 397
VS I I H E+D PV++ ++ A++ E D +R S + + R P+ P+
Sbjct: 268 VSCPIIILHAEDDKILPVKLGRALYEAAKDAERDIKIREFSSDYGLGHKFICRYPELPEI 327
Query: 396 V*TRLGQTSTPRT 358
+ +G + P T
Sbjct: 328 IEEFVGSVTPPST 340
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 300 QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 440
++TFCF LR G+ + Y+F +L +D + + E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 300 QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 440
++TFCF LR G+ + Y+F +L +D + + E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244
>Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical
protein W06G6.10 protein.
Length = 101
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 264 CPTWMHSGVFFFQKTFCFCIVNCLRQACSG 353
C + MH + FF + C C C++ C G
Sbjct: 72 CCSCMHGVLRFFAELCCNCCAGCVQGICQG 101
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 300 QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 440
++TFCF LR G+ + Y+F +L +D + + E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 300 QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 440
++TFCF LR G+ + Y+F +L +D + + E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 428 WTGRDRWWLGVERTVSSSSHGS 493
WTG D +W G T SS S S
Sbjct: 18 WTGDDSYWAGAGTTASSQSASS 39
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 428 WTGRDRWWLGVERTVSSSSHGS 493
WTG D +W G T SS S S
Sbjct: 7 WTGDDSYWAGAGTTASSQSASS 28
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 428 WTGRDRWWLGVERTVSSSSHGS 493
WTG D +W G T SS S S
Sbjct: 7 WTGDDSYWAGAGTTASSQSASS 28
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 107 WRRYYTITHKNEALKINKLHFILFKHNP 190
W +YTI NE L +H ++ KH P
Sbjct: 259 WSLFYTIHSLNEKLFHEDVHSVVDKHEP 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,343,071
Number of Sequences: 27780
Number of extensions: 241290
Number of successful extensions: 552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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