Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30909
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q00XR4 Cluster: Homology to unknown gene; n=2; Ostreoco...    34   4.0  
UniRef50_Q55IK7 Cluster: Putative uncharacterized protein; n=2; ...    33   5.3  
UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase expres...    33   7.0  
UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1; ...    33   9.3  
UniRef50_Q6C240 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    33   9.3  

>UniRef50_Q00XR4 Cluster: Homology to unknown gene; n=2;
           Ostreococcus|Rep: Homology to unknown gene -
           Ostreococcus tauri
          Length = 329

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +1

Query: 46  GTPAGKFGSAIAIGSLLIGAGCGFYFHNAS-ITQNLRRAAEKLYEDPIEEVERRLLIASG 222
           GT A K+G+ +             + H AS +   LR  A K YED +EE    LL A G
Sbjct: 182 GTVAAKYGATLMRRLRADVERVAAWDHQASPVVDTLRHGAGKEYEDLLEE----LLRAEG 237

Query: 223 LPNRTGDQIRALIDGYER-PD 282
           +P  T   +RA  DG+ R PD
Sbjct: 238 IPFVTERDLRA--DGHARTPD 256


>UniRef50_Q55IK7 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 952

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 286 AYRGAHIHLLEHVSDHQFYLVGRWLSIISFPPLLWDPHIIFLQL-DEDSVLCS 131
           A    H+ + +HVSD Q    G W+   + PP L  P I  L L   D + CS
Sbjct: 49  ARENGHVEIWKHVSDKQVDSYGNWVLYKTLPPTLTHPTISQLALVIRDPLNCS 101


>UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase
           expression-like; n=5; Bacteria|Rep: Regulator of
           polyketide synthase expression-like - Frankia sp.
           (strain CcI3)
          Length = 539

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 25  WKPRKISGTPAGKF-GSAIAIGSLLIGAGCGFYFHNASITQNLRRAAEKLYEDPIEEVER 201
           + P + +GTP  +  G+ +  GS L       Y H  ++   LR+AAE    DP +  ER
Sbjct: 459 YAPLRDAGTPLLETTGAYLDFGSSLEATARALYLHTNTVRYRLRKAAEVCGLDPADHRER 518

Query: 202 RLL 210
            +L
Sbjct: 519 FIL 521


>UniRef50_UPI000023EAAE Cluster: hypothetical protein FG07531.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG07531.1 - Gibberella zeae PH-1
          Length = 363

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +1

Query: 28  KPRKISGTPAGKFGSAIAIGSLLIGAGCGFY---FHNASITQNLRRAAEKLYEDPIEEVE 198
           +P+    T  G  GS   +G+++ G+  GF    F    +   LR+        P++EV+
Sbjct: 225 EPKPTETTETGSGGSKTNVGAIVGGSIGGFLVLSFLVLGVLWVLRKNRRNENPPPVQEVQ 284

Query: 199 RRLLIASGLPNRTGDQIRALIDGYERP 279
             ++    +P   GD +  +   Y +P
Sbjct: 285 PAVVPQHNIPQTPGDSVPPMNQNYPKP 311


>UniRef50_Q6C240 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 305

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 22  KWKPRKISGTPAGKFGS--AIAIGSLLIGAGCGFYFHNASITQ 144
           K+KP+K  GTP  K  +   + +G +LI AG   YF +  + Q
Sbjct: 61  KYKPQKYLGTPGKKIATYGTLILGGMLISAGSHVYFASNLVKQ 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,261,626
Number of Sequences: 1657284
Number of extensions: 10138386
Number of successful extensions: 23065
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23060
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)