Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30908
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    31   0.038
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   1.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.5  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.8  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 31.1 bits (67), Expect = 0.038
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 366 VAQGSFSWTSPEGVPISVNYVAD-ENGYQPTGNAIPTSPPVPEQIARALAYIAKNI 530
           V QGS+S   P+G   +V+Y AD  NG+    NA+    P+  +   A A +A  +
Sbjct: 48  VVQGSYSVVDPDGTKRTVDYTADPHNGF----NAVVRREPLAAKTIVAAAPVATKV 99


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 HRAHSPGHLLKVFPSASITSPTRT 441
           HR   PGH+ +  P  S  +PT T
Sbjct: 205 HRCRKPGHMKRDCPMESNNTPTST 228


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 242 FDSLSAVTLRYLGYYSDGGNRGDRDGQKRSR 150
           + + S  +L  L  Y DGG  G  D  KR+R
Sbjct: 900 YSNSSINSLNSLDNYGDGGEAGTGDSGKRAR 930



 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 114 TGMGSSCRIHFHTGLGRQPLPP 49
           TGM S  R  F  G+G  P PP
Sbjct: 766 TGMPSPSRSAFADGIGSPPPPP 787


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 426 VADENGYQPTGNAIPTSPPVPEQIARALAYIAKNIPL 536
           VADE  Y+  G A    PP  E I  AL  +  N+ L
Sbjct: 315 VADEELYELGGQAGGKPPPAKETIHFALPELLHNLNL 351


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 403 PSGDVQENEPCATTGTAGGFPPRLRGTP 320
           P GD Q + P +     GG PP    TP
Sbjct: 324 PMGDPQTSRPPSGNDNMGGGPPPSSATP 351


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 399 QEMSRRMSPVQRREQQGGFHQGYVELP 319
           Q+  ++   +QRR+QQ   HQG   +P
Sbjct: 264 QQPQQKQQQLQRRQQQQQQHQGQRYVP 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,861
Number of Sequences: 2352
Number of extensions: 18249
Number of successful extensions: 74
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)