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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30907
         (751 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)             114   8e-26
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)             101   6e-22
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)                    84   1e-16
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)                     75   5e-14
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)              70   2e-12
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   2e-08
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)                      49   5e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)                     45   6e-05
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)                  39   0.005
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)            36   0.046
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)                33   0.33 
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.43 
SB_15403| Best HMM Match : CH (HMM E-Value=0)                          30   1.7  
SB_56324| Best HMM Match : ASC (HMM E-Value=1.3e-14)                   30   2.3  
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)              29   3.0  
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.3  
SB_52622| Best HMM Match : Ank (HMM E-Value=1.2e-05)                   28   7.0  
SB_54206| Best HMM Match : SET (HMM E-Value=0.029)                     28   7.0  
SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0)                       28   7.0  
SB_15221| Best HMM Match : ASC (HMM E-Value=0.0016)                    28   7.0  
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)                28   9.3  
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012)                   28   9.3  
SB_42674| Best HMM Match : DUF26 (HMM E-Value=1)                       28   9.3  

>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 603

 Score =  114 bits (274), Expect = 8e-26
 Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
 Frame = +2

Query: 62  VRAKIASKRNPEKEKEAQEWIEGVLGAKF--PPG--ELFEDVLKDGTVLCQLINKLKPGS 229
           V+A I SK +P KE+EA++WI+ VLG       G  +     LKDG VLC+L N+L  G 
Sbjct: 420 VKAGIDSKYDPTKEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GG 477

Query: 230 VPKINTTGGQFKMMENITNFQSAIKA-YGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRE 406
             KIN     FK MENI NF S I+   GV   D+FQTVDL+EK ++  V+  + A+GR 
Sbjct: 478 DLKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRR 537

Query: 407 TYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVI-GLQAG--SNKGATQSGQNLGAGR 577
            Y   +   P LGPK + +  R F++  L  G+T+I   Q G  +   AT SGQ+ G  R
Sbjct: 538 AYSLGK-DVPQLGPKESTKNPRQFTERQLNEGKTIINSFQMGPAAKNVATASGQSFGRQR 596

Query: 578 KIL 586
           +I+
Sbjct: 597 QII 599


>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score =  101 bits (242), Expect = 6e-22
 Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
 Frame = +2

Query: 80  SKRNPEKEKEAQEWIEGVLGAKFPPGELFED----VLKDGTVLCQLINKLKPGSVPKINT 247
           +K + +   +A  WIEG+LG +   G+   D    VLKDG VLC++ NKL  G   KIN+
Sbjct: 62  AKYDSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKL--GGNIKINS 119

Query: 248 TGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEW 427
           +   FKMMEN   F       GVP  D+FQTVDL+EK+++  V++ + ALGR+ +   + 
Sbjct: 120 SKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK- 178

Query: 428 SGPCLGPKPADECKRDFSDEVLKAGQ 505
           +   LGPK A    R+F++E  +AGQ
Sbjct: 179 TCLALGPKEASANPREFTEEQRRAGQ 204


>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
          Length = 195

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
 Frame = +2

Query: 71  KIASKRNPEKEKEAQEWIEGVLGAK-FPPGELFEDV---LKDGTVLCQLINKLKPGSVPK 238
           KI  K +P++E+EA+ WIE VLG K F   E  +DV   LKDG +L +L  KL  G+  K
Sbjct: 17  KILEKYDPQQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIK 74

Query: 239 INTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRH 418
           +N     FK MENI NF S     GV   D FQT DL+   D A + S       +    
Sbjct: 75  VNEQNMPFKQMENIGNFLSHCGHLGVASGDQFQTADLY---DNANMTSCQLIKDLDI--- 128

Query: 419 AEWSGPCLGPKPADECKRDFSDEVLKAGQTVI 514
                P LGPK A+   R+F++E L+AG++++
Sbjct: 129 -----PTLGPKEAEANVREFTEEQLRAGESIL 155


>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
          Length = 172

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
 Frame = +2

Query: 44  MSLERQVRAKIASKRNP---EKEKEAQEWIEGVLGAKF--PPGELFEDVLKDGTVLCQLI 208
           +S E    +K    + P   ++ K  + WIEG     F     + F++ LK G VLC+L 
Sbjct: 45  VSKENLKTSKFIMSKKPWPMDRAKVVRMWIEGKTSCNFGGDTADDFQNTLKSGVVLCKLA 104

Query: 209 NKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 376
           N ++PG++ KIN     F MMENI NF + ++  GV     F T+DL+E K++ QV
Sbjct: 105 NAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTIDLFEGKNMHQV 160


>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
 Frame = +2

Query: 53  ERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELFEDVLKDGTVLCQL 205
           E+    ++ +K   E E  A+ W+E + G             PGE F + L+ G +LC++
Sbjct: 259 EKNNVGQVDAKYPKELEGNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKI 318

Query: 206 INKLKPGSVPKINTTGGQFKMMENITNF-QSAIKAYGVPDIDVFQTVDLWEKKDIAQV 376
            NK+K  ++PKI  +   F M ENI+ F     +  G+  +++FQTVDL+E++++  V
Sbjct: 319 ANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNVGMV 376



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
 Frame = +2

Query: 14  RXKALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELF 166
           R +   +  +  L  +V  KI SK + E E + ++W+E +LG             PGE F
Sbjct: 5   RRRGSNKHKSFGLTAEVNRKIQSKYDTELEMQCRDWLEKMLGENIEWGVETEYSRPGESF 64

Query: 167 EDVLKDGTVLC 199
            D + DG VLC
Sbjct: 65  ADGIFDGIVLC 75



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
 Frame = +2

Query: 203 LINKLKPGSVPKIN-TTGGQF---KMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKD 364
           ++N++ PG++ KI+   GG+F   +++ENI  F  A +   +    +D+F   DL+EK +
Sbjct: 203 VMNEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNN 262

Query: 365 IAQV 376
           + QV
Sbjct: 263 VGQV 266


>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 263

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
 Frame = +2

Query: 56  RQVRAKIASKRNPEKEKEAQEWIE--GVLGAKF----PPGELFE--DVLKDGTVLCQLIN 211
           R   A  +S R+ E+ K A++W+   GVL A      P   LF+    L+DG +LCQ+ N
Sbjct: 7   RTASALSSSGRDVEEWKMARDWMISIGVLPAHGRVTDPNFTLFDFAQSLRDGVLLCQVAN 66

Query: 212 KLKPGSVPKINTTG--GQFKMMENITNFQSA-IKAYGVPDIDVFQTVDLWEKKDIAQVVS 382
            L PG+V  +       QF  ++NI NF +A  + + + D D+F   +L++  D  +VV+
Sbjct: 67  VLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANELYDVSDFGKVVN 126

Query: 383 TLFAL 397
           TL  L
Sbjct: 127 TLSKL 131


>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 267

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +2

Query: 209 NKLKPGSVPKINTTGGQ--FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDI 367
           N ++PG + K +   G+  FKMMENI  F + IK+YGV +  +F TVDL+EK+++
Sbjct: 189 NAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243


>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
          Length = 89

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 30/83 (36%), Positives = 46/83 (55%)
 Frame = +2

Query: 263 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCL 442
           + MENI NF    ++ GV  +D+FQTVDL+EK+++A              R    + P L
Sbjct: 16  RKMENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA------------RAKGLNCPQL 63

Query: 443 GPKPADECKRDFSDEVLKAGQTV 511
           GPK A+   R F ++ L+AG+ +
Sbjct: 64  GPKEAEANPRSFDEDKLRAGKGI 86


>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
          Length = 209

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 28/83 (33%), Positives = 42/83 (50%)
 Frame = +2

Query: 107 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 286
           EA+ WIE      F   + F + L DG +LC+LI  +   SV +IN  G      +N++ 
Sbjct: 32  EARRWIERATFTPFKNDD-FRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSV 90

Query: 287 FQSAIKAYGVPDIDVFQTVDLWE 355
           F  A +A G+    +F+  DL E
Sbjct: 91  FFRACEALGLDKYQLFEHEDLDE 113


>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1011

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +2

Query: 227  SVPKINTTGGQFKMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKDIAQVVSTLFALG 400
            + P  N       M ENI NF +A +   +     D+FQTV L+E++++ QV+S + A  
Sbjct: 884  NTPSTNRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFA 943

Query: 401  RETYRH 418
            R+  +H
Sbjct: 944  RKVRKH 949


>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 422

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
 Frame = +2

Query: 176 LKDGTVLCQLINKLKPGSVPKINTTGG------QFKMMENITNFQSAIKAYGVPDIDVFQ 337
           L DG VLC L+N    G++P I+            K M+N+  F  A K  GV    +  
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395

Query: 338 TVDLWEKKDIAQVVSTLFAL 397
           + D+ ++K   +V +T+ AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415


>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 43

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +2

Query: 74  IASKRNPEKEKEAQEWIEGVLGAKFPPGE-LFEDVLKDGTVL 196
           +++K +P  + EA +WIE VLG K   G+ + EDVLKDG +L
Sbjct: 1   MSAKYDPVMDAEAVDWIEKVLGEKVCQGKSINEDVLKDGQIL 42


>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
          Length = 959

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
 Frame = +2

Query: 92  PEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKP---------------G 226
           P KE  A  WI  +LG +    + F  +L  G VLC+L N ++                G
Sbjct: 27  PLKEDLAS-WISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRG 85

Query: 227 SVPKINTT-------GGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 385
             P    T        G F   +N++NF    +   VPD+ +F+T DL   K+   V+ T
Sbjct: 86  LFPACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLT 145

Query: 386 LFALGRETYR 415
           L  + R+ ++
Sbjct: 146 LLEVARKAFK 155


>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
          Length = 819

 Score = 35.5 bits (78), Expect = 0.046
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +2

Query: 269 MENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 376
           M  I  F      +GV   D+FQTVDL+EK++I QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 59  QVRAKIASKRNPEKEKEAQEWIEGVLG 139
           ++  K+++K +P  + EA +WIE VLG
Sbjct: 671 ELSRKMSAKYDPVMDAEAVDWIEKVLG 697


>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
          Length = 820

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 164 FEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVP 319
           F+   +DG  +C+L+N L+PG +P                  Q+A  A+G+P
Sbjct: 449 FDTDWRDGMAICELVNALQPGLIPDSKYKEKTNSEATAKIGIQTAHDAFGIP 500


>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 37

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +2

Query: 434 PCLGPKPADECKRDFSDEVLKAGQTVI 514
           P LGPK A+   R+F++E L+AG++++
Sbjct: 10  PTLGPKEAEANVREFTEEQLRAGESIL 36


>SB_15403| Best HMM Match : CH (HMM E-Value=0)
          Length = 1907

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +2

Query: 38  HNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKL 217
           H+ S E QV        + ++++   +++   + A     +L+E V KDG +LC++IN  
Sbjct: 40  HSHSKEEQVAFADWINSSLKEDESVHKYLP--IDASEDSSDLYEKV-KDGILLCKMINLS 96

Query: 218 KPGSV 232
            PG++
Sbjct: 97  APGTI 101


>SB_56324| Best HMM Match : ASC (HMM E-Value=1.3e-14)
          Length = 416

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -2

Query: 252 PVVLILGTEPGFSLLMSWQRTVPSLRT--SSNSSPGGNLAPRTPSIHSWASFSFSGLRL 82
           P V I    P   +  SW  T P L    + N++PG    P     ++W  F  +G RL
Sbjct: 145 PAVTICNNNP---IRKSWAATTPYLPVIMAYNANPGEEAIPINWDAYNWTGFGGAGFRL 200


>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
          Length = 476

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +1

Query: 169 GCPQGRHCSLPAHQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRS 348
           G  QG  C L +          +++  + TVQ + EH K+ +  ++I   +      + +
Sbjct: 267 GKHQGHRCDLASRLATNV----REELSKITVQIEEEHEKIVMARRAIEARKEAITQKKEA 322

Query: 349 MGEK-RHRPSSQHTV 390
           +G+K  H+ S   TV
Sbjct: 323 LGQKIAHQASGIRTV 337


>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1480

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 633  LKINITLCWCCVHLPIKILRPAPRFCPD*VAPLLDPACRPITVC 502
            +++ + +C+ CVHL +++  P    C      +  P C  +  C
Sbjct: 1039 VRVCLPVCFSCVHLSVRVCLPVCFSCVHLSVRVCSPVCSRVFTC 1082



 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/55 (23%), Positives = 21/55 (38%)
 Frame = -2

Query: 666  VHYHTNLYKIILKINITLCWCCVHLPIKILRPAPRFCPD*VAPLLDPACRPITVC 502
            VH    +   +     T  + CVHL +++  P    C      +L P C  +  C
Sbjct: 1102 VHLSVRVLSPVCSRVFTCLYACVHLSVRVCLPVCFSCVHLSVRVLSPVCPRVFTC 1156


>SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 377

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 440 LGPKPADECKRDFSDEVLKAGQTVIG 517
           LGP P+D+  RDF    L++GQ V G
Sbjct: 233 LGPDPSDKKVRDFIWNTLQSGQVVPG 258


>SB_52622| Best HMM Match : Ank (HMM E-Value=1.2e-05)
          Length = 402

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 20  KALTQSHNMSLERQVRAKIASKRNPEKEKEAQEWI 124
           +A T+  N   + Q R KIA +R  + E+E QE+I
Sbjct: 252 RAKTEDKNRQSDFQEREKIARERTRQLEQEHQEYI 286


>SB_54206| Best HMM Match : SET (HMM E-Value=0.029)
          Length = 160

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 256 TVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRH 366
           TVQ D E H LP  N S   T H C PN   + + R+
Sbjct: 44  TVQVDKEKHILPASNLSY--TNHSCDPNAEFVFKPRN 78


>SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 356

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -2

Query: 432 PLHSACL*VSRPRANSVLTTWAMSFFSHRSTVWNTSMSGTPYALIADW 289
           PLH+  L  SR R   +  TW ++FF+    ++  ++       + DW
Sbjct: 134 PLHAGTLITSRRRYFLIAATWVIAFFNASPLLYTMTLDNNNLCQL-DW 180


>SB_15221| Best HMM Match : ASC (HMM E-Value=0.0016)
          Length = 490

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +2

Query: 5   LNTRXKALTQSHNMSLERQVRAKIASKRNPEKEKEAQE 118
           L  R  ALT+S N SL  +  A++A KRN +  KE +E
Sbjct: 361 LKERRGALTES-NTSLTVRYLAEVARKRNKKGHKEKRE 397


>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
          Length = 2532

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 119  WIEGVLGAKF--PPGELFEDVLKDGTVLCQLINKLKPGSVP 235
            ++ G +G K+  PP   FE +L+  T    +I  L PGS P
Sbjct: 1904 FVTGRMGEKYVTPPVLSFESILEQSTPFSPIIFILSPGSDP 1944


>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5222

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = +1

Query: 172  CPQGRHCSLPAHQQA--EAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCT 318
            CP G +C    H +     W CP+   H W     G +      +   +CT
Sbjct: 917  CPAGHYCIDGKHPEPCPAGWYCPEGTGHDWQPCPRGTYSPAQYLSHLGQCT 967


>SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 297

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 125 EGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTG 253
           +G LGA F P +LF   + +  +   ++N    G V +   TG
Sbjct: 73  QGSLGANFDPSKLFYGYMANLNIWANVLNDFNRGKVYEQGCTG 115


>SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012)
          Length = 558

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 393 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 506
           PS +R+ D  +   P  +  P+T   V   + S +PGK
Sbjct: 20  PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 57



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 393 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 506
           PS +R+ D  +   P  +  P+T   V   + S +PGK
Sbjct: 467 PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 504


>SB_42674| Best HMM Match : DUF26 (HMM E-Value=1)
          Length = 493

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +2

Query: 134 LGAKFPPGELFEDV--LKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKA 307
           L A  PP     DV  L  GT    L   LKP   PK+    G  + + +I  F S++ A
Sbjct: 89  LMATLPPTSTAHDVERLSTGTKFA-LRQWLKPIVAPKVCNNTGLHRPVAHIPPFTSSVAA 147

Query: 308 YGVPDIDVFQTVDLWEKKDIAQVVST 385
            G   I     +  W   D ++++ +
Sbjct: 148 QGKAPIKSVSALS-WPGTDQSEIMDS 172


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,901,087
Number of Sequences: 59808
Number of extensions: 584849
Number of successful extensions: 1632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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