Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30906
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.14 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 487 PAPTPKPTKQSDAKPKGKQTTFVNSLHEE 573
           P P P+PTK S  KP+  + T V    E+
Sbjct: 251 PTPKPRPTKVSRRKPRPPRPTQVEEEEEK 279


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 163 PGPTESYLRHHPNPAMRAPP 222
           P  T  Y R+HP P    PP
Sbjct: 167 PVYTHHYARYHPYPNFGVPP 186


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 451 ATKVFTAPTSKRPAPTPKPTKQSDAKP 531
           A K    P    P P P+PT+ ++++P
Sbjct: 385 ALKSDEIPPEPVPTPEPQPTQTTESEP 411


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 10  TSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPY 117
           T  PTSV   L P+  P     P  P    +++ PY
Sbjct: 312 TPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPY 347


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -1

Query: 422 SGRPSSCSARYVSDLAGSYCAAGLGGRGEVCCLIEFAMFCSEYRLIGELNCLCN 261
           S  P    A  V +     C  G+G  G+VC +   +   +  R +  L  LCN
Sbjct: 104 STNPCENQATCVQNKNQYQCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCN 157


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +1

Query: 439 SAPV-ATKVFTAPTSK---RPAPTPKPTKQSDAKPKGKQTTFVNS 561
           S+P+ A KV  +PT+     P P  + T   DA  K   T F ++
Sbjct: 83  SSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTST 127


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 560 HYTKNTFNSRIHSNASCSMYLG 625
           HY+KNT+N + +  A     LG
Sbjct: 345 HYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 560 HYTKNTFNSRIHSNASCSMYLG 625
           HY+KNT+N + +  A     LG
Sbjct: 237 HYSKNTYNEQGNKLADLYKSLG 258


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 244 LMKQKVLHKQFNSP 285
           L +Q +LH+QFN P
Sbjct: 628 LDRQGLLHRQFNLP 641


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 58  PNGYQDPKHPEEEVVSNWP 114
           PN    P  PEEE  S  P
Sbjct: 39  PNSAASPAPPEEEAASPTP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,443
Number of Sequences: 336
Number of extensions: 3868
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)