BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV30906 (818 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 33 0.064 SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 31 0.26 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.60 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.60 SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 29 0.79 SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 29 0.79 SPBC115.03 ||SPBC839.18c|gfo/idh/mocA family oxidoreductase |Sch... 29 0.79 SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 29 1.0 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 28 1.4 SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 2.4 SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 2.4 SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.4 SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 27 4.2 SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 4.2 SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 5.6 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.6 SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1 |Schizosa... 26 5.6 SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 7.4 SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 26 7.4 SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 7.4 SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 26 7.4 SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 9.8 SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 25 9.8 >SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex |Schizosaccharomyces pombe|chr 2|||Manual Length = 452 Score = 32.7 bits (71), Expect = 0.064 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%) Frame = +1 Query: 385 ETYRALQEDGLPDAATEL--SAPVATKVFTAPTSKRP---APTPKPTKQ---SDAKPKGK 540 ++ + ++E +PD E SAP +TK AP +K P +P PKP K +KPK Sbjct: 151 DSSKPIEEKPMPDLGAEQKESAPSSTK--PAPDAKEPEFSSPKPKPAKSEPVKQSKPKAT 208 Query: 541 QTTFVNSL--HEEHIQQSNSFKRL 606 +T +S +E+ ++ + R+ Sbjct: 209 ETARPSSFSRNEDRVKMNRMRLRI 232 >SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 413 Score = 30.7 bits (66), Expect = 0.26 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +1 Query: 409 DGLPDAATELSAPVATKVFTAPTSKRPAPTP-KPTKQSDAKPKGKQ-TTFVNSLHEEHIQ 582 D + +A+ +A V T+P S P P +P++Q K TTFV+S+H +Q Sbjct: 169 DSVSTSASSSNASNTVSV-TSPASSSATPLPNQPSQQQFLVSKNDAFTTFVHSVHNTPMQ 227 Query: 583 QS 588 QS Sbjct: 228 QS 229 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 29.5 bits (63), Expect = 0.60 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Frame = +1 Query: 325 RQQTSPLP-PRPAAQYDPAKSETYRALQEDGLPDAATE----LSAPVATKVFTAPTSKRP 489 RQ+ +P P P +A P + T + +Q A + +SA ++T PT + P Sbjct: 1253 RQKGTPSPAPVNSATSTPVAAPTAQQIQPGKQASAVSSNVPAVSASISTPPAVVPTVQHP 1312 Query: 490 APTPKPTKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRL 606 PT + + P T+F + + N F ++ Sbjct: 1313 QPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKM 1351 Score = 25.8 bits (54), Expect = 7.4 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Frame = +1 Query: 280 SPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATK 459 +P+ + + N+ ++P PP P +Q PA + AP Sbjct: 1456 APVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP 1515 Query: 460 VFTAPTSKRP-APTPKPTKQSDAKP 531 T P S+ A P P + P Sbjct: 1516 SSTLPPSQSSFAHVPSPAPPAPQHP 1540 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 29.5 bits (63), Expect = 0.60 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +1 Query: 346 PPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDA 525 PPRP A + + + + LP ++ +SA A KRP P P P++++ Sbjct: 271 PPRPIAPV--SMNPAINSTSKPPLPPPSSRVSAAAL-----AANKKRPPPPPPPSRRNRG 323 Query: 526 KP 531 KP Sbjct: 324 KP 325 >SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 29.1 bits (62), Expect = 0.79 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +1 Query: 100 VSNWP-YRTTPLVLPGAK-VRREPGPTESYLRHHP--NPAMRAPPNHDYRDTLMKQKVLH 267 V N+P Y+T P AK +EP + Y N + ++P ++Y H Sbjct: 409 VRNYPFYQTNQGSNPPAKRFTQEPPSSSLYSLSESSINYSTQSPMYYNYNYPQPSFPPFH 468 Query: 268 KQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYR 396 +N I YS+ N Q S PP+ +DP S+ YR Sbjct: 469 PIYNDSIGYYSQANPQMYYANQVSAPPPQ--GSFDP-NSKFYR 508 >SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces pombe|chr 2|||Manual Length = 522 Score = 29.1 bits (62), Expect = 0.79 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 14/102 (13%) Frame = +1 Query: 277 NSPINLYSEQNIANSIRQQTSPLPPRPA-AQYDPAKSETYRALQEDGLPD--AATELS-- 441 +S +NL ++ N AN + P RP ++ P S + AL DG PD AA + Sbjct: 412 DSTVNL-NQPNYAN-LTPTPQVSPKRPTYSRSSPLPSASVPALG-DGSPDPPAAPSIQNS 468 Query: 442 --------APVATKVFTAPT-SKRPAPTPKPTKQSDAKPKGK 540 P T+ +T P S P P KP+++S+ PK K Sbjct: 469 LSVHESEMPPHVTRDYTQPAASATPVPKEKPSEKSEKPPKKK 510 >SPBC115.03 ||SPBC839.18c|gfo/idh/mocA family oxidoreductase |Schizosaccharomyces pombe|chr 2|||Manual Length = 368 Score = 29.1 bits (62), Expect = 0.79 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Frame = +1 Query: 367 YDPAKSETYRALQ--EDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGK 540 +DP +S+ + ++ + G EL ++T P P+PTK + +G Sbjct: 265 FDPQESQLHSGMKPNDHGFGTDRFELYG----NLWTVPLDADVKALPEPTKITVPTVQGN 320 Query: 541 QTTFVNSLHEEHIQQSNSFKRLMFNVLGGHRILKMRRVTSFSA 669 F +++ EE ++++N F VL +I++ +S S+ Sbjct: 321 YRDFYDAVFEEILKKANEFPIKSDQVLAVEKIMEAAYKSSESS 363 >SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 878 Score = 28.7 bits (61), Expect = 1.0 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 1/100 (1%) Frame = +1 Query: 292 LYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATEL-SAPVATKVFT 468 L E + + + PP P P+K A +D LP AT+L + K Sbjct: 510 LQDEGRLEIDAKSSKTNTPPSPLLVGTPSKESLKEASSDDELPVLATKLVDNVIKEKSPL 569 Query: 469 APTSKRPAPTPKPTKQSDAKPKGKQTTFVNSLHEEHIQQS 588 + T K P+ K T +D K + VN L+ + +S Sbjct: 570 SLTPKVVVPSHKET-YTDEKKLIDELDRVNPLNSSQLLRS 608 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 28.3 bits (60), Expect = 1.4 Identities = 26/122 (21%), Positives = 42/122 (34%) Frame = +1 Query: 163 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSP 342 P PT+SY +++ P R +K K F P + + + ++P Sbjct: 72 PHPTKSYQQYYQKPTGNTVDEDKSRVPDFSKK---KSFVPPKPAIPKGKVLSLGGNTSAP 128 Query: 343 LPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSD 522 +P + + TE AP T T + P P PTK +D Sbjct: 129 KSTKPISISLGGTKAPTTTKPAAPAAQSKTETPAPKVTSESTKKETAAPPPQETPTKSAD 188 Query: 523 AK 528 A+ Sbjct: 189 AE 190 >SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Schizosaccharomyces pombe|chr 2|||Manual Length = 651 Score = 27.5 bits (58), Expect = 2.4 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Frame = +1 Query: 217 PPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPP------RPAAQYDPA 378 P N + + + QK +HK+F+ L + + + +PL P R AAQ DPA Sbjct: 552 PSNLSKKLSGLVQKKVHKKFDKDGRLKEISQFSKTTIKPETPLTPTTTPTPRTAAQEDPA 611 Query: 379 KSETYRALQEDG 414 + T +G Sbjct: 612 EETTDALASAEG 623 >SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 494 Score = 27.5 bits (58), Expect = 2.4 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 4/110 (3%) Frame = +1 Query: 277 NSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELS---AP 447 NS I S ++ ++S ++ P E Q D P+ E S +P Sbjct: 242 NSSITKSSPRSSSSSNNERFKDTSEESIIFTSPNTPEHPSVYQTDITPEIKLEHSDNNSP 301 Query: 448 VATKV-FTAPTSKRPAPTPKPTKQSDAKPKGKQTTFVNSLHEEHIQQSNS 594 ++ F PTSK P P +S + + + + +N L E+ SNS Sbjct: 302 SKPEIPFRHPTSKPLPPKPLSRSKSSSLSRNQTRSQLNDLSAENDSTSNS 351 >SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 27.5 bits (58), Expect = 2.4 Identities = 19/69 (27%), Positives = 25/69 (36%) Frame = +1 Query: 295 YSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAP 474 YS + Q T+ AAQY A + + T ++APVA P Sbjct: 336 YSTPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVP 395 Query: 475 TSKRPAPTP 501 PAP P Sbjct: 396 VPP-PAPAP 403 >SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 493 Score = 26.6 bits (56), Expect = 4.2 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = +1 Query: 376 AKSETYRALQED----GLPDAATEL-SAPVATKV-FTAPTSKRPAPTPKPTKQSDAKPKG 537 A SE LQ+D G+P EL + +++ + TS +P P +++ KP Sbjct: 416 AISEETEGLQDDEEYNGIPVDVNELLNVEFISQIPMSTETSSSSSPQPTEERKAKFKPSF 475 Query: 538 KQTTFVNSLHEEHIQ 582 Q TFV+ H + Sbjct: 476 TQGTFVSKRMRMHAE 490 >SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium transporting Cta4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1211 Score = 26.6 bits (56), Expect = 4.2 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +1 Query: 286 INLYSEQ-NIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKV 462 + +Y +Q +A T P+PP + P + +R ++GL +L A+ V Sbjct: 862 MGVYEKQIQLAKRFNLPTPPVPPALCHAFPPGPNNPHREKTQEGLNKVLEDLETKKASDV 921 >SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1334 Score = 26.2 bits (55), Expect = 5.6 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = +1 Query: 382 SETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKP 531 +E+ RA +E E + V+T F P P P PT++ KP Sbjct: 12 NESSRAYEEIFGAPRKREPARTVSTPAFMEPAPVSKKPLPPPTRRLPRKP 61 Score = 25.4 bits (53), Expect = 9.8 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +1 Query: 112 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQ 273 P PL P ++ R+P P S P+ APP H R+ + + H + Sbjct: 44 PVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQ-REASPVKNIEHSE 96 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 26.2 bits (55), Expect = 5.6 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +1 Query: 334 TSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTP-KPT 510 ++P PP P ++ P S A +P + + P+ +K P+S P P P Sbjct: 126 SAPAPPTPQSELRPPTS----APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181 Query: 511 KQSDAKP 531 K + P Sbjct: 182 KSPPSAP 188 >SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 466 Score = 26.2 bits (55), Expect = 5.6 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 603 PHVQCTWGTPNSKDATRDLLQRTNDCSMFLI 695 P C P+S+D T ++ ++ + SMFLI Sbjct: 422 PRNFCQTAPPHSRDITENMQRKFSSMSMFLI 452 >SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Manual Length = 462 Score = 25.8 bits (54), Expect = 7.4 Identities = 23/86 (26%), Positives = 32/86 (37%) Frame = -3 Query: 270 LVQHLLFHKGITVVVVRRCPHCWVGVMTQVTLCGARLPSDLSSREHERSGAVRPVADNFF 91 L+ HL + + + RCP V V+ L + L S G + A NF Sbjct: 76 LLSHLSLCQNLIEFLTARCPRLVV-VLPWTVL---QELDGLKSESSSTCGYLARQAHNFL 131 Query: 90 FRMFRILVSVREEVGVERHCYTCRYG 13 + FR VS V HC + G Sbjct: 132 LQCFRSNVSSLRGQKVHEHCSSTEKG 157 >SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosaccharomyces pombe|chr 1|||Manual Length = 614 Score = 25.8 bits (54), Expect = 7.4 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Frame = +1 Query: 16 IPTSVTMSLNPNFFPN-GYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRH 192 IP SV S NF Q+P + S P P+ +V ++P P + + Sbjct: 159 IPPSVEASSGQNFNQGIASQNPAISTSNLPSTTPLYIPPVNYGANQVSQQPNPQLPGVSN 218 Query: 193 HPNPAMRAPP 222 + NP+ + P Sbjct: 219 YYNPSATSKP 228 >SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2|||Manual Length = 1217 Score = 25.8 bits (54), Expect = 7.4 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Frame = +1 Query: 349 PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTP----KPTKQ 516 PRP Q PA A + +P AA AP+A V TA ++ P P +P Sbjct: 986 PRPVVQNKPA------ATKPVSMP-AAKSKPAPMANPVSTAQQTQNRPPAPAMQARPNTT 1038 Query: 517 SDAKPKGKQTTFV 555 A P TT + Sbjct: 1039 QAAAPVTSTTTTI 1051 >SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc7|Schizosaccharomyces pombe|chr 2|||Manual Length = 1062 Score = 25.8 bits (54), Expect = 7.4 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +1 Query: 295 YSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELS 441 ++ I+ S SPL AQ+DP+K R++ P LS Sbjct: 377 FNSDQISESNNFNASPLSTPLKAQFDPSKPALNRSIDHQKTPQHKRYLS 425 >SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 973 Score = 25.4 bits (53), Expect = 9.8 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = +3 Query: 120 HHSSRAPGS*GPKGAWPHRELPASSPQPSNEGTS*PRL--P*YPYETKGVAQAIQLSNQS 293 HHS+ + K ++ H + + + + TS PR PY V L N+ Sbjct: 89 HHSTSNTPTKKKKDSFDHASVTSLHRRSLSSNTSTPRKYHSRKPYSEPSVIDKEHLQNRV 148 Query: 294 ILGTEHCK--LYQA 329 +GT H + LYQ+ Sbjct: 149 SIGTTHTQNDLYQS 162 >SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharomyces pombe|chr 1|||Manual Length = 395 Score = 25.4 bits (53), Expect = 9.8 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +1 Query: 130 LVLPGAKVRR-EPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQ 306 L L GA V+R P P H N A R NH +++ + QF +P N + Sbjct: 147 LELLGAHVQRVTPAPIVDP-NHFVNTARRNAANHTVDESIPGKGYFANQFENPANWQAHF 205 Query: 307 N 309 N Sbjct: 206 N 206 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,079,593 Number of Sequences: 5004 Number of extensions: 63064 Number of successful extensions: 244 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 242 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 400438000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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