Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30906
(818 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04610.1 68416.m00493 KH domain-containing protein similar pu... 33 0.23
At5g38560.1 68418.m04662 protein kinase family protein contains ... 33 0.30
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 32 0.40
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 32 0.53
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 31 0.70
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.2
At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 30 1.6
At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 30 1.6
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 30 2.1
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 30 2.1
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 30 2.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 2.1
At5g56890.1 68418.m07099 protein kinase family protein contains ... 29 2.8
At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family... 29 2.8
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.8
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 29 2.8
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 29 2.8
At4g26760.1 68417.m03855 microtubule associated protein (MAP65/A... 29 4.9
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 4.9
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 4.9
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 4.9
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 29 4.9
At1g12970.1 68414.m01506 leucine-rich repeat family protein 29 4.9
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 28 6.5
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 28 6.5
At3g18990.1 68416.m02410 transcriptional factor B3 family protei... 28 6.5
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 28 6.5
At1g06760.1 68414.m00718 histone H1, putative similar to histone... 28 6.5
At4g30680.1 68417.m04349 MA3 domain-containing protein similar t... 28 8.6
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 28 8.6
At1g61660.1 68414.m06949 basic helix-loop-helix (bHLH) family pr... 28 8.6
>At3g04610.1 68416.m00493 KH domain-containing protein similar
putative nucleic acid binding protein GB:CAB39665
[Arabidopsis thaliana]; Pfam HMM hit: KH domain family
of RNA binding proteins
Length = 577
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 190 HHPNPAMRAPPNHD--YRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAA 363
H+P P M+ PP HD Y M+Q + KQ + I+ Y + N S PP A
Sbjct: 400 HNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMN---VHVSSAPPMVAQ 456
Query: 364 Q 366
Q
Sbjct: 457 Q 457
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +1
Query: 346 PPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDA 525
PP A PA +T + PDA+ AP T P+ P TP P ++ +
Sbjct: 98 PPSTPATTPPAPPQT---VSPPPPPDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPS 154
Query: 526 KPKGKQTT 549
PK +T
Sbjct: 155 PPKPSPST 162
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 337 SPLP-PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTS-KRPAPTPKPT 510
SP P P+P PA T Q P + + P A K P+ K PAPTPKP
Sbjct: 53 SPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
Query: 511 KQSDAKPK 534
PK
Sbjct: 113 PPHGPPPK 120
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 424 AATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQTTFVNSLHEEHIQQ 585
++T L+AP T+ P S +PT QSD + T S E+ +QQ
Sbjct: 99 SSTTLAAPSTTQSIAVPASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQ 152
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 31.5 bits (68), Expect = 0.70
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Frame = +1
Query: 139 PGAKVRREPGPTESYLRHHPNPAMRA--PPNHDYRDTLMKQKVLHKQFNSPINLY----S 300
P RR P + R P+P R P+ R L+++ SP LY S
Sbjct: 353 PSPPARRHRSPPPARRRRSPSPPARRRRSPSPPARRR-RSPSPLYRRNRSPSPLYRRNRS 411
Query: 301 EQNIANSIRQQTSPLPPRPAAQY-DPAKSETYRALQEDGLPDAATELSAPVATKVFTAPT 477
+A R + P P A+ DP + E LP S PVA ++ + P
Sbjct: 412 RSPLAKRGRSDSPGRSPSPVARLRDPTGARLPSPSIEQRLP------SPPVAQRLPSPPP 465
Query: 478 SKRPAPTPKPTKQSDAKP 531
+ P+P P ++ + P
Sbjct: 466 RRAGLPSPPPAQRLPSPP 483
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 334 TSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTK 513
T P PP P + + + + A LP ++T L AP P SK PAP P P
Sbjct: 679 TPPPPPPPPPKANISNAPKPPA--PPPLPPSSTRLGAPPPPP--PPPLSKTPAPPPPPLS 734
Query: 514 QSDAKP 531
++ P
Sbjct: 735 KTPVPP 740
>At1g75080.2 68414.m08720 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +1
Query: 253 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAAT 432
Q L F SPI Y ++S P P R + + S + L+ G+P +
Sbjct: 113 QSPLSSAFQSPIPSYQVSPSSSSF-----PSPSRGEPNNNMS-STFFPFLRNGGIPSSLP 166
Query: 433 EL----SAPVATKVFTAPTSKRPAPTP---KPTKQSDAKPKGKQTTF 552
L S PV V ++PTSK P P P KQS A K +F
Sbjct: 167 SLRISNSCPVTPPV-SSPTSKNPKPLPNWESIAKQSMAIAKQSMASF 212
>At1g75080.1 68414.m08719 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +1
Query: 253 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAAT 432
Q L F SPI Y ++S P P R + + S + L+ G+P +
Sbjct: 113 QSPLSSAFQSPIPSYQVSPSSSSF-----PSPSRGEPNNNMS-STFFPFLRNGGIPSSLP 166
Query: 433 EL----SAPVATKVFTAPTSKRPAPTP---KPTKQSDAKPKGKQTTF 552
L S PV V ++PTSK P P P KQS A K +F
Sbjct: 167 SLRISNSCPVTPPV-SSPTSKNPKPLPNWESIAKQSMAIAKQSMASF 212
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +1
Query: 340 PLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQS 519
P PP P + T+R+++ L + A P+ P P P P
Sbjct: 254 PPPPPPPVEVPQKPRRTHRSVRNRDLQENAKRSETKFKRTFQPPPSPPPPPPPPPPQPLI 313
Query: 520 DAKPKGKQTT 549
A P KQ T
Sbjct: 314 AATPPRKQGT 323
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +1
Query: 325 RQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPK 504
+ + +P PP+P P + A P K APT +P P P
Sbjct: 54 KPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTPPKPKPAPA 113
Query: 505 PTKQSDAKPK 534
P KPK
Sbjct: 114 PAPTPAPKPK 123
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +1
Query: 337 SPLPPRPAAQYDPAKSETYRA-LQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTK 513
+P P+PA P K + A P A P T T P K PAP P PT
Sbjct: 60 TPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTPPKPK-PAPAPAPTP 118
Query: 514 QSDAKPKGK 540
KP K
Sbjct: 119 APKPKPAPK 127
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 445 PVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQT 546
P K APT +P PTP PT KPK T
Sbjct: 28 PPKPKPAPAPTPPKPKPTPAPTPPK-PKPKPAPT 60
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 316 NSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAP 495
+S + SPLPP + + + +S + + + L D+ + P + ++P+ PAP
Sbjct: 108 SSSPEADSPLPPSSSPEANSPQSPA-SSPKPESLADSPSPPPPPPQPESPSSPSYPEPAP 166
Query: 496 TPKPT-KQSDAKPKGKQTTF 552
P P+ SD P+ + F
Sbjct: 167 VPAPSDDDSDDDPEPETEYF 186
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.9 bits (64), Expect = 2.1
Identities = 33/131 (25%), Positives = 45/131 (34%), Gaps = 8/131 (6%)
Frame = +1
Query: 163 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSP 342
P P Y+ P P + PP T ++Q SP Y + + +SP
Sbjct: 554 PSPPPPYIYSSPPPVVNCPPT-----TQSPPPPKYEQTPSPREYYPSPS-PPYYQYTSSP 607
Query: 343 LPPRPAAQYD--PAKSETYRALQEDGLPDAA---TELSAPVATKVFTAPTSKRPAPTP-- 501
PP A P TY A+Q P ++P V+ P + P P P
Sbjct: 608 PPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVY 667
Query: 502 -KPTKQSDAKP 531
P QS P
Sbjct: 668 YSPVTQSPPPP 678
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 29.5 bits (63), Expect = 2.8
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Frame = +1
Query: 163 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPI--NLYS--EQNIANSI-- 324
P T S + HHP+ P + ++ ++K+ SP+ +L S + N S+
Sbjct: 324 PDSTPSNVHHHPSSPSPPPLSSHHQHHQERKKIADSPAPSPLPPHLISPKKSNRKGSMTP 383
Query: 325 --RQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPT 498
+ +P PP P + PA + +++ + AP T+VF +S RP+ +
Sbjct: 384 PPQSHHAPSPPIPDSLISPAHAPVSFSMKR------ISPALAPSPTQVFPLRSSSRPSKS 437
Query: 499 PK 504
K
Sbjct: 438 RK 439
>At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 310
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 108 LAVPHHSSRAPGS*GPKGAW--PHRELPASSPQPSNEGTS*P 227
+A P +S P P A PH++ P S PQP+N + P
Sbjct: 1 MATPSPTSSPPSDSNPNSAATPPHQKQPPSPPQPTNPSSPPP 42
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 437 SSVAASGRPSSCSARYVSDLAGSYCAAGLGGRGEVC 330
S+ +G S + R +L CA+GLGG+G VC
Sbjct: 522 SAARFTGNGDSNNGRSKLELPEMSCASGLGGKGVVC 557
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 418 PDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPK--GKQTTFVNSLHEEHIQQSN 591
P T S P K P +K + TP +QSD K K GK+T S+ E++ Q
Sbjct: 16 PSGGTGASGP--KKRGRKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKY-SQWK 72
Query: 592 SFKRLMFNVLGGHRIL 639
++++ L H ++
Sbjct: 73 GLVPILYDWLANHNLV 88
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 6/112 (5%)
Frame = +1
Query: 58 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMR--APPNHD 231
P Y P P++ V P P P P + Y+ P P ++ +PP
Sbjct: 79 PPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 138
Query: 232 YRDTLMKQKVLHKQFNSPINLYSEQNIANS----IRQQTSPLPPRPAAQYDP 375
+ K+ ++K P+ YS + +S + PP P Y P
Sbjct: 139 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 190
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 6/112 (5%)
Frame = +1
Query: 58 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMR--APPNHD 231
P Y P P++ V P P P P + Y+ P P ++ +PP
Sbjct: 163 PPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 222
Query: 232 YRDTLMKQKVLHKQFNSPINLYSEQNIANS----IRQQTSPLPPRPAAQYDP 375
+ K+ ++K P+ YS + +S + PP P Y P
Sbjct: 223 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 274
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 6/112 (5%)
Frame = +1
Query: 58 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMR--APPNHD 231
P Y P P++ V P P P P + Y+ P P ++ +PP
Sbjct: 247 PPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVY 306
Query: 232 YRDTLMKQKVLHKQFNSPINLYSEQNIANS----IRQQTSPLPPRPAAQYDP 375
+ K+ ++K P+ YS + +S + PP P Y P
Sbjct: 307 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 358
>At4g26760.1 68417.m03855 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 578
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 501 ETDEAVRR--ETERKTNDLRKFTTRRTHSTVEFIQTPHVQC 617
ETD +++R + +RK +L+K + R +EF+ T H C
Sbjct: 152 ETDLSLKRLDDFQRKLQELQKEKSDRLQKVLEFVSTVHDLC 192
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 58 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPP 222
P+ P+ P+E N PY +P+ K RR P P + P+P PP
Sbjct: 463 PSPVHKPQPPKESPQPNDPYDQSPV-----KFRRSPPPPPVHSPPPPSPIHSPPP 512
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 QQTSPLPPRPAAQYDPAKSET-YRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPK 504
Q SP+ PA P K + ++ + P A +P + V T P PAP+P
Sbjct: 157 QAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQDTAPAPSPN 216
Query: 505 PTKQSDAKPKGKQTTFVNS 561
+ + KG+ ++N+
Sbjct: 217 TGGNALNQLKGRAVMWLNT 235
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/90 (24%), Positives = 35/90 (38%)
Frame = +1
Query: 328 QQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKP 507
Q T P P A+ + + Q P +T SA + T P+ PAP +P
Sbjct: 558 QSTCPSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSA--VPEASTIPSPPAPAPVAQP 615
Query: 508 TKQSDAKPKGKQTTFVNSLHEEHIQQSNSF 597
T + P +QT + + + +SF
Sbjct: 616 THVFNQTPPPEQTPKSGAARTDSEPEVSSF 645
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 310 IANSI-RQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAP-VATKVFTAPTSK 483
+A+S+ Q P P P S++ RA P A SAP A V PT
Sbjct: 15 VASSVVAQAPGPAPTISPLPATPTPSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTES 74
Query: 484 RPAPTPKPTKQSDA 525
PAP P T S A
Sbjct: 75 PPAP-PTSTSPSGA 87
>At1g12970.1 68414.m01506 leucine-rich repeat family protein
Length = 464
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +1
Query: 169 PTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYS-EQNIANSIRQQT--- 336
P SY+ HH +PA APP+ + +L + L +P + S ++I ++I Q
Sbjct: 9 PLLSYVLHHSDPASHAPPSLAIQQSLANRYPL---LTNPYVISSLIESIPSTITQTLFVF 65
Query: 337 SPLPPRP-AAQYDPAKSETYRALQEDGL--PDAATE 435
L PRP A+S+ + D L DAA E
Sbjct: 66 GSLGPRPDPLAVSSARSKIREIKENDSLSPEDAAKE 101
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +1
Query: 163 PGPTESYL--RHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLY-SEQNIANSIRQQ 333
P P + Y H+P P + PP Y + K K + PI Y + I++
Sbjct: 147 PPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKYPPPEK-YPPPIKKYPPPEQYPPPIKKY 205
Query: 334 TSPLPPRPAAQYDPAKSETY 393
P+ P + P +TY
Sbjct: 206 PPPIKKYPPPEEYPPPIKTY 225
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 370 DPAKSETYRALQEDGLPDAATELSAPVAT-KVFTAPTSKRP---APTPKPTKQSDAKPKG 537
+P + T DG +++ ++ V+ +FT PTS P P P+PT+ K K
Sbjct: 331 EPQNTSTPPPTNSDGSFESSDDVWLTVSEIPLFTQPTSAPPPTRPPPPRPTR--PIKKKV 388
Query: 538 KQTTFVNSLHEEHIQQS 588
+ + S + H+ S
Sbjct: 389 NEPSIPTSAYHSHVPSS 405
>At3g18990.1 68416.m02410 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 341
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 400 LQEDGLPDAATELSAPVATKVFTAPT-SKRPAPTPKPTKQSDAKPKGKQTTFVNS 561
L E +P S+ + T +FT P ++ P PTPK K+ K K +NS
Sbjct: 144 LPESTVPANKGYASSAIQT-LFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINS 197
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Frame = +1
Query: 190 HHPNPAMRA--PPNHDYRDTLMKQKVLHKQFNSPINLYSEQNI-----ANSIRQQTSPLP 348
HHP P PP + +T H F P + NI A + QTSP+P
Sbjct: 12 HHPPPPQFTSFPP---FTNTNPFASPNHPFFTGPTAVAPPNNIHLYQAAPPQQPQTSPVP 68
Query: 349 PRPAAQYDPAKSETYRALQEDGLPDAATE 435
P P+ + P A+ PD +++
Sbjct: 69 PHPSISHPPYSDMICTAIAALNEPDGSSK 97
>At1g06760.1 68414.m00718 histone H1, putative similar to histone
H1-1 GB:CAA44312 GI:16314 from [Arabidopsis thaliana];
identical to cDNA H1-1C mRNA for histone H1-1 (partial)
GI:732560
Length = 274
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 415 LPDAATELSAPVATKVFTAPTSKRPA--PTPKPTKQSDAKPKGKQTTFV 555
LP A+ + S+P A +AP K+PA K ++ A K K+T V
Sbjct: 128 LPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAV 176
>At4g30680.1 68417.m04349 MA3 domain-containing protein similar to
SP|Q03387 Eukaryotic initiation factor (iso)4F subunit
P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum};
contains Pfam profile PF02847: MA3 domain
Length = 263
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 478 SKRPAPTPKPTKQSDAKPK 534
S++P P P PT+Q+ KPK
Sbjct: 65 SQQPKPVPSPTRQTVEKPK 83
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 27.9 bits (59), Expect = 8.6
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +1
Query: 172 TESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPL-P 348
TE + P P + P+ +T ++ ++ Q +SP L S+ N R Q+ P+ P
Sbjct: 194 TEEF-ESQPKPPLL--PSKSIDETRLRSPLM-SQASSPPPLPSKSIDENETRSQSPPISP 249
Query: 349 PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQ 516
P+ Q A+S+T+ + + L +P A++ SK P P P PT Q
Sbjct: 250 PKSDKQ---ARSQTHSS-------PSPPPLLSPKASENHQ---SKSPMPPPSPTAQ 292
>At1g61660.1 68414.m06949 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 393
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 88 EEEVVSNWPYRTTPLVLPGAKVRREPGPTE-SYLRHHPNPAMRAPPNHDYRDTLMKQKVL 264
+ E + P TTP LP KVR+E + + L+ +P + ++ + K L
Sbjct: 260 DNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFL 319
Query: 265 HKQFNSPINLYSEQNIANSIRQQTS 339
H Q Y +Q +N +QQ S
Sbjct: 320 HDQVTVLSTPYMKQGASNQQQQQIS 344
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,417,032
Number of Sequences: 28952
Number of extensions: 346522
Number of successful extensions: 1381
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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