Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30904
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 438 e-123
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 438 e-123
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 438 e-123
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 438 e-123
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 438 e-123
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 438 e-123
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 437 e-123
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 437 e-123
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 437 e-123
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 437 e-123
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 419 e-118
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 260 8e-70
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 253 9e-68
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 169 1e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 5e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 79 3e-15
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 79 3e-15
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 79 3e-15
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 73 1e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 71 9e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 71 9e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.40
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.52
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.52
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 438 bits (1080), Expect = e-123
Identities = 205/211 (97%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 438 bits (1080), Expect = e-123
Identities = 205/211 (97%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 438 bits (1079), Expect = e-123
Identities = 204/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 438 bits (1079), Expect = e-123
Identities = 204/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 68 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 127
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 128 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 187
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 188 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 218
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 438 bits (1079), Expect = e-123
Identities = 204/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 38 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 97
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 98 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 157
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 158 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 217
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 218 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 248
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 438 bits (1079), Expect = e-123
Identities = 204/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEAL
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAL 262
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 437 bits (1077), Expect = e-123
Identities = 203/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 437 bits (1077), Expect = e-123
Identities = 203/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 437 bits (1077), Expect = e-123
Identities = 203/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 437 bits (1077), Expect = e-123
Identities = 203/211 (96%), Positives = 211/211 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVIT+GNERFRCPEA+
Sbjct: 232 ASSSSLEKSYELPDGQVITVGNERFRCPEAM 262
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 419 bits (1033), Expect = e-118
Identities = 194/211 (91%), Positives = 205/211 (97%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 182
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 110
Query: 183 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 362
NPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYA
Sbjct: 111 NPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYA 170
Query: 363 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 542
LPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A A
Sbjct: 171 LPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAA 230
Query: 543 AASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A+S+SLEKSYELPDGQVITIGNERFRCPE L
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEVL 261
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 260 bits (636), Expect = 8e-70
Identities = 119/212 (56%), Positives = 157/212 (74%), Gaps = 1/212 (0%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 179
D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 180 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 359
LNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGF 173
Query: 360 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 539
A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+ALD T
Sbjct: 174 AMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PT 228
Query: 540 AAASTSLEKSYELPDGQVITIGNERFRCPEAL 635
+ S++ SY LPD I I N FR PE L
Sbjct: 229 KVENNSVKSSYALPDTTKIEISNSLFRAPEVL 260
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 253 bits (619), Expect = 9e-68
Identities = 116/212 (54%), Positives = 153/212 (72%), Gaps = 1/212 (0%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAP 179
D VG+E R +L + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE P
Sbjct: 54 DLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPP 113
Query: 180 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 359
LNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+
Sbjct: 114 LNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGF 173
Query: 360 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 539
AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE
Sbjct: 174 ALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERL 233
Query: 540 AAASTSLEKSYELPDGQVITIGNERFRCPEAL 635
A +T L + Y LPDG+VI +G ERF PE L
Sbjct: 234 ALETTVLSQQYTLPDGRVIRLGGERFEAPEIL 265
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 169 bits (412), Expect = 1e-42
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Frame = +3
Query: 3 DSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 179
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 180 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 335
LN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H
Sbjct: 124 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTH 183
Query: 336 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 515
+P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV
Sbjct: 184 CIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCP 243
Query: 516 DFEQE 530
D +E
Sbjct: 244 DVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 5e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +3
Query: 63 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 242
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 243 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 422
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 423 KILTER 440
++L ++
Sbjct: 214 QMLDQQ 219
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 107
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 107
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 107
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 73.3 bits (172), Expect = 1e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +3
Query: 3 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 98
DSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 70.5 bits (165), Expect = 9e-13
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Frame = +3
Query: 18 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 197
+E K + ++ PIE G + NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 198 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYAL 365
+ ++I+F+ F ++ + L S + +V+DSG + G +
Sbjct: 107 PDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLI 166
Query: 366 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 545
+++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 167 QDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEAR 224
Query: 546 ---ASTSLEKSYELPD 584
+ K Y +PD
Sbjct: 225 NRFQENTTMKRYIMPD 240
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 70.5 bits (165), Expect = 9e-13
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Frame = +3
Query: 18 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 197
+E K + ++ PIE G + NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 198 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYAL 365
+ ++I+F+ F ++ + L S + +V+DSG + G +
Sbjct: 107 PDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLI 166
Query: 366 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 545
+++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 167 QDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEAR 224
Query: 546 ---ASTSLEKSYELPD 584
+ K Y +PD
Sbjct: 225 NRFQGNTTMKRYIMPD 240
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 69.7 bits (163), Expect = 2e-12
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Frame = +3
Query: 129 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 308
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 309 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 479
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 480 RDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEAL 635
R E+ YV D+++E + T SL+ P Q I N RF C E L
Sbjct: 385 RFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGL 439
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 328 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 233
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.52
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 15 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 194
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 195 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 347
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 473 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 339
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 335 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 514
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 515 RLRAG 529
+ AG
Sbjct: 130 QTDAG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,537,080
Number of Sequences: 27780
Number of extensions: 240438
Number of successful extensions: 889
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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