Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30902
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0606 - 4461646-4462623                                           29   3.4  
09_04_0362 - 16953108-16953155,16953478-16953562,16953626-169537...    28   7.8  

>03_01_0606 - 4461646-4462623
          Length = 325

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 326 AYRLAGGACVWCAHPSTFSGQSQTFSLGLNT 234
           AY   GG+C+W    ST +  + T+S   +T
Sbjct: 209 AYTAVGGSCIWMTVQSTVAAAAGTYSFDTST 239


>09_04_0362 -
           16953108-16953155,16953478-16953562,16953626-16953702,
           16954601-16954641,16955140-16955644,16955897-16956316
          Length = 391

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 290 AHPSTFSGQSQTFSLGLNTRLDGHGMWCFRSPSHM*YMVQSAWSLW 153
           A  S+F G S   S+  + +L  HG WC    S+  Y + +A   W
Sbjct: 313 ASGSSFGGTSLLGSMHRDGQLQHHGDWCGIDASYSRYHLTNARCAW 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,733,677
Number of Sequences: 37544
Number of extensions: 349072
Number of successful extensions: 723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)