Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30902
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 2e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 2e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 42 5e-04
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 35 0.061
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 34 0.14
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.32
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 31 0.75
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 31 0.75
U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine rece... 31 1.3
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 142 HISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCA 291
H S+ D +C ++Y C RK M CPS VFNP +VCDWP V C+
Sbjct: 1248 HGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCS 1297
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 94 YTTKDPTEVTCEEEDGHISYHKDQADCTMYYMC-EGERKHHMPCPSNLVFNPNENVCDWP 270
YT+ D + +EDG ++++ DC+ C GE H C S+L FN CD+P
Sbjct: 1173 YTSNDQSAFCDGKEDG---LYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYP 1229
Query: 271 ENVEGCAHHTQ 303
+ V GC +H Q
Sbjct: 1230 QKVSGCENHGQ 1240
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 178 MYYMCEGERKHHMPCPSNLVFNPNENVCDW 267
++Y C CP VFN N+ CD+
Sbjct: 208 VFYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 130 EEDGHISYHKDQADCT-MYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCAHHTQ 303
E DG+IS +++C+ +++ C H CP+NLVFNP + CDWP+NV C+ ++
Sbjct: 180 ESDGNIS----KSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSE 234
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 169 DCTMYYM-CEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
DCT + C+ R++ CP +LVFN N +CD+PE C
Sbjct: 321 DCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Score = 35.9 bits (79), Expect = 0.035
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C +M CP +LV++ N CDW NV C
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFEC 77
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 124 CEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
C E DG+ S+ + + + C M CP L+F+ +CD+ NV+ C
Sbjct: 239 CGEVDGYFSFGRCSSS---FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +1
Query: 115 EVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCA 291
E TCE + I H + T + C G M CP++LVFNP VCDWP +V CA
Sbjct: 244 EPTCEGKADGI--HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C G M CP++L++N +CDW NV GC
Sbjct: 41 FLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGC 76
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 88 GQYTTKDPTEVTCEE-EDGHISYHKDQADCTMYYM-CEGERKHHMPCPSNLVFNPNENVC 261
G + ++ E CE EDG S CT YY C + CP+ L ++ + C
Sbjct: 126 GSGSGEETVENVCENLEDGAYS----SGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Query: 262 DWPENVEGC 288
W VE C
Sbjct: 182 IWKSLVEEC 190
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 109 PT-EVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEG 285
PT + TCEE DG+ S+ + + T C R M CP+ L F+ + CD+ NV
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTA---CTNGRAIVMFCPAGLKFSESTVRCDYESNVSE 358
Query: 286 C 288
C
Sbjct: 359 C 359
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 190 CEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
C+ CPS+LVFN +CD+P+ C
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +1
Query: 115 EVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCA 291
E TCE + I H + T + C G M CP++LVFNP VCDWP +V CA
Sbjct: 244 EPTCEGKADGI--HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C G M CP++L++N +CDW NV GC
Sbjct: 41 FLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGC 76
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 88 GQYTTKDPTEVTCEE-EDGHISYHKDQADCTMYYM-CEGERKHHMPCPSNLVFNPNENVC 261
G + ++ E CE EDG S CT YY C + CP+ L ++ + C
Sbjct: 126 GSGSGEETVENVCENLEDGAYS----SGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Query: 262 DWPENVEGC 288
W VE C
Sbjct: 182 IWKSLVEEC 190
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 109 PT-EVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEG 285
PT + TCEE DG+ S+ + + T C R M CP+ L F+ + CD+ NV
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTA---CTNGRAIVMFCPAGLKFSESTVRCDYESNVSE 358
Query: 286 C 288
C
Sbjct: 359 C 359
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 190 CEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
C+ CPS+LVFN +CD+P+ C
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 94 YTTKDPTEVTCEEED---GHIS--YHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENV 258
YTT+ P T +D H++ H +++Y+C + CP+NL+FNP
Sbjct: 557 YTTQAPVTTTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGE 616
Query: 259 CDWPENVEGC 288
CD+ NV C
Sbjct: 617 CDYSTNVRDC 626
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 169 DCTMYYM-CEGERKHHMPCPSNLVFNPNENVCDWPENVEGCAHH 297
DC Y + C + PCPS L ++ ++ CD ENVEGC +
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEY 743
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 DQADCTMYY-MCEGERKHHMPCPSNLVFNPNENVCDWPENVEGCAHH 297
D C+ Y+ C + CP L++ ++N+CD+PE+V+ C +
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPEY 259
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 172 CTM-YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVE 282
CT ++ C R CP +LVFN CD+ EN E
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 169 DCTMYYM-CEGERKHHMPCPSNLVFNPNENVCDWPENVEGCAHH 297
DC YY+ C CP+ L ++ N CD+ E+VE C +
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEY 842
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 97 TTKDPTEVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCD 264
TT P C+E GH Y D +C +Y C C +++ ++ CD
Sbjct: 147 TTTTPYYGACKESAGHDGYKPDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTCD 202
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -1
Query: 431 VHLLERIKTKTKTGIYEQFCLDLDAKADVGRCGPGAYR--LAGGACVWCAHPSTFSGQSQ 258
V+L E +KT KTGI E C D AD + G Y ++G CA P SG +
Sbjct: 849 VNLQEIVKTSEKTGITET-C-DTRCTADFCQNGAKCYEDFVSGMPFCQCAFPDVHSGVNC 906
Query: 257 TFSLGLNTRLDGHG 216
+ N+ + HG
Sbjct: 907 EIDINTNSSVSFHG 920
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 97 TTKDPTEVTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPE 273
TT+ PT T + + +DC + C ++ CP+ L F+ + +CD P+
Sbjct: 553 TTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C G M CP++L+++P C++ NV C
Sbjct: 78 FLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C G M CP++L+++P C++ NV C
Sbjct: 78 FLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 64 PYET-VLTSGQYTTKDPTEVTCE-EEDGHISYHKDQADCTMYYM-CEGERKHHMPCPSNL 234
PY T + + T+ +C + DG S+ +C+ +Y C M CP+ L
Sbjct: 193 PYTTGAPAADEPVTRSAVTKSCVGKADGFYSF----GECSDHYTACSNGYLIPMQCPARL 248
Query: 235 VFNPNENVCDWPENVEGCAH 294
F+ +CD+ NV C +
Sbjct: 249 AFDEARVICDYVMNVPECTN 268
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 181 YYMCEGERKHHMPCPSNLVFNPNENVCDWPENVEGC 288
+ C G M CP++L+++P C++ NV C
Sbjct: 78 FLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 64 PYET-VLTSGQYTTKDPTEVTCE-EEDGHISYHKDQADCTMYYM-CEGERKHHMPCPSNL 234
PY T + + T+ +C + DG S+ +C+ +Y C M CP+ L
Sbjct: 193 PYTTGAPAADEPVTRSAVTKSCVGKADGFYSF----GECSDHYTACSNGYLIPMQCPARL 248
Query: 235 VFNPNENVCDWPENVEGCAH 294
F+ +CD+ NV C +
Sbjct: 249 AFDEARVICDYVMNVPECTN 268
>U41263-6|AAC24432.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 26 protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 451 ICMCSSCMRFYNWFTWMTHLVHSNNIFNSLLQRFIV*AYIILRLLSQ*SYTIFIWLNQIV 630
+C+ S + Y +F + + NNIF++ + ++ + + + + + + + QI
Sbjct: 32 VCIISIIIISYYFFYLVVKTLIKNNIFSNCTRALLI--FCSINSIVHQTTMMEVRIRQIY 89
Query: 631 RCDITFQCEILDFLFNKIIKFPILYFYIKLSYFS 732
R I F + LFN LYFY +YFS
Sbjct: 90 R-SIVFDEDHCHILFNSSECVFELYFYYMTNYFS 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,783,561
Number of Sequences: 27780
Number of extensions: 338061
Number of successful extensions: 1047
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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