Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30902
         (818 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g53100.1 68416.m05852 GDSL-motif lipase/hydrolase family prot...    29   4.9  
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera...    28   8.6  

>At3g53100.1 68416.m05852 GDSL-motif lipase/hydrolase family protein
           similar to  family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382) [Arabidopsis thaliana], SP|P40603
           Anther-specific proline-rich protein APG {Brassica
           napus}; contains InterPro Entry IPR001087 Lipolytic
           enzyme, G-D-S-L family
          Length = 351

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 530 STPYFNVSLSKPILFYGYYHNKVTRYL 610
           S P+ ++SL++ + +Y  Y N+VTR +
Sbjct: 121 SVPFGSISLTRQLSYYRAYQNRVTRMI 147


>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 451

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +1

Query: 118 VTCEEEDGHISYHKDQADCTMYYMCEGERKHHMPCPSNLVFNPNENVCDWPENVE 282
           ++CEE D   S  + + D  +     G    H P  S+ +F P+E    W +  E
Sbjct: 209 MSCEELDQD-SLSQSREDFKVPIFAIGPSHSHFPASSSSLFTPDETCIPWLDRQE 262


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,316,070
Number of Sequences: 28952
Number of extensions: 290682
Number of successful extensions: 661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)