Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30901
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    29   5.2  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    29   5.2  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    29   5.2  

>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 222  SYQY*QVTSLTECRCIPLGFTGGRTSCE 139
            +Y + QV    EC C P+G   G + C+
Sbjct: 1454 TYGFHQVIGCEECACNPMGIANGNSQCD 1481


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 222  SYQY*QVTSLTECRCIPLGFTGGRTSCE 139
            +Y + QV    EC C P+G   G + C+
Sbjct: 1454 TYGFHQVIGCEECACNPMGIANGNSQCD 1481


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 222  SYQY*QVTSLTECRCIPLGFTGGRTSCE 139
            +Y + QV    EC C P+G   G + C+
Sbjct: 1454 TYGFHQVIGCEECACNPMGIANGNSQCD 1481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,669,733
Number of Sequences: 53049
Number of extensions: 635058
Number of successful extensions: 1090
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)