Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30901
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.    28   6.3  
Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical p...    28   6.3  
AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical ...    28   6.3  

>Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical
           protein C15A7.4 protein.
          Length = 404

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 513 KVHDLKLMGSSMNMRFMTFQTFYFTA 590
           +VHDL LMG   N+ F TF   YFTA
Sbjct: 224 RVHDLHLMGVESNI-FYTFANTYFTA 248


>Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
 Frame = -3

Query: 333 VERSL---HNS--CR*QLSLHHY-KITSFTVYTIL 247
           +E+SL   HN   C  Q+SLHHY K+ SF ++ +L
Sbjct: 360 IEKSLESRHNGIKCLTQISLHHYKKLRSFEIFRLL 394


>Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
 Frame = -3

Query: 333 VERSL---HNS--CR*QLSLHHY-KITSFTVYTIL 247
           +E+SL   HN   C  Q+SLHHY K+ SF ++ +L
Sbjct: 360 IEKSLESRHNGIKCLTQISLHHYKKLRSFEIFRLL 394


>AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
 Frame = -3

Query: 333 VERSL---HNS--CR*QLSLHHY-KITSFTVYTIL 247
           +E+SL   HN   C  Q+SLHHY K+ SF ++ +L
Sbjct: 360 IEKSLESRHNGIKCLTQISLHHYKKLRSFEIFRLL 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,518,323
Number of Sequences: 27780
Number of extensions: 340527
Number of successful extensions: 769
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)