Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30897
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 388 e-109
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 236 2e-63
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 212 4e-56
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 139 4e-34
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 94 1e-20
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 81 2e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 64 2e-11
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 56 6e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 53 3e-08
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 36 0.005
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 3.1
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 25 9.3
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 9.3
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 388 bits (954), Expect = e-109
Identities = 183/205 (89%), Positives = 194/205 (94%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPK+NREKMTQI+FETFN+PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGY
Sbjct: 110 LNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGY 169
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+ T
Sbjct: 170 ALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQT 229
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA S+SLEKSYELPDGQVITIGNERFR PEALFQPS LG+E+ GIHE YNSIMKCDVDI
Sbjct: 230 AAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSALGLENAGIHEATYNSIMKCDVDI 289
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLY N VMSGGTTMYPGIADRMQ
Sbjct: 290 RKDLYGNVVMSGGTTMYPGIADRMQ 314
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 236 bits (577), Expect = 2e-63
Identities = 107/205 (52%), Positives = 148/205 (72%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE
Sbjct: 110 MNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESV 169
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E +
Sbjct: 170 VLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKL 229
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ +T L ++Y LPDG+VI +G+ER+ CPE LFQP +G E G+ E ++++I DVDI
Sbjct: 230 SEETTVLMRNYTLPDGRVIKVGSERYECPECLFQPHLVGSEQPGLSEFIFDTIQAADVDI 289
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RK LY V+SGG++MY G+ R++
Sbjct: 290 RKYLYRAIVLSGGSSMYAGLPSRLE 314
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 212 bits (517), Expect = 4e-56
Identities = 94/198 (47%), Positives = 138/198 (69%)
Frame = +3
Query: 45 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 224
N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P A
Sbjct: 120 NKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSA 179
Query: 225 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 404
I + ++ GRD+TDYL L + G+ ++AE+EIVR+IKEK CYVA DF E+ +
Sbjct: 180 IQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHK 239
Query: 405 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 584
+Y+LPD Q IT+G E F PE LF P +G E+ G+H ++ SI+ D+D+R LY
Sbjct: 240 PQIHTYQLPDNQTITLGTECFSAPEVLFNPEMMGSEASGLHIQLFKSILLSDIDLRSTLY 299
Query: 585 ANTVMSGGTTMYPGIADR 638
+N V+SGG+T+ G +R
Sbjct: 300 SNIVLSGGSTLLRGFGER 317
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 139 bits (336), Expect = 4e-34
Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 15/220 (6%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 185
LNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 186 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYV 359
+P+ EGY + +I + LAGRD+T ++ +L +R S TAER IKE+ CYV
Sbjct: 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYV 247
Query: 360 ALDFEQEMA--TAAASTSLEKSYELPDGQ--VITIGNERFRCPEALFQPSFLGME-SCGI 524
D +E + L+ + E G I +G ERF PE F P + +
Sbjct: 248 CPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPL 307
Query: 525 HETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
E V N + +D+RK LY N V+SGG+T++ +R+Q
Sbjct: 308 PELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 94.3 bits (224), Expect = 1e-20
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Frame = +3
Query: 153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 332
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 333 DIKEKLCYVALDFEQEMATA--AASTSLEKSYELPD------------------GQVITI 452
+IKE +CYV+ +F+++M + LE Y LPD QV+ +
Sbjct: 217 EIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQVLNL 276
Query: 453 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 632
NERF PE LF PS + + GI E V S+ +I+ L N V GG +PG
Sbjct: 277 SNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLLENVVTIGGNCKFPGFH 336
Query: 633 DRM 641
R+
Sbjct: 337 KRL 339
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 80.6 bits (190), Expect = 2e-16
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Frame = +3
Query: 297 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCP 476
S+ +R ++ + KE + V + A AS+ K +E PDG G ERFR
Sbjct: 243 SYEIFQKRRVIEEWKESVLDV---LDTPFDEAKASSRNPKPFEFPDGVTHKFGQERFRIS 299
Query: 477 EALFQPSFLGMESC---------GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 629
E LF PSF S G+HE VY SI+ CD ++R L N V++GGT++ PG+
Sbjct: 300 EILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSELRSPLLNNIVVTGGTSLIPGL 359
Query: 630 ADRMQ 644
++R+Q
Sbjct: 360 SERLQ 364
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/90 (25%), Positives = 46/90 (51%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 212
NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G
Sbjct: 112 NPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLI 171
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGYSF 302
+ I + LAG L + ++ F
Sbjct: 172 IRKGIFKQSLAGDFLNANIEQLFNTMNIEF 201
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 64.1 bits (149), Expect = 2e-11
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 206
NP R MT+++FE +N+P++ I + S Y + + ++GIVL+ G+ SH +P+ G
Sbjct: 126 NPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
Query: 207 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 386
+ R+ G + YL+K+ + SF + C+V+ D+ ++A
Sbjct: 186 ERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIA 245
Query: 387 TAAASTSLEK 416
A LE+
Sbjct: 246 HALDRDILER 255
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 459 ERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADR 638
E+ R PE +F PS +G++ GI E + + + + ++ ++ L +N +++GG PG+ R
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETR 653
Query: 639 MQ 644
++
Sbjct: 654 IK 655
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 55.6 bits (128), Expect = 6e-09
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 212
NP NR K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+
Sbjct: 109 NPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFV 168
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGY 296
L +G + D L + L ++ +
Sbjct: 169 LQKGYQVQHFSGNAINDILAQTLRDKNF 196
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 519 GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
GI + N I +CDVDIR L N ++ GGT++ G + R+Q
Sbjct: 326 GIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQ 367
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 53.2 bits (122), Expect = 3e-08
Identities = 31/100 (31%), Positives = 49/100 (49%)
Frame = +3
Query: 45 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 224
+RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 161 DRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTA 220
Query: 225 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 344
+L L GR +T +L +L E + ++ + DI E
Sbjct: 221 TQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 35.9 bits (79), Expect = 0.005
Identities = 17/84 (20%), Positives = 42/84 (50%)
Frame = +3
Query: 51 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 230
EK+ I+F + + +++ + + +G + V+D G + + EG +P++ +
Sbjct: 260 EKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRI 319
Query: 231 RLDLAGRDLTDYLMKILTERGYSF 302
+++ G D+T MK+L + +
Sbjct: 320 KINYGGDDITLLFMKLLMRSHFPY 343
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 196 STKVTLCPTPSSVWTW 243
STK CP PS W W
Sbjct: 52 STKTATCPDPSWEWAW 67
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 97 MAGELKVSNMIWVIFSLLALGLSLVPNSCS 8
M ++ N W++F LL+ L+ V SCS
Sbjct: 1 MVSDMLGGNKRWILFGLLSFLLNCVLVSCS 30
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 197 LRRLRSAPRHPPSGLGWSRLDRLPHED 277
L++ + +H G WS LDR H+D
Sbjct: 254 LKKSKRVKKHDYGGEDWSLLDRKFHDD 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,275,546
Number of Sequences: 5004
Number of extensions: 43211
Number of successful extensions: 177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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