Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30897
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 413 e-116
SB_56| Best HMM Match : Actin (HMM E-Value=0) 412 e-115
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 411 e-115
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 410 e-115
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 392 e-109
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 308 3e-84
SB_54| Best HMM Match : Actin (HMM E-Value=0) 273 7e-74
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 1e-65
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 206 1e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 151 4e-37
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 151 5e-37
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 110 8e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 1e-14
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 38 0.009
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 32 0.35
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.35
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.35
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 29 3.2
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.3
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 29 4.3
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58359| Best HMM Match : DUF554 (HMM E-Value=5) 28 7.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 7.5
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 9.9
SB_42996| Best HMM Match : Neur_chan_memb (HMM E-Value=0.14) 27 9.9
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 9.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 413 bits (1016), Expect = e-116
Identities = 195/205 (95%), Positives = 202/205 (98%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDI
Sbjct: 231 AASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGG+TMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGSTMYPGIADRMQ 315
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 412 bits (1015), Expect = e-115
Identities = 195/205 (95%), Positives = 202/205 (98%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY
Sbjct: 110 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY 169
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 170 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQT 229
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDI
Sbjct: 230 AASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGG+TMYPGIADRMQ
Sbjct: 290 RKDLYANTVLSGGSTMYPGIADRMQ 314
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 411 bits (1013), Expect = e-115
Identities = 194/205 (94%), Positives = 202/205 (98%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 171 ALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMET 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDI
Sbjct: 231 AASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGG+TMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGSTMYPGIADRMQ 315
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 410 bits (1010), Expect = e-115
Identities = 195/205 (95%), Positives = 202/205 (98%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY
Sbjct: 110 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY 169
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMAT
Sbjct: 170 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMAT 229
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDI
Sbjct: 230 AAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGG+TM+PGIADRMQ
Sbjct: 290 RKDLYANTVLSGGSTMFPGIADRMQ 314
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 392 bits (964), Expect = e-109
Identities = 185/200 (92%), Positives = 194/200 (97%)
Frame = +3
Query: 45 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 224
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 225 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 404
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 405 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 584
SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257
Query: 585 ANTVMSGGTTMYPGIADRMQ 644
ANTV+SGGTTMYPGIADRMQ
Sbjct: 258 ANTVLSGGTTMYPGIADRMQ 277
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 308 bits (756), Expect = 3e-84
Identities = 160/205 (78%), Positives = 167/205 (81%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G
Sbjct: 111 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GD 158
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
+ H + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 159 GVSHTV---------------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQT 203
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDI
Sbjct: 204 AASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDI 263
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTVMSGGTTMYPG+ADRMQ
Sbjct: 264 RKDLYANTVMSGGTTMYPGLADRMQ 288
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 273 bits (670), Expect = 7e-74
Identities = 122/192 (63%), Positives = 153/192 (79%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY
Sbjct: 2155 LNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+
Sbjct: 2215 WLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKE 2274
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S E Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+
Sbjct: 2275 AETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDL 2334
Query: 570 RKDLYANTVMSG 605
R +L+ N V+SG
Sbjct: 2335 RAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 246 bits (602), Expect = 1e-65
Identities = 108/205 (52%), Positives = 147/205 (71%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+
Sbjct: 114 LNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGF 173
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE
Sbjct: 174 ALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKL 233
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A +T L + Y LPDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D
Sbjct: 234 ALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDT 293
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
R + Y + V+SGG+TMYPG+ R++
Sbjct: 294 RSEFYKHIVLSGGSTMYPGLPSRLE 318
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 206 bits (503), Expect = 1e-53
Identities = 97/106 (91%), Positives = 102/106 (96%)
Frame = +3
Query: 66 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 245
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 246 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 383
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 151 bits (367), Expect = 4e-37
Identities = 65/106 (61%), Positives = 91/106 (85%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+
Sbjct: 136 LNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGF 195
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 347
A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 196 AMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 522 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 626
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 151 bits (366), Expect = 5e-37
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +3
Query: 393 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 572
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 573 KDLYANTVMSGGTTMYPGIADRMQ 644
KDLY+N V+SGG+TM+PGIADRMQ
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQ 88
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 110 bits (265), Expect = 8e-25
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +3
Query: 111 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 287
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 288 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERF 467
RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 468 RCPEALFQPSFL 503
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 212
N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY
Sbjct: 44 NTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYV 103
Query: 213 LPHAILRLDLAGRDLTDYLMKILTE 287
L AI+R LAG +T ++ E
Sbjct: 104 LQQAIVRSPLAGDFITAQCRQMFEE 128
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 504 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 641
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERL 191
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 8e-13
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +3
Query: 105 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 260
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 261 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 386
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 444 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 620
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 621 PGIADRMQ 644
R+Q
Sbjct: 256 RDFGRRLQ 263
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.5 bits (83), Expect = 0.009
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Frame = +3
Query: 51 EKMTQIMFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 212
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 392
+ A+ R + +L E +F ++ +KE CYV+ F ++M A
Sbjct: 379 IKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIA 417
Query: 393 ---AASTSLEKSYELPD 434
++ + Y LPD
Sbjct: 418 RQRGKENTIVREYVLPD 434
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 510 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 641
E + + +S++ C +D RK L N V+ GGT M PG R+
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRL 97
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 474 PEALFQPSFLGMESCGIHETV 536
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 27 RLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 158
R+ A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 415 RVKEAAKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 323 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 156
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 155 DTGGTTGGVQ 126
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 147 TGIVLDSGDGVSHTVPI 197
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 287 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 144
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 247 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAW 110
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -1
Query: 121 STAWMATYMAGELKVSNMIWV---IFSLLALGLS 29
S AW+ + + EL+ S +WV IFS+L +G+S
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGVS 196
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +3
Query: 48 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 158
+E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 543 KEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 230 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 132
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 45 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 194
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 518 RHPRDRVQLHHEVRRRHP*GPVRQH--RHVRWYHHVPRYRRQDAE 646
R P+DR + HH RRRH R+H H R H ++ DA+
Sbjct: 830 RPPQDRHRRHHH-RRRHHNNKHRKHSREHSRRRHQRKHHKGNDAQ 873
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 158
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_58359| Best HMM Match : DUF554 (HMM E-Value=5)
Length = 429
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 106 ATYMAGELKVSNMIWVIFSLLALGLSLVPNS 14
A Y+ +L ++N+ W ++LLA+ SL P+S
Sbjct: 129 AGYVPPKLAIANLYWKAWTLLAIVASLNPSS 159
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 339 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 479
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 646
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
>SB_42996| Best HMM Match : Neur_chan_memb (HMM E-Value=0.14)
Length = 190
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 61 VIFSLLALGLSLVPNSCSPG 2
VI +LLAL + ++ NSCSPG
Sbjct: 54 VITNLLALTVFMLSNSCSPG 73
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 173 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 331
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,214,893
Number of Sequences: 59808
Number of extensions: 375283
Number of successful extensions: 1427
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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