Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30897
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 415 e-116
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 415 e-116
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 414 e-116
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 414 e-116
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 414 e-116
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 414 e-116
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 413 e-116
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 413 e-116
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 413 e-116
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 413 e-116
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 388 e-108
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 249 1e-66
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 237 4e-63
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 151 5e-37
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 96 2e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 83 1e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 83 1e-16
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.53
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 415 bits (1021), Expect = e-116
Identities = 196/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 415 bits (1021), Expect = e-116
Identities = 196/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 414 bits (1020), Expect = e-116
Identities = 195/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 414 bits (1020), Expect = e-116
Identities = 195/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 67 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 126
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 127 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 186
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 187 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 246
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 247 RKDLYANTVLSGGTTMYPGIADRMQ 271
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 414 bits (1020), Expect = e-116
Identities = 195/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 97 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 156
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 157 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 216
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 217 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 276
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 277 RKDLYANTVLSGGTTMYPGIADRMQ 301
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 414 bits (1020), Expect = e-116
Identities = 195/205 (95%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 413 bits (1018), Expect = e-116
Identities = 194/205 (94%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 413 bits (1018), Expect = e-116
Identities = 194/205 (94%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 413 bits (1018), Expect = e-116
Identities = 194/205 (94%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 413 bits (1018), Expect = e-116
Identities = 194/205 (94%), Positives = 203/205 (99%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct: 111 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DI
Sbjct: 231 AASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDI 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGTTMYPGIADRMQ
Sbjct: 291 RKDLYANTVLSGGTTMYPGIADRMQ 315
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 388 bits (955), Expect = e-108
Identities = 181/205 (88%), Positives = 195/205 (95%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGY
Sbjct: 110 LNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGY 169
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A
Sbjct: 170 ALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAA 229
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDI
Sbjct: 230 AASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDI 289
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
RKDLYANTV+SGGT+M+PGIADRMQ
Sbjct: 290 RKDLYANTVLSGGTSMFPGIADRMQ 314
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 249 bits (609), Expect = 1e-66
Identities = 111/205 (54%), Positives = 148/205 (72%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+
Sbjct: 114 LNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGF 173
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE
Sbjct: 174 ALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERL 233
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D
Sbjct: 234 ALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDT 293
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
R D Y + V+SGGTTMYPG+ R++
Sbjct: 294 RLDFYKHIVLSGGTTMYPGLPSRLE 318
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 237 bits (581), Expect = 4e-63
Identities = 113/204 (55%), Positives = 145/204 (71%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGF 173
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+ALD T
Sbjct: 174 AMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PT 228
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S++ SY LPD I I N FR PE LF+P +G E G+ V SIMKCDVD+
Sbjct: 229 KVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDL 288
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
R+ LY+N V+SGGTT++ G DR+
Sbjct: 289 RQTLYSNIVLSGGTTLFKGFGDRL 312
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 151 bits (365), Expect = 5e-37
Identities = 85/222 (38%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 185
LN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H
Sbjct: 124 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTH 183
Query: 186 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 365
+P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV
Sbjct: 184 CIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCP 243
Query: 366 DFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGME-SC 518
D +E T K DG IT +G ERF PE F P F E +
Sbjct: 244 DVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTT 301
Query: 519 GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q
Sbjct: 302 PISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQ 343
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 113 bits (271), Expect = 1e-25
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Frame = +3
Query: 54 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 233
++ QI E + + Q L LYA TTG+V+D G+ V+ VP+ +GY + AI
Sbjct: 291 ELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVN-IVPVIDGYVVESAICS 349
Query: 234 LDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 404
+ + + D L L+ Y+F + E+ I+R E+ YV D+++E + T
Sbjct: 350 IPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKET 409
Query: 405 --SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 575
SL+ P Q I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+
Sbjct: 410 RISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRR 469
Query: 576 DLYANTVMSGGTTMYPGIADRMQ 644
LY N ++GG ++ PGIA++++
Sbjct: 470 TLYRNIYLAGGASLMPGIAEKLE 492
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.3 bits (229), Expect = 2e-20
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 35/238 (14%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 212
N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA
Sbjct: 134 NDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTT---AEREIVRD-------IKEKLCYVA 362
+ HA+++ + G +T+ L ++L ++ T +E V + ++ L V
Sbjct: 194 VTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTPRKNLPQVT 253
Query: 363 LDFE--------QEMATA---AASTSLEKSY---------ELPDGQVITIGNERFRCPEA 482
++ ++MA TS++ Y P+G G ER + PE
Sbjct: 254 KSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGYTKEFGAERIKLPEC 313
Query: 483 LFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 641
LF +L E + + S D+DIR L++N ++GG ++ G +R+
Sbjct: 314 LFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGFTERL 371
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 83.4 bits (197), Expect = 1e-16
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Frame = +3
Query: 60 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 227
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 228 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 398
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 399 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 521
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 ENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 522 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
+ E V SI +C +R L N ++ GG++ +PG +R++
Sbjct: 289 VAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLE 329
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 83.4 bits (197), Expect = 1e-16
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Frame = +3
Query: 60 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 227
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 228 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 398
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 399 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 521
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 GNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 522 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
+ E V SI +C +R L N ++ GG++ +PG +R++
Sbjct: 289 VAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLE 329
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 28/227 (12%)
Frame = +3
Query: 48 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 227
R +T+I+ E ++ V + + +V+D G VPI EG + +
Sbjct: 6 RNTITKIVVEKIRCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEF 65
Query: 228 LRL-DLAGRDLTDYLMKILTERGYSFTTTAEREIV-----RDIK-----EKLCYVALDFE 374
+ GR L + + + + G ER + +DI E L + +
Sbjct: 66 ESARSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLD 125
Query: 375 QEMATAAASTSLEKSYELPDGQVITIGNER--------FRCPEALFQPS---FLGME--- 512
+E A + E PD + T+ ER F P +F+ S F
Sbjct: 126 KERAENWTKWEASEEGEKPD--IETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNP 183
Query: 513 ---SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
+ + ++ + KC +D+RK L+ N +++GG + PG+ R++
Sbjct: 184 TSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLE 230
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 178 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 83
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 323 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 189
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 185 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 364
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 365 RLRAG 379
+ AG
Sbjct: 130 QTDAG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,855,158
Number of Sequences: 27780
Number of extensions: 255464
Number of successful extensions: 874
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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