Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30897
(646 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 388 e-108
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 387 e-108
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 387 e-108
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 380 e-106
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 380 e-106
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 380 e-106
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 378 e-105
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 377 e-105
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 376 e-105
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 359 1e-99
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 318 2e-87
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 314 3e-86
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 230 7e-61
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 133 1e-31
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 127 5e-30
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 126 1e-29
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 101 3e-22
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 83 2e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 82 4e-16
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 66 2e-11
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 32 0.28
At5g43500.2 68418.m05318 expressed protein 32 0.37
At5g43500.1 68418.m05319 expressed protein 32 0.37
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 2.6
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 2.6
At5g67080.1 68418.m08458 protein kinase family protein contains ... 29 3.5
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 3.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 3.5
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 29 3.5
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 6.1
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 8.1
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 388 bits (954), Expect = e-108
Identities = 182/204 (89%), Positives = 193/204 (94%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM T
Sbjct: 172 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 ANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+PGIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFPGIADRM 315
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 387 bits (953), Expect = e-108
Identities = 181/204 (88%), Positives = 194/204 (95%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ T
Sbjct: 172 ALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 AKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+PGIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFPGIADRM 315
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 387 bits (953), Expect = e-108
Identities = 181/204 (88%), Positives = 194/204 (95%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ T
Sbjct: 172 ALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 AKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+PGIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFPGIADRM 315
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 380 bits (935), Expect = e-106
Identities = 179/204 (87%), Positives = 192/204 (94%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG+
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGF 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
+LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T
Sbjct: 172 SLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDI
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFSGIADRM 315
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 380 bits (935), Expect = e-106
Identities = 179/204 (87%), Positives = 192/204 (94%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG+
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGF 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
+LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T
Sbjct: 172 SLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDI
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFSGIADRM 315
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 380 bits (935), Expect = e-106
Identities = 179/204 (87%), Positives = 192/204 (94%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG+
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGF 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
+LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T
Sbjct: 172 SLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDI
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GIADRM
Sbjct: 292 RKDLYGNIVLSGGTTMFSGIADRM 315
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 378 bits (931), Expect = e-105
Identities = 180/204 (88%), Positives = 191/204 (93%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ T
Sbjct: 172 ALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 AKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGG+TM+PGIADRM
Sbjct: 292 RKDLYGNIVLSGGSTMFPGIADRM 315
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 377 bits (927), Expect = e-105
Identities = 178/204 (87%), Positives = 191/204 (93%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T
Sbjct: 172 ALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 SKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GI DRM
Sbjct: 292 RKDLYGNIVLSGGTTMFGGIGDRM 315
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 376 bits (924), Expect = e-105
Identities = 177/204 (86%), Positives = 191/204 (93%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 112 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 171
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T
Sbjct: 172 ALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELET 231
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDI
Sbjct: 232 SKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDI 291
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GI DRM
Sbjct: 292 RKDLYGNIVLSGGTTMFGGIGDRM 315
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 359 bits (882), Expect = 1e-99
Identities = 164/204 (80%), Positives = 186/204 (91%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct: 113 LNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGY 172
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQEM
Sbjct: 173 ALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEK 232
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDI
Sbjct: 233 ATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDI 292
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+PGIADRM
Sbjct: 293 RKDLYGNIVLSGGTTMFPGIADRM 316
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 318 bits (782), Expect = 2e-87
Identities = 151/204 (74%), Positives = 175/204 (85%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG
Sbjct: 67 LNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGS 126
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQEM
Sbjct: 127 ALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQEMEK 183
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DI
Sbjct: 184 ATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDI 243
Query: 570 RKDLYANTVMSGGTTMYPGIADRM 641
RKDLY N V+SGGTTM+ GI +RM
Sbjct: 244 RKDLYGNIVLSGGTTMFRGIEERM 267
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 314 bits (771), Expect = 3e-86
Identities = 144/203 (70%), Positives = 171/203 (84%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 212
NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYA
Sbjct: 102 NPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYA 161
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 392
LPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQEM
Sbjct: 162 LPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKT 221
Query: 393 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 572
+++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R
Sbjct: 222 TKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTR 281
Query: 573 KDLYANTVMSGGTTMYPGIADRM 641
+D+Y N +M+GGTTM GI +RM
Sbjct: 282 RDMYGNILMTGGTTMLHGIKERM 304
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 230 bits (562), Expect = 7e-61
Identities = 101/205 (49%), Positives = 146/205 (71%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 389
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQL 230
Query: 390 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDI 569
+T L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D
Sbjct: 231 GLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDN 290
Query: 570 RKDLYANTVMSGGTTMYPGIADRMQ 644
R LY + V+SGG+TMYPG+ R++
Sbjct: 291 RMMLYQHIVLSGGSTMYPGLPSRLE 315
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 133 bits (321), Expect = 1e-31
Identities = 81/203 (39%), Positives = 105/203 (51%)
Frame = +3
Query: 36 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 215
PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG
Sbjct: 100 PKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQ 159
Query: 216 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 395
A R +L G +LT + L + S + V +KE+ A E E+A
Sbjct: 160 HIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKK 214
Query: 396 ASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRK 575
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I + +
Sbjct: 215 TQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHR 274
Query: 576 DLYANTVMSGGTTMYPGIADRMQ 644
L NTV+ GGTT G R Q
Sbjct: 275 QLLENTVLCGGTTSMTGFESRFQ 297
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 127 bits (307), Expect = 5e-30
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVP 194
L P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H VP
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVP 188
Query: 195 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD-- 368
+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE CY D
Sbjct: 189 VAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIV 248
Query: 369 --FEQEMATAAASTSLEKSYELPDGQVIT--IGNERFRCPEALFQPSFLGME-SCGIHET 533
F + A K + G T +G ERF PE F P + + +
Sbjct: 249 KEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAV 308
Query: 534 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
+ I +D R+ LY N V+SGG+TM+ R+Q
Sbjct: 309 IDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQ 345
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 126 bits (304), Expect = 1e-29
Identities = 85/247 (34%), Positives = 132/247 (53%), Gaps = 42/247 (17%)
Frame = +3
Query: 30 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 209
LN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY
Sbjct: 134 LNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGY 193
Query: 210 ALPHAILRLDLAGRDLTDYLMKILTERG------YSF-------------------TTTA 314
L A++ L G LTD L+K L +G YSF TT +
Sbjct: 194 VLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTES 253
Query: 315 -----EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 479
+R IV DIK+ +C V + + + T+ SYELPDGQ + IG +RF+ P+
Sbjct: 254 YKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVPD 310
Query: 480 ALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 623
+F PS + GME G+ V SI KCDVDIR++LY++ +++GGT+
Sbjct: 311 VMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQ 370
Query: 624 GIADRMQ 644
+ +R++
Sbjct: 371 QLKERLE 377
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 101 bits (243), Expect = 3e-22
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Frame = +3
Query: 9 LQEFGTRLNPKANREKMTQIMFETF---NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 179
L F + KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V
Sbjct: 202 LCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQV 261
Query: 180 SHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 356
+PI G + + + LT +L + + E SF + VR +KEKLCY
Sbjct: 262 ITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCY 318
Query: 357 VALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETV 536
VALD++ E+ S + S E+ T+ ERF+ E LFQP GM + +H+ V
Sbjct: 319 VALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAV 373
Query: 537 YNSIMKCD-VDIRKD--LYANTVMSGGTTMYPGIADRMQ 644
+ CD + D + V++GG+ PG+++R++
Sbjct: 374 SLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLE 412
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 83.0 bits (196), Expect = 2e-16
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Frame = +3
Query: 9 LQEFGTRLNPKANREKMTQIMFETF---NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 179
L F + KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V
Sbjct: 202 LCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQV 261
Query: 180 SHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 356
+PI G + + + LT +L + + E SF + VR +KEKLCY
Sbjct: 262 ITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCY 318
Query: 357 VALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETV 536
VALD++ E+ S + S E+ T+ ERF+ E LFQP G+ +H+ V
Sbjct: 319 VALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLV 370
Query: 537 Y 539
Y
Sbjct: 371 Y 371
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 81.8 bits (193), Expect = 4e-16
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Frame = +3
Query: 63 QIMFETFNSPAMYVAI-QAVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGYA 212
+++FE F ++Y+A Q+++ LY + R +V+D G +H VP+ +
Sbjct: 115 ELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFT 174
Query: 213 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 392
L HAI R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A
Sbjct: 175 LNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLA 232
Query: 393 AASTSLEKS-YELPDGQVITIG 455
+L KS Y LPDG T G
Sbjct: 233 RNGNTLIKSTYVLPDGVTHTKG 254
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/112 (28%), Positives = 60/112 (53%)
Frame = +3
Query: 309 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 488
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 489 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLE 359
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Frame = +3
Query: 33 NPKANREKMTQIMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPI 197
NP +R KM +++FET+ PA+ + A S L+ + GIVL G +H++P
Sbjct: 127 NPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPF 186
Query: 198 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 377
+G + R ++ G +TDYL ++L+ + ++ E D+K + CY+A D+
Sbjct: 187 VDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYAS 246
Query: 378 EM 383
E+
Sbjct: 247 EI 248
Score = 57.6 bits (133), Expect = 7e-09
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +3
Query: 315 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 485
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 486 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRMQ 644
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R++
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLE 658
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 32.3 bits (70), Expect = 0.28
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Frame = +3
Query: 15 EFGTRLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 194
E G L+ ++ + F + P + + LS+ A G+T +V SG G S V
Sbjct: 356 ESGVELDSVTGLVELKNVDFSYPSRPDVKILNNFCLSVPA-GKTIALVGSSGSGKSTVVS 414
Query: 195 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 374
+ E + P++ L L G+DL ++ L ++ + IKE + D +
Sbjct: 415 LIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQEPALFATSIKENILLGRPDAD 472
Query: 375 QEMATAAASTSLEKSY--ELPDGQVITIG 455
Q AA + S+ +LPDG +G
Sbjct: 473 QVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 48 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 227
+E +T ++ E + + A+ V + + +++ +G TT +++ G S V + +G +LP+
Sbjct: 253 KEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTE 311
Query: 228 LRLDLAGRDLTDYLMKI 278
L G D+ L+ I
Sbjct: 312 KILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 48 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 227
+E +T ++ E + + A+ V + + +++ +G TT +++ G S V + +G +LP+
Sbjct: 265 KEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTE 323
Query: 228 LRLDLAGRDLTDYLMKI 278
L G D+ L+ I
Sbjct: 324 KILPFGGEDICRCLLWI 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 317 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 189
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 318 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 413
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g67080.1 68418.m08458 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = +3
Query: 105 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-LTDYLMKIL 281
A+ V+ SG+T + + + +S + I G +P L GRD L+ +K
Sbjct: 195 ALGCVVVEMFSGKTAWSLKEGSNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDP 254
Query: 282 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 461
+R + + D+ + DF M T STS +E PD ++ G++
Sbjct: 255 KKRWTAEMLLNHPFVTVDVDHDVLVKEEDFVVNMKTEDVSTSPRCPFEFPDWVSVSSGSQ 314
Query: 462 RFRCPE 479
P+
Sbjct: 315 TIDSPD 320
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 185 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 301
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 185 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 301
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 129 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 308
+ SG+T +V SG G S V + E + P++ ++ L G ++ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVN 447
Query: 309 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY--ELPDGQVITIG 455
I E + Y D AAAS + S+ LP G +G
Sbjct: 448 QEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 637 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 482
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 559 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 425
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,738
Number of Sequences: 28952
Number of extensions: 253543
Number of successful extensions: 898
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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