Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30896
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 237 RTSMSHEMRYAPDCACHTKCAPGCCAGSPPQ 329
           R S + E+   P  +   +CA  C  G PP+
Sbjct: 89  RNSATAELLKNPSLSSPDECARACREGEPPR 119


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 237 RTSMSHEMRYAPDCACHTKCAPGCCAGSPPQ 329
           R S + E+   P  +   +CA  C  G PP+
Sbjct: 89  RNSATAELLKNPSLSSPDECARACREGEPPR 119


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 207 PGYENYGDQNRTSMSHEMRYAPDCACHTKCA-PGC 308
           P  ++  D+N  ++  +   APDC   T+C  P C
Sbjct: 139 PDCKDESDENSCTVETDPNRAPDCD-PTQCVLPDC 172


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +3

Query: 597 QNRTSMSHEMRYAPDCACHTKCVIAGDAXLLRPAVRH 707
           QNR  +S  +RY    +    C +      ++P  +H
Sbjct: 443 QNRAKLSELLRYHTSASGDEACSLKDYVSRIKPNQKH 479


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 95  NNWVKFD*TRMASSALIALKQE 30
           N WV FD  R   + +  LK+E
Sbjct: 828 NQWVGFDDERSLKTKMAWLKEE 849


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 18  EINGFLFKCNQCRRCHSSLIKLDPIIQQ 101
           +I G++  CN       SLI +D II++
Sbjct: 114 DIFGWIILCNIFEAAAKSLIYIDMIIKK 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,784
Number of Sequences: 336
Number of extensions: 4218
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)