Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30896
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0471 - 17563245-17563488,17563564-17563655,17563941-175640...    35   0.060
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938...    31   0.74 
05_07_0344 + 29411767-29411961,29412692-29412741,29413295-294134...    30   1.7  
03_04_0058 - 16915281-16915313,16915424-16915535,16915585-169169...    30   2.3  
09_06_0023 - 20299435-20299528,20299666-20299757,20299873-202999...    29   4.0  

>08_02_0471 -
           17563245-17563488,17563564-17563655,17563941-17564023,
           17564418-17564499,17565234-17565461,17565553-17565654,
           17565818-17565953,17566080-17566129,17566465-17566572,
           17568702-17568911
          Length = 444

 Score = 35.1 bits (77), Expect = 0.060
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -1

Query: 547 RSKLQKKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTIH 425
           +  L+K     R DA + F G K + E++++ +LYYDN ++
Sbjct: 112 KGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVN 152


>09_02_0435 -
           9384225-9384412,9385084-9385133,9385209-9385274,
           9385360-9385451,9385893-9385975,9386181-9386259,
           9386888-9387115,9387196-9387297,9387719-9387854,
           9387984-9388033,9389391-9389618
          Length = 433

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 538 LQKKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTI 428
           L+K     R DA + F G K + E++++ +LYYD+ +
Sbjct: 85  LEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNV 121


>05_07_0344 +
           29411767-29411961,29412692-29412741,29413295-29413430,
           29413931-29414032,29414153-29414380,29414460-29414544,
           29414648-29414730,29414854-29414945,29415048-29415141
          Length = 354

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 514 RSDARLEFTGYKKLNETIREIVLYYDNTI 428
           R +A + F G K + E++++ +LYYDN +
Sbjct: 82  RFEAVIHFAGLKAVGESVQKPLLYYDNNL 110


>03_04_0058 -
           16915281-16915313,16915424-16915535,16915585-16916990,
           16919112-16919282
          Length = 573

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +1

Query: 1   MRFFISKLMDSCLSAINADDAILV*SNLTQLFNNAL--TIFAIVRTFELSFQ--FMYIIF 168
           +RF+I +++ +    +  DD ++V  +LTQLF+  L   +   V T   SF     Y+ F
Sbjct: 349 LRFYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFHRYHKYLNF 408

Query: 169 G--VYSFRIDLH 198
              + S +ID H
Sbjct: 409 SHPIISSKIDPH 420


>09_06_0023 -
           20299435-20299528,20299666-20299757,20299873-20299955,
           20300066-20300147,20300235-20300462,20300646-20300747,
           20300834-20300969,20301105-20301514
          Length = 408

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 547 RSKLQKKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTI 428
           +  ++K     R DA + F G K + E++    +YY+N +
Sbjct: 126 KDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNV 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,225,118
Number of Sequences: 37544
Number of extensions: 385799
Number of successful extensions: 742
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)