Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30896
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    30   2.9  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    30   2.9  
AY071548-1|AAL49170.1|  374|Drosophila melanogaster RE58433p pro...    29   5.2  
AE014134-17|AAF51560.1|  374|Drosophila melanogaster CG11377-PA ...    29   5.2  

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +3

Query: 39  KCNQCRRCHSSLIKLD---PIIQQC--FNNFCYCSYF*IKLPIYVYNFWSLLL*NRFTYI 203
           + + CR CH  ++K+D   P I  C  F+NF Y   F     +Y +  + +++ + +   
Sbjct: 159 RAHHCRTCHMCVLKMDHHCPWIVNCVHFHNFKYFILFLFYAEVYCFYLFCVMVYDLYLIC 218

Query: 204 G 206
           G
Sbjct: 219 G 219


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +3

Query: 39  KCNQCRRCHSSLIKLD---PIIQQC--FNNFCYCSYF*IKLPIYVYNFWSLLL*NRFTYI 203
           + + CR CH  ++K+D   P I  C  F+NF Y   F     +Y +  + +++ + +   
Sbjct: 137 RAHHCRTCHMCVLKMDHHCPWIVNCVHFHNFKYFILFLFYAEVYCFYLFCVMVYDLYLIC 196

Query: 204 G 206
           G
Sbjct: 197 G 197


>AY071548-1|AAL49170.1|  374|Drosophila melanogaster RE58433p
           protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 198 YIGPGYENYGDQNRTSMSHEMRYAPDCA-CHTKCAPGCCAGSPPQS 332
           Y GP     G ++  S   E +    C  CH  C  G C G  P+S
Sbjct: 170 YAGPNCNECGPEHYESFRDEKKLL--CTQCHAACGEGGCTGGGPKS 213


>AE014134-17|AAF51560.1|  374|Drosophila melanogaster CG11377-PA
           protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 198 YIGPGYENYGDQNRTSMSHEMRYAPDCA-CHTKCAPGCCAGSPPQS 332
           Y GP     G ++  S   E +    C  CH  C  G C G  P+S
Sbjct: 170 YAGPNCNECGPEHYESFRDEKKLL--CTQCHAACGEGGCTGGGPKS 213


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,191,256
Number of Sequences: 53049
Number of extensions: 702275
Number of successful extensions: 2288
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)