Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30896
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026205-7|AAD47130.1|  118|Caenorhabditis elegans Hypothetical ...    31   0.88 
U00040-2|AAA50667.4|  366|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U39741-2|AAQ81278.1|  279|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U39741-1|AAA80429.2|  301|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF026205-7|AAD47130.1|  118|Caenorhabditis elegans Hypothetical
           protein T23E7.2d protein.
          Length = 118

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +3

Query: 120 YCSYF*IKLPIYVYNFWSLLL*NRFTYIGPGYENYGDQNRTSMSHEMRYAPD 275
           YC  +    P Y+YN ++L L  +  Y  P  E++   NR  +   + Y  D
Sbjct: 20  YCIPYFFYYPFYLYNVYTLSLITKSPYTPPNMEDHRLINRPEIRRSIAYTLD 71


>U00040-2|AAA50667.4|  366|Caenorhabditis elegans Hypothetical
           protein C18H2.2 protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 66  SSLIKLDPIIQQCFNNFCYCSYF*IKLPIYVY 161
           +SL+K+ P IQ CFN+  + S   +++ I V+
Sbjct: 88  TSLLKIPPNIQSCFNDIDFTSLLNLRVVILVH 119


>U39741-2|AAQ81278.1|  279|Caenorhabditis elegans Hypothetical
           protein F12D9.1b protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 352 SLIIVFSYIC*SFVLCLVNLLIICSV 429
           +L    +YIC S +LC+  L+++C V
Sbjct: 205 TLFSSITYICGSIILCIAVLMVVCVV 230


>U39741-1|AAA80429.2|  301|Caenorhabditis elegans Hypothetical
           protein F12D9.1a protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 352 SLIIVFSYIC*SFVLCLVNLLIICSV 429
           +L    +YIC S +LC+  L+++C V
Sbjct: 227 TLFSSITYICGSIILCIAVLMVVCVV 252


>Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical
           protein ZK1067.7 protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 270 PDCACHTKCAPGCCAGSPPQSLVLI 344
           P C C + CAP C   +  Q ++++
Sbjct: 162 PTCNCQSACAPACGGNNNNQQIIVV 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,444,610
Number of Sequences: 27780
Number of extensions: 383034
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)