Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30889
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 606 NRSVQKRFIHKIISFFRHFT*QPILRLNNFTIL 508
           N + + + +  +I+ F HFT      LN  TIL
Sbjct: 469 NEAEEVKILLDVINHFPHFTAARFFDLNRKTIL 501


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 612 YFLFYISFKCCRIYCI 659
           YF FY ++  C I CI
Sbjct: 153 YFQFYYTYFLCVIVCI 168


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 585 FIHKIISFFRHFT*QPILRLNNFTILTHYYTRVIILLNR 469
           F H  I  +  F   P++ LN+F    H +  ++ LL++
Sbjct: 436 FFHDTIPPYLFFESPPVVFLNDFISHQHAWIWLLWLLSQ 474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 585 FIHKIISFFRHFT*QPILRLNNFTILTHYYTRVIILLNR 469
           F H  I  +  F   P++ LN+F    H +  ++ LL++
Sbjct: 436 FFHDTIPPYLFFESPPVVFLNDFISHQHAWIWLLWLLSQ 474


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 585 FIHKIISFFRHFT*QPILRLNNFTILTHYYTRVIILLNR 469
           F H  I  +  F   P++ LN+F    H +  ++ LL++
Sbjct: 436 FFHDTIPPYLFFESPPVVFLNDFISHQHAWIWLLWLLSQ 474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 585 FIHKIISFFRHFT*QPILRLNNFTILTHYYTRVIILLNR 469
           F H  I  +  F   P++ LN+F    H +  ++ LL++
Sbjct: 436 FFHDTIPPYLFFESPPVVFLNDFISHQHAWIWLLWLLSQ 474


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 40  TNPKANNVNTLNGTESVGS 96
           TN   N  N  NG  SVGS
Sbjct: 135 TNNNTNFNNNSNGASSVGS 153


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 459 FTFDARIWDEISAWEHV 409
           F+ + ++W +I AW ++
Sbjct: 32  FSLEHQLWQKIQAWTYL 48


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 40  TNPKANNVNTLNGTESVGS 96
           TN   N  N  NG  SVGS
Sbjct: 83  TNNNTNFNNNSNGASSVGS 101


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 40  TNPKANNVNTLNGTESVGS 96
           TN   N  N  NG  SVGS
Sbjct: 266 TNNNTNFNNNSNGASSVGS 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,238
Number of Sequences: 336
Number of extensions: 4081
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)