Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30887
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -2

Query: 621 LRAPPEELSPPRALPAPVPQSRASVF*G--PSHRTFVAGKDLITKDM 487
           ++A PE++S  R  P P        F G    +R F A     T+D+
Sbjct: 513 IKADPEKISAIRNFPVPQKTKHVRAFLGLCNFYRKFCARYSAATQDL 559


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 469 EDITTRHIFSYKILSCDE 522
           E+  TRH+   +I+ CD+
Sbjct: 250 EEYVTRHLIDGRIIGCDQ 267


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = -1

Query: 427 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 248
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 247 VFLCL 233
           + + L
Sbjct: 123 LLVAL 127



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -1

Query: 409 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 290
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 109 PWRSPESAQLKPHTGNH 159
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,818
Number of Sequences: 336
Number of extensions: 3040
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)