Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30878
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 462 ITVVFVFYMNQLTCVP 415
           IT+++ F +N+ TC P
Sbjct: 655 ITIIYQFQVNKPTCGP 670


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 814 KPKLYSVGHDHDLQLTLED 758
           KPK+  VG D D     ED
Sbjct: 244 KPKIEDVGEDEDEDTKKED 262


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -2

Query: 194 KVSRIRRETYFHMITFKLIFTCILNQYVYTFIANLITSSRLHFLN 60
           K S++ +  YF  +  +++F C     +  F     TS    FLN
Sbjct: 129 KESKLMKNFYFWFVLKQVMFLCYSTYGIQVFGTMQRTSFFKTFLN 173


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 126 FKSICVHFHSEFNNIIAFAFLKLIYFL 46
           F  +C H    F N I F +  L+Y +
Sbjct: 144 FDFLCRHTVEYFQNYIHFFYQLLLYLI 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,216
Number of Sequences: 336
Number of extensions: 3989
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)