Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30878
(825 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.85
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 1.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 1.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 1.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 1.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 2.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 2.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 3.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.0
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 442 KYKYHSNQYQKKCPTLSHIVN 504
KY Y++N Y KK ++I+N
Sbjct: 103 KYNYNNNNYNKKLYYKNYIIN 123
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 442 KYKYHSNQYQKKCPTLSHIVN 504
KY Y++N Y C L + +N
Sbjct: 97 KYNYNNNNYNNNCKKLYYNIN 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 442 KYKYHSNQYQKKCPTLSHIVN 504
KY Y++N Y C L + +N
Sbjct: 97 KYNYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 442 KYKYHSNQYQKKCPTLSHIVN 504
KY Y++N Y C L + +N
Sbjct: 97 KYNYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 442 KYKYHSNQYQKKCPTLSHIVN 504
KY Y++N Y C L + +N
Sbjct: 97 KYNYNNNNYNNNCKKLYYNIN 117
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 445 YKYHSNQYQKKCPTLSHIVN 504
YKY+ N Y KK ++I+N
Sbjct: 329 YKYNYNNYNKKLYYKNYIIN 348
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -3
Query: 361 QNSIVCCLS--RHSYTSSSIYKMKTNEME 281
Q + VC S R ++TS Y+M T EM+
Sbjct: 388 QETHVCFFSLLRDAFTSKGEYRMSTGEMK 416
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 3.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 406 IIGWYTSQLIHIKYKYHSNQYQKKCPTLSHIVNSLR 513
IIG +I + YK H + QKK H + R
Sbjct: 834 IIGGIGLIIIEVAYKKHQIRKQKKMELARHAADKWR 869
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 406 IIGWYTSQLIH---IKYKYHSNQYQKK 477
II ++ IH KY Y++N Y KK
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 406 IIGWYTSQLIH---IKYKYHSNQYQKK 477
II ++ IH KY Y++N Y KK
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 406 IIGWYTSQLIH---IKYKYHSNQYQKK 477
II ++ IH KY Y++N Y KK
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 406 IIGWYTSQLIH---IKYKYHSNQYQKK 477
II ++ IH KY Y++N Y KK
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKK 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,166
Number of Sequences: 438
Number of extensions: 4115
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -