Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30874
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    26   0.37 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 42  MLQIPTSLTTFWRSSFTIASSLPITTVRLKRA 137
           +L IPT   T  +SSF+I+S LP T +   ++
Sbjct: 8   ILVIPTMARTPLKSSFSISSILPETALEAPKS 39


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 563 VDSFRAQWYLQPAKYDKDNLFYIYNREYSKAL 658
           +D+ R  W    AKYDKD    +Y ++Y   +
Sbjct: 94  IDNKRDWWNELEAKYDKDG---VYRQKYKDVI 122


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +2

Query: 275 FPVEFRLIFAENAIKLMYKRDGLALTLSNDVH 370
           FP+++ L+F+E  + L++K   + + +S  V+
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVSGLVY 731


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 261 MSLEPWSQS**AYSMQFILLFRISLFTTFVMTSLFF 154
           +S+EP   S   YS+ +ILLF + +  + V  + F+
Sbjct: 21  VSVEPTGFSPKGYSLLWILLFTLGVTISGVYRTDFY 56


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  WHLCMLQIPTSLTTFWRSS 86
           +H+ M  +PT L +F++S+
Sbjct: 59  YHIFMHIVPTKLISFYKST 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,305
Number of Sequences: 336
Number of extensions: 3027
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)