Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30873
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 386 e-108
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 385 e-107
SB_56| Best HMM Match : Actin (HMM E-Value=0) 385 e-107
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 385 e-107
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 383 e-107
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 364 e-101
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 257 8e-69
SB_54| Best HMM Match : Actin (HMM E-Value=0) 154 8e-38
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 90 1e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 3e-17
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 70 2e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 9e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.54
SB_45057| Best HMM Match : Rhabdo_NV (HMM E-Value=4.1) 30 2.2
SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_31160| Best HMM Match : FeThRed_B (HMM E-Value=4.1) 29 3.8
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 29 5.0
SB_20152| Best HMM Match : CRAL_TRIO_N (HMM E-Value=2.6) 29 5.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 5.0
SB_18258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 5.0
SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_33650| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_14412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_366| Best HMM Match : ResIII (HMM E-Value=0.28) 28 6.7
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 6.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 6.7
SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26) 28 8.8
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_6134| Best HMM Match : DUF1099 (HMM E-Value=5.5) 28 8.8
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 8.8
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_45218| Best HMM Match : tRNA_m1G_MT (HMM E-Value=9.8) 28 8.8
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 8.8
SB_6355| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 386 bits (951), Expect = e-108
Identities = 181/193 (93%), Positives = 188/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYEL
Sbjct: 146 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYEL 205
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 206 PDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 265
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 266 TTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 325
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 326 DESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 385 bits (948), Expect = e-107
Identities = 180/193 (93%), Positives = 188/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 244 PDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 STMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 385 bits (948), Expect = e-107
Identities = 180/193 (93%), Positives = 188/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYEL 242
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 243 PDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 303 STMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 385 bits (948), Expect = e-107
Identities = 180/193 (93%), Positives = 188/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 244 PDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 STMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 383 bits (942), Expect = e-107
Identities = 180/193 (93%), Positives = 188/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAAAS+SLEKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYEL 242
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANTV+SGG
Sbjct: 243 PDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 303 STMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 364 bits (895), Expect = e-101
Identities = 171/192 (89%), Positives = 180/192 (93%)
Frame = +3
Query: 6 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 185
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELP
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 186 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 365
DGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGT
Sbjct: 218 DGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGT 277
Query: 366 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 545
TMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYD
Sbjct: 278 TMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 337
Query: 546 ESGPGIVHRKCF 581
ESGP IVHRKCF
Sbjct: 338 ESGPAIVHRKCF 349
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 257 bits (629), Expect = 8e-69
Identities = 116/145 (80%), Positives = 132/145 (91%)
Frame = +3
Query: 147 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 326
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 327 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 506
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 507 TFQQMWISKEEYDESGPGIVHRKCF 581
TFQQMWI+KEEY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 154 bits (373), Expect = 8e-38
Identities = 68/119 (57%), Positives = 90/119 (75%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A S E Y L
Sbjct: 2228 RDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYML 2287
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 359
PDGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2288 PDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 153 bits (371), Expect = 1e-37
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 29/213 (13%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A +T L + Y L
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTL 246
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y + V+SGG
Sbjct: 247 PDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGG 306
Query: 363 TTMYPGIADRMQKEITAL---------------------APSTI-----KIKI-IAPP-E 458
+TMYPG+ R+++EI L P T K KI I P
Sbjct: 307 STMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPR 366
Query: 459 RKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 554
RK+ V++GG++LA + W++++EY+E G
Sbjct: 367 RKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 137
RDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 62 RDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = +3
Query: 198 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 374
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 375 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 506
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 507 TFQQMWISKEEYDESGPGIVHRKCF 581
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 140
RD+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 96 RDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 LTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 185
LT+ L + L + RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LP
Sbjct: 815 LTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLP 874
Query: 186 DGQVITIGNERFRCPEALFQPSFL 257
DGQ+I+IG E E LF+P L
Sbjct: 875 DGQMISIGYECISSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 258 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 437
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 438 KII---APPERKYSVWIGGSILASL 503
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = +3
Query: 264 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 428
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 429 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 548
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 276 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 380
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 101
RD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 209 RDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 228 PEALFQPSFLGMESCGIHETV 290
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 272 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 451
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 452 PREEVLRMDRWIHPG 496
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 421
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 422 LDHQ 433
H+
Sbjct: 954 RKHE 957
>SB_45057| Best HMM Match : Rhabdo_NV (HMM E-Value=4.1)
Length = 522
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLSTFQQMW-------ISKEEYDESGPGIVHRK-CF*AARPRDPG 608
PE YS+++GG+ L S +W + +E D G G++ K D G
Sbjct: 76 PETYYSLFVGGAHLRFPSVDATLWGRDISASVYQEMRDPGGTGVIALKPVVRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E SG G++ K D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDATLRGQDISAGVYQEIRDLSGAGVIALKPVMRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_31160| Best HMM Match : FeThRed_B (HMM E-Value=4.1)
Length = 828
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E SG G++ K D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDATLRGQDISAGVYQEIRDLSGAGVIALKPVMRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPG-IVHRKCF*AARPRDPG 608
PER YS+++GG+ L S T + IS Y E G G IV + D G
Sbjct: 20 PERYYSLFVGGAHLRFPSVDATLRGQDISAGVYQEIRDLGGAGVIVPKPVMRGPDINDDG 79
Query: 609 AVWWL 623
+VWW+
Sbjct: 80 SVWWV 84
>SB_20152| Best HMM Match : CRAL_TRIO_N (HMM E-Value=2.6)
Length = 490
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Frame = +3
Query: 381 IADRMQKEITALAPSTIKIKIIAP-------PERKYSVWIGGSILASLS---TFQQMWIS 530
+A +Q + P +K K++ P PE+ YS+++GG+ L S T + IS
Sbjct: 81 LAGLVQNILDEDIPDDVKHKLLKPLGPGSLDPEKYYSLFVGGAHLRFPSVDATLRGRDIS 140
Query: 531 KEEYDE----SGPGIVHRK-CF*AARPRDPGAVWWL 623
Y E G G++ K D G+VWW+
Sbjct: 141 AGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVWWV 176
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 490 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 353
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_18258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 453 PERKYSVWIGGS---ILASLSTFQQMWISKEEYDESGPGIVHRK-CF*AARPRDPGAVWW 620
PE+ YS+++GG+ + +T + IS Y E G++ K D G+VWW
Sbjct: 169 PEKYYSLFVGGAHRRFPSVDATLRGQDISASVYQEVFTGVIALKPVVRGPDINDDGSVWW 228
Query: 621 LCSSE 635
+ E
Sbjct: 229 VSVGE 233
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +2
Query: 275 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 448
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 449 SPREEVLRMDRWIHP 493
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 453 PERKYSVWIGGSILASL-STFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPGAV 614
PE+ YS+++GG+ L + +T + IS Y E G G++ K D G V
Sbjct: 59 PEKYYSLFVGGAHLRFVDATLRGQDISAGVYQEIRYLGGAGVIALKPVMRGPDINDDGPV 118
Query: 615 WWL 623
WW+
Sbjct: 119 WWV 121
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 342 NTVMSGGTTMYPGIADRMQKEITALAP 422
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_33650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVH-RKCF*AARPRDPG 608
PE+ YS+++GG+ L S T + +IS Y E G G++ + D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDDTLRGRYISAGVYQEIRDLGGAGVIALQPVMRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +2
Query: 272 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 439
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 440 DHRSPREEVLRMDRWIH 490
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_14412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E G G++ K D G
Sbjct: 70 PEKYYSLFVGGAYLRFPSVDATLRGQDISAGVYQEMRDLGGAGVIALKPVMRGPDINDDG 129
Query: 609 AVWWL 623
+VWW+
Sbjct: 130 SVWWV 134
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +2
Query: 227 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 406
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 407 HRPRALDHQ 433
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_366| Best HMM Match : ResIII (HMM E-Value=0.28)
Length = 1104
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + +S Y E G GI+ K D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDATLRGQDVSASVYQEIRDLGGAGIIALKPVMRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 6.7
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 269 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 442
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 443 -HRSPREEVLRMDRWIHPGFPVHLPADVD 526
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 278 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 448
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 69 EREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 188
E ++ +KE CYV+ F ++M A ++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26)
Length = 803
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E G G++ K D G
Sbjct: 382 PEKYYSLFVGGAHLRFQSIDATLRGQDISAGVYQEIRDLGGAGVIAPKPVMRGPDINDDG 441
Query: 609 AVWWL 623
+VWW+
Sbjct: 442 SVWWV 446
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 458
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_6134| Best HMM Match : DUF1099 (HMM E-Value=5.5)
Length = 743
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 453 PERKYSVWIGGSILASL-STFQQMWISKEEYDESGPGIVHRKCF*AARPRDPGAVWWL 623
PE+ YS+++GG+ L + +T + IS Y E +V + D G VWW+
Sbjct: 59 PEKYYSLFVGGAHLRFVDATLRGQDISAGVYQEI-RYLVEQPVMRGPDINDDGPVWWV 115
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 272 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 451
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 452 PREEVLRMDRWIH 490
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 93 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 233
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +2
Query: 299 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 472
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 473 MDRWIHP 493
+R +HP
Sbjct: 214 EERGVHP 220
>SB_45218| Best HMM Match : tRNA_m1G_MT (HMM E-Value=9.8)
Length = 361
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E G G++ K D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDATLRGQDISASVYQEIRDLGGTGVIALKPVVRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +2
Query: 269 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 448
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 449 SPREE 463
R+E
Sbjct: 606 DQRDE 610
>SB_6355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 453 PERKYSVWIGGSILASLS---TFQQMWISKEEYDE----SGPGIVHRK-CF*AARPRDPG 608
PE+ YS+++GG+ L S T + IS Y E G G++ K D G
Sbjct: 76 PEKYYSLFVGGAHLRFPSVDATLRGQDISASVYQEIRDLGGTGVIALKPVVRGPDINDDG 135
Query: 609 AVWWL 623
+VWW+
Sbjct: 136 SVWWV 140
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,289,257
Number of Sequences: 59808
Number of extensions: 445884
Number of successful extensions: 1331
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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