Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30873
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 391 e-109
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 391 e-109
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 391 e-109
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 391 e-109
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 391 e-109
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 391 e-109
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 390 e-109
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 390 e-109
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 390 e-109
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 384 e-107
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 367 e-102
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 189 2e-48
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 188 3e-48
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 111 5e-25
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 80 2e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 140 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 199
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 259
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 320 DESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 170 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 229
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 289
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 350 DESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 391 bits (963), Expect = e-109
Identities = 183/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 390 bits (961), Expect = e-109
Identities = 182/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 390 bits (961), Expect = e-109
Identities = 182/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 390 bits (961), Expect = e-109
Identities = 182/193 (94%), Positives = 190/193 (98%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 384 bits (946), Expect = e-107
Identities = 181/193 (93%), Positives = 189/193 (97%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 367 bits (903), Expect = e-102
Identities = 170/193 (88%), Positives = 182/193 (94%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYEL
Sbjct: 183 RDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYEL 242
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGG
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGG 302
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
T+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 189 bits (460), Expect = 2e-48
Identities = 91/193 (47%), Positives = 125/193 (64%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RD+T+YL +L GY F + E EIVR++KE CY+ALD T + S++ SY L
Sbjct: 187 RDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYAL 241
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PD I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGG
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGG 301
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY
Sbjct: 302 TTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEY 361
Query: 543 DESGPGIVHRKCF 581
++ G +H++ F
Sbjct: 362 EDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 188 bits (459), Expect = 3e-48
Identities = 92/197 (46%), Positives = 127/197 (64%), Gaps = 13/197 (6%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T L + Y L
Sbjct: 187 RDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTL 246
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V+SGG
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGG 306
Query: 363 TTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSILASL-- 503
TTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 307 TTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMK 366
Query: 504 STFQQMWISKEEYDESG 554
Q W+SK+EY+E G
Sbjct: 367 DRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = +3
Query: 174 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 338
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 339 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 509
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 510 FQQMWISKEEYDESGPGIVHRKC 578
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 113 bits (272), Expect = 1e-25
Identities = 55/167 (32%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Frame = +3
Query: 48 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNER 218
Y+F + E+ I+R E+ YV D+++E + T SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 219 FRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 398
F C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 399 KEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 539
+E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 493 QELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 111 bits (267), Expect = 5e-25
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RD+T ++ +L +R ++ E+ + IKEK CYV D +E T K
Sbjct: 205 RDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRT 262
Query: 183 PDG-QVIT-------IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDL 335
DG IT +G ERF PE F P F E + I +T+ I +C +D+R+ L
Sbjct: 263 YDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGL 322
Query: 336 YANTVMSGGTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPERKY 467
Y N V+SGG+TM+ A ++Q+++ L+ P I +++I+ ++Y
Sbjct: 323 YENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRY 382
Query: 468 SVWIGGSILASLSTFQQMWISKEEYDESGPGI 563
+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 383 AVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Frame = +3
Query: 69 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 197
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 198 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 533
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 534 EEYDESGPGI 563
+++DE G +
Sbjct: 374 KDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Frame = +3
Query: 69 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 197
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 198 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 533
++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373
Query: 534 EEYDESGPGI 563
+++DE G +
Sbjct: 374 KDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +3
Query: 288 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 452
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 453 PERK----YSVWIGGSILASL-STFQQMWISKEEY 542
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 275 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 418
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 374 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 472
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,421,323
Number of Sequences: 27780
Number of extensions: 300924
Number of successful extensions: 927
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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