Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30873
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 358 2e-99
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 358 2e-99
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 358 2e-99
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 355 2e-98
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 355 2e-98
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 352 2e-97
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 347 3e-96
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 346 8e-96
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 325 2e-89
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 311 4e-85
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 298 2e-81
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 285 2e-77
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 167 5e-42
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 148 3e-36
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 127 6e-30
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 102 2e-22
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 97 1e-20
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 85 3e-17
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 76 2e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 53 2e-07
At5g43500.2 68418.m05318 expressed protein 46 3e-05
At5g43500.1 68418.m05319 expressed protein 46 3e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.083
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.4
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 3.1
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 7.2
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.5
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 9.5
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 358 bits (881), Expect = 2e-99
Identities = 164/193 (84%), Positives = 179/193 (92%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA S+S+EKSYEL
Sbjct: 185 RDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 358 bits (880), Expect = 2e-99
Identities = 163/193 (84%), Positives = 180/193 (93%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YEL
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 358 bits (880), Expect = 2e-99
Identities = 163/193 (84%), Positives = 180/193 (93%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+EK+YEL
Sbjct: 185 RDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 355 bits (872), Expect = 2e-98
Identities = 163/193 (84%), Positives = 179/193 (92%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YEL
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EY
Sbjct: 305 TTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEY 364
Query: 543 DESGPGIVHRKCF 581
DE+GPGIVHRKCF
Sbjct: 365 DEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 355 bits (872), Expect = 2e-98
Identities = 163/193 (84%), Positives = 179/193 (92%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YEL
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EY
Sbjct: 305 TTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEY 364
Query: 543 DESGPGIVHRKCF 581
DE+GPGIVHRKCF
Sbjct: 365 DEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 352 bits (865), Expect = 2e-97
Identities = 163/193 (84%), Positives = 178/193 (92%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA +S+S+EK+YEL
Sbjct: 185 RDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EY
Sbjct: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 347 bits (854), Expect = 3e-96
Identities = 160/193 (82%), Positives = 177/193 (91%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ S+S+EKS+EL
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 346 bits (851), Expect = 8e-96
Identities = 159/193 (82%), Positives = 177/193 (91%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ S+S+EKS+EL
Sbjct: 185 RDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 543 DESGPGIVHRKCF 581
DESGP IVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 325 bits (799), Expect = 2e-89
Identities = 145/193 (75%), Positives = 170/193 (88%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQEM A S++++++YEL
Sbjct: 186 RDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYEL 245
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 246 PDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 305
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K EY
Sbjct: 306 TTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEY 365
Query: 543 DESGPGIVHRKCF 581
DE G IVHRKCF
Sbjct: 366 DEQGGAIVHRKCF 378
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 311 bits (763), Expect = 4e-85
Identities = 145/177 (81%), Positives = 162/177 (91%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+EK+YEL
Sbjct: 185 RDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYEL 244
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N V+SGG
Sbjct: 245 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 533
TTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 305 TTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 298 bits (732), Expect = 2e-81
Identities = 137/193 (70%), Positives = 164/193 (84%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
R LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQEM A S++++++YEL
Sbjct: 140 RHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYEL 196
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N V+SGG
Sbjct: 197 PDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGG 256
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY
Sbjct: 257 TTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEY 316
Query: 543 DESGPGIVHRKCF 581
+E+GP IVH KCF
Sbjct: 317 EENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 285 bits (699), Expect = 2e-77
Identities = 128/192 (66%), Positives = 156/192 (81%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
RDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQEM +++K+Y L
Sbjct: 174 RDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVL 233
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDGQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N +M+GG
Sbjct: 234 PDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGG 293
Query: 363 TTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 542
TTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY
Sbjct: 294 TTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEY 353
Query: 543 DESGPGIVHRKC 578
+E G IVHRKC
Sbjct: 354 EEHGAAIVHRKC 365
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 167 bits (407), Expect = 5e-42
Identities = 82/196 (41%), Positives = 127/196 (64%), Gaps = 12/196 (6%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYEL 182
R +T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E +T L K+Y L
Sbjct: 184 RHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTL 243
Query: 183 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 362
PDG+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R LY + V+SGG
Sbjct: 244 PDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGG 303
Query: 363 TTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS-LS 506
+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++LA +
Sbjct: 304 STMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMK 363
Query: 507 TFQQMWISKEEYDESG 554
+ WI++E+Y E G
Sbjct: 364 DAPEFWINREDYMEEG 379
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 148 bits (359), Expect = 3e-36
Identities = 78/191 (40%), Positives = 118/191 (61%), Gaps = 15/191 (7%)
Frame = +3
Query: 51 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCP 230
S+ +R IV DIK+ +C V + + + T+ SYELPDGQ + IG +RF+ P
Sbjct: 253 SYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVP 309
Query: 231 EALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 374
+ +F PS + GME G+ V SI KCDVDIR++LY++ +++GGT+
Sbjct: 310 DVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSM 369
Query: 375 PGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKEEYD 545
+ +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY+
Sbjct: 370 QQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYE 429
Query: 546 ESGPGIVHRKC 578
E G + RKC
Sbjct: 430 EHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 127 bits (307), Expect = 6e-30
Identities = 72/173 (41%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Frame = +3
Query: 81 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 260
V +KE+ A E E+A + + LPDGQVI+IG ER+ EALFQPS LG
Sbjct: 195 VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILG 251
Query: 261 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 440
+E GI E + I + + L NTV+ GGTT G R QKE L S I+
Sbjct: 252 LEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPT 310
Query: 441 IIAPPE------RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 581
++ PPE YS W+GG+ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 311 LVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 102 bits (245), Expect = 2e-22
Identities = 54/173 (31%), Positives = 91/173 (52%)
Frame = +3
Query: 63 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 242
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 243 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP 422
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L P
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVP 367
Query: 423 STIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 581
+KI + VW GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 368 DHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 12 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPD 188
T+YL ++++ R S E +V D KEKLC+V+LD +++ A +L KS Y LPD
Sbjct: 190 TNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPD 247
Query: 189 GQVITIG 209
G T G
Sbjct: 248 GVTHTKG 254
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 96.7 bits (230), Expect = 1e-20
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Frame = +3
Query: 9 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 188
LT +L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 288 LTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSG 339
Query: 189 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSG 359
T+ ERF+ E LFQP GM + +H+ V + CD + D + V++G
Sbjct: 340 EGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTG 399
Query: 360 GTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-IS 530
G+ PG+++R+++E+ PS+I I++I PP + W G ++++LS F W I+
Sbjct: 400 GSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCIT 459
Query: 531 KEEY 542
++++
Sbjct: 460 RKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 85.4 bits (202), Expect = 3e-17
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Frame = +3
Query: 3 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM----ATAAASTSLEK 170
+D+T ++ +++ ERG + ++ R +KE CY D +E A K
Sbjct: 207 KDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWK 266
Query: 171 SYELPDGQVIT--IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYA 341
+ G T +G ERF PE F P + + + + I +D R+ LY
Sbjct: 267 GVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYK 326
Query: 342 NTVMSGGTTMYPGIADRMQKEITALAPS----------------TIKIKIIAPPERKYSV 473
N V+SGG+TM+ R+Q+++ + + +++ +++ P ++++V
Sbjct: 327 NIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAV 386
Query: 474 WIGGSILASLSTFQQMWISKEEYDESGPGI 563
W GGS+L+S F +KEEY+E G I
Sbjct: 387 WFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Frame = +3
Query: 69 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 239
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 240 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 410
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R++ I
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIR 662
Query: 411 ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 554
+ P I ++ + W G S A+ F +K +YDE G
Sbjct: 663 MIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 9 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 137
+TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 206 VTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/95 (36%), Positives = 50/95 (52%)
Frame = +3
Query: 9 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 188
LT +L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 288 LTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSG 339
Query: 189 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 293
T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 340 EGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 264 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 440
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 441 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 554
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 264 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 440
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 441 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 554
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 276 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 455
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 456 ERKYS 470
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +3
Query: 276 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 455
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 456 ERKYS 470
ERK++
Sbjct: 394 ERKHA 398
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 72 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 167
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 391 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 236
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 272 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 445
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 272 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 445
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 313 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 179
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 392 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 505
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010,391
Number of Sequences: 28952
Number of extensions: 293750
Number of successful extensions: 978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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