Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30872
         (331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily ass...    28   1.4  
U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily ass...    28   1.4  
Z70683-1|CAA94590.1|  511|Caenorhabditis elegans Hypothetical pr...    28   1.8  
Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z81055-7|CAB02897.2|  445|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z68298-7|CAA92604.1|  447|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    26   5.5  
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p...    26   5.5  
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p...    26   5.5  
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    26   5.5  
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr...    26   5.5  
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr...    26   5.5  
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase...    26   5.5  
U41749-8|AAB52489.2|  592|Caenorhabditis elegans Toca (transduce...    26   7.3  
U41749-7|AAM54198.1|  529|Caenorhabditis elegans Toca (transduce...    26   7.3  
Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical p...    25   9.7  
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p...    25   9.7  

>U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform b protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 321 IGRIGYRAPPRVFFFFFY 268
           IG  G+ APP VF FFF+
Sbjct: 348 IGAFGHEAPPLVFKFFFW 365


>U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform a protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 321 IGRIGYRAPPRVFFFFFY 268
           IG  G+ APP VF FFF+
Sbjct: 346 IGAFGHEAPPLVFKFFFW 363


>Z70683-1|CAA94590.1|  511|Caenorhabditis elegans Hypothetical
           protein F13B12.1 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +1

Query: 169 SSGLALPLALLKSMGEGN--HSPSGEPYARLPTRAIKKKKKNSRGGPVPNSPYSES 330
           SSG + PLA +    EGN   SPSG+        + +     +R    P SP + S
Sbjct: 18  SSGASSPLAPISPRSEGNAPESPSGDVQDIYKDESFEAPASPARDSSAPASPSAAS 73


>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 201 QQCQGQSQAAAYRIAGQLIQVIVVYRTLIFI 109
           QQCQ +    A R+  +L+ V++VY  + F+
Sbjct: 236 QQCQVKENLRALRLGTRLVAVVLVYIMVCFL 266


>Z81055-7|CAB02897.2|  445|Caenorhabditis elegans Hypothetical
           protein F01G10.9 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 196 MPGAEPSRCLPNSRPINPSYSSVSH 122
           MP A P   LP S+PI P    V H
Sbjct: 346 MPLAPPGMALPPSQPIQPVQQQVGH 370


>Z68298-7|CAA92604.1|  447|Caenorhabditis elegans Hypothetical
           protein F44D12.8 protein.
          Length = 447

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 229 PSGEPYARLPTRAIKKKKKNSRGGPVPN 312
           P+GEP   +P RA    +KN  G P+ N
Sbjct: 240 PNGEPVWVVPERAPGDCEKNDEGVPITN 267


>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
           PLC210 protein.
          Length = 1898

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 214 EGNHSPSGEPYARL-PTRAIKKKKKNSRGGPVPNSP 318
           EG+ S S +P++ L    +IK +  +  G P PNSP
Sbjct: 609 EGSRSQSPQPHSPLVRPPSIKSQISSQSGPPGPNSP 644


>U41749-8|AAB52489.2|  592|Caenorhabditis elegans Toca (transducer
           of cdc42-dependentactin assembly) homolog protein 1,
           isoform a protein.
          Length = 592

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 70  KKKQTYLVCYTHLNENQSAIHY 135
           + KQTY V  T  NE QSA HY
Sbjct: 188 ESKQTYAVMTTKANEEQSA-HY 208


>U41749-7|AAM54198.1|  529|Caenorhabditis elegans Toca (transducer
           of cdc42-dependentactin assembly) homolog protein 1,
           isoform b protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 70  KKKQTYLVCYTHLNENQSAIHY 135
           + KQTY V  T  NE QSA HY
Sbjct: 188 ESKQTYAVMTTKANEEQSA-HY 208


>Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical
           protein F18E2.3 protein.
          Length = 1096

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 208 MGEGNHSPSGEPYARLPTRAIKKKKKNS 291
           M  GN+S   EP  R PT + + +KK +
Sbjct: 26  MAAGNNSVEKEPVFRSPTASTRGRKKRA 53


>Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical
           protein W02B12.4 protein.
          Length = 614

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 181 PSRCLPNSRPINPSYSSVSHFDFHLSAYSTLGTF 80
           P +C+P +RP+N S  S      ++   S L TF
Sbjct: 88  PPKCIPAARPVNISEFSEDCLYMNILKPSGLNTF 121


>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
            protein R05D3.11 protein.
          Length = 1327

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 202  KSMGEGNHSPSGEPYARLPTRAIKKKKKNSRGGPV 306
            K +   + S SGE   RL  +  K+ KK+ +GG V
Sbjct: 1172 KMVKRQDSSESGEETKRLTRQKRKQSKKSGKGGSV 1206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,336,348
Number of Sequences: 27780
Number of extensions: 141021
Number of successful extensions: 425
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)