Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30871
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   3.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.5  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 408 GISERRANALQNELEE-SRTLLEQA 479
           GI ERR+N +   +EE SR  +E A
Sbjct: 95  GILERRSNDIAGSIEEFSRERVEDA 119


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 408 GISERRANALQNELEE-SRTLLEQA 479
           GI ERR+N +   +EE SR  +E A
Sbjct: 328 GILERRSNDIAGSIEEFSRERVEDA 352


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 408 GISERRANALQNELEE-SRTLLEQA 479
           GI ERR+N +   +EE SR  +E A
Sbjct: 328 GILERRSNDIAGSIEEFSRERVEDA 352


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +2

Query: 110 RQTHPREGGRIRKHTQEPPA 169
           R THP E GR  K     PA
Sbjct: 351 RTTHPNEPGRFAKLLLRLPA 370


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 240 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 353
           KK E    E+E   DH  K N  ++K  + Y   + D+
Sbjct: 213 KKKEVK-EEIEDEPDHKWKKNDSSKKKTRYYYRSVDDV 249


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 452 RVPHTLGAGRPRPSPGRA 505
           +VP   G GR  P P R+
Sbjct: 320 QVPQLAGGGRRGPGPARS 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,255
Number of Sequences: 336
Number of extensions: 1734
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)