Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30871
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.11
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.11
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 31 0.19
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.19
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.25
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.3
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 1.8
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 2.3
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 2.3
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 27 2.3
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 27 2.3
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 3.1
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 27 4.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 5.4
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 26 7.1
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 7.1
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 26 7.1
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 7.1
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 25 9.4
SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.4
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.4
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 9.4
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.11
Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Frame = +3
Query: 6 RRAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKE----EEFENTRKNHQR- 170
R + R+A+ E EE + + EL ++R++ +R ++K+ +E E R+ +R
Sbjct: 561 REKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERL 620
Query: 171 ----ALDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQA 338
A +++ R+K++ E ELE + E +K +K+ Q
Sbjct: 621 AEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQ 680
Query: 339 QIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRARRQAEQELSD 518
+ + A + ER+ ++ EE R E ++ + E+ L +
Sbjct: 681 EADREKMAREQRLREEEEKRI---LEERKRREKLDKEEEERRRRELLEKESEEKERRLRE 737
Query: 519 A 521
A
Sbjct: 738 A 738
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.11
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 1/151 (0%)
Frame = +3
Query: 27 RKAEAALEQEENKV-LRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXX 203
R +++E+N + L A + E + R+QE +E E R + L+ +
Sbjct: 469 RTQNREIDEEKNHLRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREE 528
Query: 204 XXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXX 383
+ K+ + INELE + +E I Y+ ++KD +
Sbjct: 529 NEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNA 588
Query: 384 XXXXXXXLGISERRANALQNELEESRTLLEQ 476
L N LQ+ +E + LE+
Sbjct: 589 FQYKDNDLRRFHESINKLQDREKELTSNLEK 619
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +3
Query: 264 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI-SERRANALQ 440
E ++ L NAE++K+ R + +++DL ++L + SE+R N L+
Sbjct: 87 EEKLQLTETKCRNAESEKS--RVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLK 144
Query: 441 NELEESRTLLEQADRARRQAE---QELSDAHE 527
+L ++ TLL + + +SD+HE
Sbjct: 145 KQLVDAETLLSSTQHQLTELKDVMHSMSDSHE 176
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.1 bits (67), Expect = 0.19
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +3
Query: 240 KKLEADINELEIALDHANKANAEAQKN-IKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 416
KKLE D+N L L+ N A+ E+ KN I+ + K L L L
Sbjct: 753 KKLENDLNLLTEKLNKKN-ADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLSEE 811
Query: 417 ERRANALQNELEESRTLLEQADRARRQAEQELS 515
R LQ++L + + +E + A ELS
Sbjct: 812 STRLQELQSQLNQDKNQIETLNERISAAADELS 844
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.25
Identities = 27/161 (16%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Frame = +3
Query: 54 EENKVLRAQLELSQVR-QEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXX 230
++++ +QLE V +E +R I + + E+ + ++ S++
Sbjct: 360 KDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKD 419
Query: 231 RMKKKLEADINELEIALDHANKANAE-------AQKNIKRYQAQIKDLQTALXXXXXXXX 389
+M K++ + + E +L HA AE K IK ++ +DL+ L
Sbjct: 420 KMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELK 479
Query: 390 XXXXXLGISERRANALQNELEESRTLLEQADRARRQAEQEL 512
+ ++ N L+ +++E + + E + + ++++
Sbjct: 480 EKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDI 520
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/112 (17%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVRQEIDRR---IQEKEEEFENTRKNHQRALDSMQXXXXXX 206
E+ L E N + L+L + + + ++ + E+ + +++ +++ ++++
Sbjct: 653 ESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEA 712
Query: 207 XXXXXXXXRMKKK---LEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 353
+K K LEA N+L +L A NA + + +K L
Sbjct: 713 KNLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVKRL 764
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 102 QEIDRRIQE-KEEEFENTRKNHQRALDSMQ 188
Q +DR +Q+ KE +NT++ HQ+ LD ++
Sbjct: 912 QTLDRLLQKVKEHSEDNTKEKHQQLLDLLE 941
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 78 QLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDS 182
+LEL+ +R+ ++ I EK+EE N K RAL++
Sbjct: 275 ELELTSIRERLESLILEKQEEI-NFWKQRCRALET 308
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 112 TDASKRRRKNSKTHARTTSVPSTP 183
TD S +RRK + R TSVP +P
Sbjct: 395 TDGSMKRRKRRQPSNRKTSVPRSP 418
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 42 ALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRA 173
A++Q+E K L+ +E + + DR+ +E+ + R N R+
Sbjct: 141 AIKQQEQKQLQTLMEKRKYSLDSDRKSKERRHRDRHHRSNQDRS 184
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 49 NKKRTRSSVLSSNCLRSDRRSTDASKRRRK-NSKTHARTTSVPS 177
++KR S+ S++ +SDR S +S R+ S++ +R++SV S
Sbjct: 79 SRKRVSFSLTSNDGAKSDRSSQKSSNSRKSIRSQSRSRSSSVGS 122
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 27 RKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQ 188
++A L+ ++K + QLEL + + E I EKE+E + RK + ++SM+
Sbjct: 86 KQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKE-DLQRKMEELTVESME 138
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 3.1
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Frame = +3
Query: 21 RPRKAEAALEQEE---NKVLRAQLELSQVRQEID------RRIQEKEEEFENTRKNHQRA 173
R R E++ E E NK+ R +S +RQ ID RR++E++EE + ++
Sbjct: 89 RSRTLESSYEDETETANKLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVE 148
Query: 174 LDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALD 284
+ + + LE DI E + D
Sbjct: 149 ISTQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFD 185
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 243 KLEADINELEIALDHANKANAEAQKNIKR 329
KL + + L LDH+N +AE + IKR
Sbjct: 430 KLGPEYSSLSAILDHSNNIHAEILETIKR 458
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFE 146
E AL ++ ++ +EL + +QEKEEE E
Sbjct: 598 EDALHSKDRELANLGVELKSTENRYRQLLQEKEEELE 634
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 331 TRHKSRICRPLSRRSSAPVTMPANSSASRSVA 426
T H RIC+ +SR+++AP P SS + + A
Sbjct: 146 TPHVIRICKSVSRQNAAPA--PTASSFAHTTA 175
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 3 ERRAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEK----EEEFENTRKNHQR 170
E+ + A E+E+ + L + L + +QE +R++QE+ +EE RK+ Q+
Sbjct: 864 EKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQK 923
Query: 171 A 173
A
Sbjct: 924 A 924
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 61 TRSSVLSSNCLRSDRRSTDASKRRRKNSKTHARTTSV 171
T +S+ SSN L R ST+ K R+KN T++ +
Sbjct: 121 TVNSLSSSNQLSVIRSSTNTVKGRKKNPTTNSNWNGI 157
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 282 DHANKANAEAQKNIKRYQAQIKDLQTAL 365
D+ N + +A KN+K YQ + DLQ +L
Sbjct: 661 DYRN-SRLDAIKNVKTYQIKFSDLQESL 687
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.4 bits (53), Expect = 9.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 39 AALEQEENK-VLRAQLE----LSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQ 188
AA+E K VL+AQ E ++Q ++E RR+ +E + +K H++ S Q
Sbjct: 627 AAMESVNQKNVLKAQKEEEERIAQQKREEKRRLAYEESLKRHAKKLHEKKTKSSQ 681
>SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 45 LEQEENKVLRAQLELSQVRQEIDRRIQEKEEE 140
+E+ NK+LRAQ +Q+ +E++ + +E+
Sbjct: 1 MEETVNKILRAQETRAQLYKELEDALNANQEK 32
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 138 LPPSLGCVCRSPV*PETVRAEHGGPCSLLVREPLRLFE 25
L P++G R V PE+ + GP + VR+ + +F+
Sbjct: 259 LKPTVGLTSRYGVIPESEHQDTTGPIARTVRDAVYVFQ 296
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENT 152
E+ L + + +LRAQL+ + ++R Q+ ++FEN+
Sbjct: 273 ESDLNRLKADLLRAQLKKDPNYESLEREYQKACDDFENS 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,118,153
Number of Sequences: 5004
Number of extensions: 31184
Number of successful extensions: 198
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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