Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30871
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 41 8e-04
At5g13340.1 68418.m01535 expressed protein 33 0.29
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 33 0.29
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.29
At1g32190.1 68414.m03959 expressed protein 32 0.50
At1g68790.1 68414.m07863 expressed protein 31 0.66
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 31 0.87
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 31 1.2
At5g25070.1 68418.m02971 expressed protein 30 1.5
At5g12300.1 68418.m01446 C2 domain-containing protein contains P... 30 1.5
At3g14180.1 68416.m01792 expressed protein similar to 6b-interac... 30 1.5
At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical ... 30 2.0
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 29 2.7
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 29 2.7
At4g13540.1 68417.m02111 expressed protein 29 3.5
At1g60870.1 68414.m06852 expressed protein 29 3.5
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 6.1
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 6.1
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 28 6.1
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 28 6.1
At1g27920.1 68414.m03421 microtubule associated protein (MAP65/A... 28 6.1
At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical t... 28 8.1
At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical t... 28 8.1
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 8.1
At2g42060.1 68415.m05201 CHP-rich zinc finger protein, putative 28 8.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 8.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 8.1
At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 28 8.1
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 41.1 bits (92), Expect = 8e-04
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Frame = +3
Query: 24 PRKAEAALEQEENKVL-RAQLELSQVRQEID---RRIQEKEEEFENTRKNH---QRALD- 179
P E NK L ++ ++Q++ E+ RRI E EE+ E + AL+
Sbjct: 319 PHSEPGRKHSESNKELEKSNAHVNQLKHELKTSLRRISELEEKVEMVEVEKLQLEMALNG 378
Query: 180 SMQXXXXXXXXXXXXXXRMK--KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 353
S + ++ KKLEA+ ELE+ L + K + Q+ + + Q + +L
Sbjct: 379 SKEQIEALQSRLKEIEGKLSEMKKLEAENQELELLLGESGKQMEDLQRQLNKAQVNLSEL 438
Query: 354 QT---ALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRARRQAEQELSDAH 524
+T L S+ R + +L E +TLL A+ AE L A+
Sbjct: 439 ETRRAEKLELTMCLNGTKKQLETSQNRLKETERKLTELQTLLHLTKDAKEAAEDGLKAAN 498
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 12 APGRPRKA-EAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQ 188
+P R A E EQE+ L+ + EL ++ +E +RI+E + R + + ++
Sbjct: 63 SPSEHRIAIEVKKEQEDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIE 122
Query: 189 XXXXXXXXXXXXXX--RMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQ 356
++KK+ EA +NE + A + E K ++ ++++ Q
Sbjct: 123 RRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQ 180
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 32.7 bits (71), Expect = 0.29
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = +3
Query: 3 ERRAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQE--KEEEFENTRKNHQRAL 176
ERRA KAE + +E + L QL+ + ++E +RR++E E+ + R R
Sbjct: 687 ERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALEQEKERRIKEAREK 746
Query: 177 DSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQ 356
+ + R+K LE + E +I + N K + + L+
Sbjct: 747 EENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEVLEQAENERKLK 806
Query: 357 TAL 365
AL
Sbjct: 807 EAL 809
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.7 bits (71), Expect = 0.29
Identities = 28/143 (19%), Positives = 56/143 (39%)
Frame = +3
Query: 75 AQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEA 254
A+ ELS++ +EI+ R + +EEE E RK + A + ++ +
Sbjct: 421 AEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKR 480
Query: 255 DINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANA 434
+ E + + EA++ + + + ++ + A E R
Sbjct: 481 EEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRK 540
Query: 435 LQNELEESRTLLEQADRARRQAE 503
+ E+E R E+ +R RR+ E
Sbjct: 541 EREEVERKRR--EEQERKRREEE 561
Score = 27.9 bits (59), Expect = 8.1
Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 4/169 (2%)
Frame = +3
Query: 3 ERRAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDS 182
+R + + EA +EE K + E ++ R+E + +E ++ E R+ +R +
Sbjct: 487 KREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKER--EE 544
Query: 183 MQXXXXXXXXXXXXXXRMKKKLEADINELEIA----LDHANKANAEAQKNIKRYQAQIKD 350
++ +K+ E E E+A + K E ++ I+ Q + ++
Sbjct: 545 VERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKRE 604
Query: 351 LQTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRARRQ 497
+ A + +R A + E E ++ E+ R R+
Sbjct: 605 EEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKERE 653
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 243 SSSCATPQPCP*PRLRGKPAWSRGHAGGSCVCFRILPPSL-GC--VCRSP 103
S C CP PR KP+ S G G C CF+ P+L GC C+ P
Sbjct: 298 SGLCRPSCSCPKPRCP-KPSCSCGCGCGDCGCFKCSCPTLKGCFSCCKKP 346
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 31.5 bits (68), Expect = 0.66
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 1/153 (0%)
Frame = +3
Query: 48 EQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXX 227
E EEN + R Q+E+ ++ + + + EFE + +R+LD
Sbjct: 336 EFEENLIEREQMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVE 395
Query: 228 XRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXL 407
K E + + E AL+ + + +K++ +K+ + AL L
Sbjct: 396 ISHK---EEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERL 452
Query: 408 GISERRANALQNELEESRT-LLEQADRARRQAE 503
+ L++E+EE T +Q R R + E
Sbjct: 453 LEDKECLRKLKDEIEEIGTETTKQESRIREEHE 485
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/96 (19%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +3
Query: 237 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 416
K++ E ++ LE + K + +K++ R + +++DL+ ++ ++
Sbjct: 662 KREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTS----SVN 717
Query: 417 ERRANAL--QNELEESRTLLEQADRARRQAEQELSD 518
E + Q E+EE +LLE+ + ++AE + ++
Sbjct: 718 ELHLEIMKFQKEIEEKESLLEKLQDSLKEAELKANE 753
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQV-RQEIDRRIQEKEEEFENTRKNHQRAL 176
E A E L QLEL + +QE+D+ +Q EEE E + +++L
Sbjct: 588 EVAKVVETQSSLERQLELIETHQQEVDKALQSMEEEAERIYNDERKSL 635
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 LEADINELEIALDHAN--KANAEAQKNIKRYQA---QIKDLQTALXXXXXXXXXXXXXLG 410
LE D ++E +A KA E ++ IKR Q I + L
Sbjct: 599 LEKDKTQMETGKANAELEKAEHEIEETIKRLQEIEKLILSKEKELAISRFQRLRIDSGTA 658
Query: 411 ISERRANALQNELEESRTLLEQADRARRQAEQ 506
+ER A ++LEE+ LLE+A A +AE+
Sbjct: 659 KAERSAALELSDLEEANLLLEEAQEAESEAEK 690
>At5g12300.1 68418.m01446 C2 domain-containing protein contains Pfam
profile PF00168: C2 domain
Length = 374
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/90 (23%), Positives = 34/90 (37%)
Frame = +3
Query: 42 ALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXX 221
+L E+N + E ++ + RR +E EEE E + N + +
Sbjct: 253 SLSDEKNTADSNEKENREITEVSRRRSKEGEEEEEENKMNEETTMQKQIAEMYMRSMQQF 312
Query: 222 XXXRMKKKLEADINELEIALDHANKANAEA 311
K KL D++ DH+N N A
Sbjct: 313 TESLAKMKLPMDLHNKPHEEDHSNNNNNTA 342
>At3g14180.1 68416.m01792 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 443
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 69 LRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRAL 176
++ QLE+SQ++Q+ RR+ + ++RKN+ A+
Sbjct: 398 VKTQLEISQLKQQHGRRMGNTSNDHHHSRKNNINAI 433
>At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical to
plastid heme oxygenase (HY1) [Arabidopsis thaliana]
GI:4877362, heme oxygenase 1 [Arabidopsis thaliana]
GI:4530591 GB:AF132475; annotation updated per Seth J.
Davis at University of Wisconsin-Madison
Length = 282
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 9 RAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNH 164
R GR + AE L+ +E + + ELSQ+ Q + ++ + EE+ KNH
Sbjct: 211 RMIGR-KVAERILDNKELEFYKWDGELSQLLQNVREKLNKVAEEWTREEKNH 261
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQR--ALDSMQXXXXXXX 209
+A+ + E+ + + LSQ +EIDR ++E EE E +K ++ A ++++
Sbjct: 524 KASGKSEKITITNEKGRLSQ--EEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMK 581
Query: 210 XXXXXXXRMKKKLEADINE-LEIALDHANKANAEAQKNIK-RYQAQIKDLQ 356
++ KLE D E +E A A + E Q + K Y ++K+++
Sbjct: 582 NQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVE 632
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQR--ALDSMQXXXXXXX 209
+A+ + E+ + + LSQ +EIDR ++E EE E +K ++ A ++++
Sbjct: 524 KASGKSEKITITNEKGRLSQ--EEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMK 581
Query: 210 XXXXXXXRMKKKLEADINE-LEIALDHANKANAEAQKNIK-RYQAQIKDLQ 356
++ KLE D E +E A A + E Q + K Y ++K+++
Sbjct: 582 NQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVE 632
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 29.1 bits (62), Expect = 3.5
Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
Frame = +3
Query: 21 RPRKAEAALEQEENKVLRAQL-------ELSQVRQEIDRRIQEKEEEFENTRKNHQRALD 179
R R+ L+++E +L ++ E ++R+E+ R Q+ EE+ E K H+
Sbjct: 25 RRRETRRELDEKERVILALKMAETEWRKERKRLREEVKRLRQKMEEKEEGKAKQHEWEW- 83
Query: 180 SMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQT 359
++ R K+ A NEL+ L H A QK + +++L+
Sbjct: 84 VVEQMCLERAVREEAVERWKQLYFAIKNELD-DLIHTTYGEALRQKPQEEVAKAVQELRK 142
Query: 360 ALXXXXXXXXXXXXXLGISERRANALQNELEESRTLL 470
+ + + E++ N + E++ R L
Sbjct: 143 EVKARGETIETLKGRINLMEKQQNGKEREIDLLRQSL 179
>At1g60870.1 68414.m06852 expressed protein
Length = 147
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 30 KAEAALEQEENKVLR-AQLELSQVRQEIDRRIQEKEEEFENTRKNHQR 170
KA AALE E+ + L A+ L + E+DR ++ EE+ T + +R
Sbjct: 39 KAWAALESEQQQELEEAEESLREAELELDRDMEWGMEEYRRTLEEMER 86
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 6.1
Identities = 29/148 (19%), Positives = 50/148 (33%)
Frame = +3
Query: 84 ELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADIN 263
+L + Q RIQE EE+ + K H + + + +
Sbjct: 73 DLELLLQTEKYRIQELEEQVSSLEKKH----GETEADSKGYLGQVAELQSTLEAFQVKSS 128
Query: 264 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQN 443
LE AL+ A + E +N+ ++ K L+ + L N Q
Sbjct: 129 SLEAALNIATENEKELTENLNAVTSEKKKLEATVDEYSVKISESENLLESIRNELNVTQG 188
Query: 444 ELEESRTLLEQADRARRQAEQELSDAHE 527
+LE L+ A + ++L A E
Sbjct: 189 KLESIENDLKAAGLQESEVMEKLKSAEE 216
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 685 RLADELRAEQDHAQTQEKLRKALEHKSRNSS 777
R +EL +Q+ A++Q+K +K EH+ + +S
Sbjct: 1068 RHQEELSVKQNEAKSQDKRQKTAEHEDKEAS 1098
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/114 (19%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVR-QEIDRRIQEKE---EEFENTRKNHQRALDSMQXXXXX 203
E A+ Q EN L ++E+ R ++++ ++++ E +E ++ K ++ +++
Sbjct: 467 EEAVAQVENS-LATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCNREVESTLRFELEA 525
Query: 204 XXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTAL 365
+KLE + EL+I+ D E+Q ++ + ++ ++QT +
Sbjct: 526 IACEKMELENKLEKLEVEKAELQISFDIIKDKYEESQVCLQEIETKLGEIQTEM 579
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/114 (19%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 36 EAALEQEENKVLRAQLELSQVR-QEIDRRIQEKE---EEFENTRKNHQRALDSMQXXXXX 203
E A+ Q EN L ++E+ R ++++ ++++ E +E ++ K ++ +++
Sbjct: 433 EEAVAQVENS-LATEIEVLTCRIKQLEEKLEKLEVEKDELKSEVKCNREVESTLRFELEA 491
Query: 204 XXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTAL 365
+KLE + EL+I+ D E+Q ++ + ++ ++QT +
Sbjct: 492 IACEKMELENKLEKLEVEKAELQISFDIIKDKYEESQVCLQEIETKLGEIQTEM 545
>At1g27920.1 68414.m03421 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 592
Score = 28.3 bits (60), Expect = 6.1
Identities = 29/121 (23%), Positives = 42/121 (34%)
Frame = +3
Query: 3 ERRAPGRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDS 182
ER PGRP K L ++ + + A L ++R D R+++ +K
Sbjct: 120 ERSVPGRPEKKGGTLREQLDSIAPA---LREMRLRKDERVKQFRSVKGEIQKISAEIAGR 176
Query: 183 MQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTA 362
KKLE NEL D N E + + Y I+DL
Sbjct: 177 STYEDSTRKITIDDNDLSNKKLEEYQNELHRLHDEKN----ERLQKVDIYICAIRDLSAT 232
Query: 363 L 365
L
Sbjct: 233 L 233
>At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 27.9 bits (59), Expect = 8.1
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Frame = +3
Query: 18 GRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRAL-DSMQXX 194
G R+ + ++ E+K+L Q + + E++RR++EKE E + AL
Sbjct: 486 GDSREIDEEAKEWEHKLL--QNSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKK 543
Query: 195 XXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXX 374
+ +L A+I L + A K +N+K +AQI DL+
Sbjct: 544 IAEVEDEKRSVQEERNRLLAEIENL-ASDGQAQKLQDVHAQNLKALEAQILDLKKKQESQ 602
Query: 375 XXXXXXXXXXLGISERRANALQNELEESRTLLEQAD-RARRQAEQ 506
S+ A LQ+E++ + Q R +++AEQ
Sbjct: 603 VQLLKQKQK----SDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQ 643
>At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 27.9 bits (59), Expect = 8.1
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Frame = +3
Query: 18 GRPRKAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRAL-DSMQXX 194
G R+ + ++ E+K+L Q + + E++RR++EKE E + AL
Sbjct: 486 GDSREIDEEAKEWEHKLL--QNSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKK 543
Query: 195 XXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXX 374
+ +L A+I L + A K +N+K +AQI DL+
Sbjct: 544 IAEVEDEKRSVQEERNRLLAEIENL-ASDGQAQKLQDVHAQNLKALEAQILDLKKKQESQ 602
Query: 375 XXXXXXXXXXLGISERRANALQNELEESRTLLEQAD-RARRQAEQ 506
S+ A LQ+E++ + Q R +++AEQ
Sbjct: 603 VQLLKQKQK----SDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQ 643
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 27.9 bits (59), Expect = 8.1
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 19/178 (10%)
Frame = +3
Query: 51 QEENKVLRAQ-LELSQVRQEIDRRIQEKEEEFENTRKNH---QRAL----DSMQXXXXXX 206
+EE K+L + L++S QE + IQE E E +++H +R L D +
Sbjct: 424 EEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKERELTGLRDIHETHQRES 483
Query: 207 XXXXXXXXRMKKKLEADINELEIALDHANKAN-------AEAQKNIKRYQAQIKDLQTAL 365
K LE + +L +L+ A + E +K+ Q+++++L T L
Sbjct: 484 STRLSELETQLKLLEQRVVDLSASLNAAEEEKKSLSSMILEITDELKQAQSKVQELVTEL 543
Query: 366 XXXXXXXXXXXXXLG----ISERRANALQNELEESRTLLEQADRARRQAEQELSDAHE 527
L + E ++++E +E A+ ++ Q L+ + E
Sbjct: 544 AESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSSEE 601
>At2g42060.1 68415.m05201 CHP-rich zinc finger protein, putative
Length = 268
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 39 AALEQEENKVLRAQLELSQVRQEID 113
A EQ E+ VLR QLEL +++ E+D
Sbjct: 226 AITEQVEDPVLRQQLELQKLQLELD 250
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 15 PGRPRKAEAALEQEENKVLRAQLELSQV---RQEIDRRIQEKEEE---FENTRKNHQRAL 176
P +P+K +A + E K+ + E+ + RQE + R +++EEE E + Q L
Sbjct: 392 PLQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERRRQEEL 451
Query: 177 DSMQXXXXXXXXXXXXXXRMKKKLEADI 260
++ ++KKLE +
Sbjct: 452 EAQAEEAKRKRKEKEKEKLLRKKLEGKL 479
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 15 PGRPRKAEAALEQEENKVLRAQLELSQV---RQEIDRRIQEKEEE---FENTRKNHQRAL 176
P +P+K +A + E K+ + E+ + RQE + R +++EEE E + Q L
Sbjct: 345 PLQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERRRQEEL 404
Query: 177 DSMQXXXXXXXXXXXXXXRMKKKLEADI 260
++ ++KKLE +
Sbjct: 405 EAQAEEAKRKRKEKEKEKLLRKKLEGKL 432
>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
domain-containing protein contains Pfam profiles PF00168:
C2 domain; contains PF02893: GRAM domain; similar to
Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B
Length(GI:6980525); similar to Synaptotagmin III (SytIII)
(Swiss-Prot:P40748) [Rattus norvegicus]
Length = 1859
Score = 27.9 bits (59), Expect = 8.1
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 17/175 (9%)
Frame = +3
Query: 33 AEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEF---ENTRKN-------HQRALDS 182
A +++ ++L+ Q EL +R+E + Q K+E+ ENTRK + A
Sbjct: 519 ANQKVKEATGRLLKDQPELKALRKEREEAEQYKKEKQLLEENTRKRLSEMDFALKNATSQ 578
Query: 183 MQXXXXXXXXXXXXXXRMKKKLE-ADINELEIA--LDHANKANAEAQKNIKRYQAQIKDL 353
++ +KK++E A I +E A A + + K+I ++ Q L
Sbjct: 579 LEKAFNTAHRLELEQSILKKEMEAAKIKAVESAESFREAKERGERSLKDIHSWEGQKIML 638
Query: 354 QTALXXXXXXXXXXXXXLGISERRANALQNELEESRT----LLEQADRARRQAEQ 506
Q L + ++ R N ++ L++ RT L QA R++ ++
Sbjct: 639 QEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLIRKETKE 693
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,709,401
Number of Sequences: 28952
Number of extensions: 186035
Number of successful extensions: 1087
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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