Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30870
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily ass...    33   0.13 
U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily ass...    33   0.13 
U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical...    30   1.2  
AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical...    30   1.2  
AF016415-2|AAW88413.1|  296|Caenorhabditis elegans Serpentine re...    29   1.6  
Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AF024492-1|AAF98622.2|  314|Caenorhabditis elegans Hypothetical ...    27   6.6  

>U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform b protein.
          Length = 408

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 532 IGRIGYRAPPRVFFFFFYLNVC 467
           IG  G+ APP VF FFF+L  C
Sbjct: 348 IGAFGHEAPPLVFKFFFWLGYC 369


>U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform a protein.
          Length = 406

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 532 IGRIGYRAPPRVFFFFFYLNVC 467
           IG  G+ APP VF FFF+L  C
Sbjct: 346 IGAFGHEAPPLVFKFFFWLGYC 367


>U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.1a protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 123 IRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGVT 290
           + +D+D++G   +G   GY T    +A     L +     +  E+R  GE  ++ PD  T
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 170

Query: 291 YAVTYVANEGG 323
                 A+EGG
Sbjct: 171 QVTIEYASEGG 181


>U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical
           protein C06E7.3b protein.
          Length = 353

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 123 IRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGVT 290
           + +D+D++G   +G   GY T    +A     L +     +  E+R  GE  ++ PD  T
Sbjct: 60  VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 119

Query: 291 YAVTYVANEGG 323
                 A+EGG
Sbjct: 120 QVTIEYASEGG 130


>U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.3a protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 123 IRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGVT 290
           + +D+D++G   +G   GY T    +A     L +     +  E+R  GE  ++ PD  T
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 170

Query: 291 YAVTYVANEGG 323
                 A+EGG
Sbjct: 171 QVTIEYASEGG 181


>AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12b protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 123 IRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGVT 290
           + +D+D++G   +G   GY T    +A     L +     +  E+R  GE  ++ PD  T
Sbjct: 70  VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 129

Query: 291 YAVTYVANEGG 323
                 A+EGG
Sbjct: 130 QVTIEYASEGG 140


>AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12a protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 123 IRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--GEFAYIGPDGVT 290
           + +D+D++G   +G   GY T    +A     L +     +  E+R  GE  ++ PD  T
Sbjct: 52  VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 111

Query: 291 YAVTYVANEGG 323
                 A+EGG
Sbjct: 112 QVTIEYASEGG 122


>AF016415-2|AAW88413.1|  296|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 29 protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -2

Query: 502 RVFFFFFYLNVCIIIRIVSQIAWILITNEN 413
           R+F++ F L+VC  + ++S I+++L  +EN
Sbjct: 42  RLFYYRFVLDVCFGLSLLSYISFLLFYSEN 71


>Z81515-5|CAB04193.2|  238|Caenorhabditis elegans Hypothetical
           protein F26H11.5 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 162 NTGYETSNGIKAQETGQLKNIGTENEALE 248
           NTG     GI A+E+G+ +   TE++ L+
Sbjct: 58  NTGLRRMPGISAEESGETQTFETEDDILD 86


>AF024492-1|AAF98622.2|  314|Caenorhabditis elegans Hypothetical
           protein F14F9.5 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +3

Query: 159 YNTGYETSNGIKAQETGQLKNIG--TENEALEVRGEFAYIGPDGVTYAVTY 305
           Y+T Y TSNGI+   T  + N G   EN   ++      + PD V     Y
Sbjct: 17  YSTSYSTSNGIRLM-TFNIWNSGANVENGQQKIAKHILMVNPDVVALQEVY 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,036,021
Number of Sequences: 27780
Number of extensions: 173207
Number of successful extensions: 486
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)