Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30864
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 50 2e-06
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 49 4e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 46 3e-05
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 44 1e-04
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 44 1e-04
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 43 2e-04
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 43 2e-04
04_03_0920 + 20826876-20829293 31 0.80
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.4
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 3.2
04_03_0923 + 20843477-20845044,20846081-20846996 29 3.2
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 29 4.2
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818 28 5.6
03_01_0303 + 2369607-2371958 28 5.6
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 7.4
07_03_1232 + 25052415-25052918 28 7.4
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 7.4
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362... 27 9.8
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 27 9.8
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +1
Query: 256 LKSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 426
+KSE +GN E ++ ++ + ++AK L ++ G+GTD+ +I ++ T + ++ I
Sbjct: 208 VKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYI 267
Query: 427 SAFYEQLYGKSLESDLKGDTSG 492
A Y + Y KSL + +TSG
Sbjct: 268 KAEYYKKYKKSLAEAIHSETSG 289
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 328 AKELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGTLQ 501
AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG +
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFE 217
Score = 34.3 bits (75), Expect = 0.085
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 328 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGTLQEI 507
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG Q++
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 508 V 510
+
Sbjct: 136 L 136
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGK 238
LRK+MKG GTD+ +I V+ R + I + Y K
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKK 277
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 256 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 423
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 424 ISAFYEQLYGKSLESDLKGDTSG 492
I A Y + Y +SL + +TSG
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSG 332
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 247 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 426
+ L +EL+G+ + ++ + A LH A++G TD A E++C+ + + +
Sbjct: 62 LHRLAAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQLLVV 121
Query: 427 SAFYEQLY----GKSLESDLKGDTSGTLQEIV 510
Y + G LE D+ SG Q ++
Sbjct: 122 RQAYLARFGGGGGGGLEHDVAVRASGDHQRLL 153
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 AKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 465
A+EL+ A +GTDE I + S + ++A Y +Y +SLE
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 259 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 438
K E L +I P ++ K + A++G+GTDE ++ I+ T + ++ I+ Y
Sbjct: 227 KDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAY 285
Query: 439 EQLYGKSLESDLKGDTSGTLQEIV 510
++ LE + GDTSG + ++
Sbjct: 286 QKRNSVPLERAVAGDTSGDYERML 309
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD 241
LRKA +G+GT+E II +L R QR I + YG++
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEE 60
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 307 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 486
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADP 226
Query: 487 S----GTLQEIVRVGC 522
TL+ I+R C
Sbjct: 227 KDEFLSTLRAIIRCFC 242
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +1
Query: 334 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGTLQEIV 510
+L A G GT+E II IL R I Y YG+ L + + SG + V
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAV 77
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 ISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIGTDEEAIIEILCTLSNYGIRT 423
+S+ S L+G++ + L P ++ DA+ G D + ++E++CT + +
Sbjct: 82 VSKHISILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVAL 141
Query: 424 ISAFYEQLYGKSLESDLKGDTSGTLQEIV 510
I Y+ Y SLE D+ TSG+L E++
Sbjct: 142 IRQAYQARYSASLERDVSSRTSGSLNEVL 170
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +1
Query: 265 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQ 444
+L L+ + L +P HF A+ + ++ G+GTDEE + + + + + + Y+
Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339
Query: 445 LYGKSLESDLKGDTSG 492
Y ++ +D++GDTSG
Sbjct: 340 RYNTTVTADVRGDTSG 355
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 116 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNY 232
++RKA++G+GTDE A+I++L R QR EIA ++ Y
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLY 103
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +1
Query: 280 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 459
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 460 LESDLKGDTSG 492
L L + SG
Sbjct: 107 LLDRLHSELSG 117
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 328 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGTLQ 501
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G L
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLA 283
Query: 502 EIVR 513
+++
Sbjct: 284 AVLK 287
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD-FRLANSRVN 268
LRKA KG+GT+EK II +L R QR I + YG++ R N ++
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIH 70
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 259 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 438
K E G L +I P ++ K + A+ G+GTDE ++ I+ T + ++ I Y
Sbjct: 152 KDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAY 210
Query: 439 EQLYGKSLESDLKGDTSGTLQEIV 510
++ LE + DT+ ++I+
Sbjct: 211 QKRNSVPLERAVAKDTTRDYEDIL 234
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +1
Query: 307 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 486
T L H AK LH+ + ++ II IL T S + Y +G + DLK D
Sbjct: 92 TSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADP 151
Query: 487 S----GTLQEIVR 513
GTL+ I+R
Sbjct: 152 KDEFLGTLRAIIR 164
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 331 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGTLQEIV 510
++L A G GT+E+ II IL R I Y + YG+ L L + G + +V
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLV 77
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD 241
L KA +G+GTDE+A+I VL R QR +I T++ NY ++
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 280 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 459
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 460 LESDLKGDTSGTLQ 501
L L+ + SG L+
Sbjct: 61 LIQRLQSELSGDLE 74
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 247 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 408
I L+SEL+G+LE + + A ++ A I D I+EI CT S+
Sbjct: 62 IQRLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 313 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 492
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 247 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 417
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 418 RTISAFYEQLYGKSLESD 471
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 274 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 447
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 448 YGKSL 462
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 259 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 438
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 439 EQLYGKSLESDLKGDTSG 492
++LY SD D +G
Sbjct: 407 DELYNVKQLSDSSSDGNG 424
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE-IAETFKTNYGKDFR 247
L+ A + F DEKA+ D LC+R IV R E I +T K R
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDENIVKTLDPEAAKGSR 397
>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
Length = 557
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 423 HIRILRTTVRQEPGIGLKRRHVGDTSRDCACR 518
H+ I+R+ + ++PGIGL+ G T+ A +
Sbjct: 200 HVEIVRSLLSRDPGIGLRTDKKGQTALHMASK 231
>03_01_0303 + 2369607-2371958
Length = 783
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +2
Query: 170 VLCRRGIVQRLEIAETFKTNYGKDFRLANSRVNSPATWKMSSSH**LPCPTSTLRSSTML 349
V+C RGI R + E K G LANS +N + S LP R + L
Sbjct: 421 VVCDRGITGRADKGEAVKQAGGAAMILANSEINQE---EDSVDVHVLPSTLIGYREAVEL 477
Query: 350 SQELEPTKKPSSR 388
+ T++P +R
Sbjct: 478 KNYVSSTRRPVAR 490
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 337 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 438
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>07_03_1232 + 25052415-25052918
Length = 167
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 444 TVRQEPGIGLKRRHV-GDTSRDCACRLC 524
T + PG LKR H G+ C C LC
Sbjct: 6 TCKLHPGHSLKRHHYGGEEGHACVCALC 33
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -2
Query: 169 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 17
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 16 FNSD 5
F+ D
Sbjct: 200 FHQD 203
>12_01_0461 +
3618414-3618782,3619664-3619794,3620177-3620294,
3620602-3620654,3620758-3620807,3620912-3621010,
3621511-3621620,3621773-3621900,3622071-3622161,
3622610-3622693,3622863-3623083,3623449-3623527,
3624134-3624283,3624326-3624470,3624604-3624983,
3625096-3625197
Length = 769
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -3
Query: 489 RRVAF*VRFQALAVQLFVKCGYGTDTIVGKRAQDLDDGF--FVGSNS*DSI---VELLSV 325
RR+ VR L QL V G+ D ++GK + D+D G N + + ELL
Sbjct: 98 RRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELLGE 157
Query: 324 E-VGQGSHQCDDD 289
E G G QC+ D
Sbjct: 158 EQKGIGVIQCNPD 170
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 342 RCCLRNWNRRRSHHRDPVHAFQLWYPYHIRILRTTVRQEPGIGLKRR 482
RC R W R P H QL P R+ T R E G G RR
Sbjct: 630 RCQYREWIDTRRVLTPPSHVVQLELPEQYRV--TKARFERGEGSSRR 674
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,383,852
Number of Sequences: 37544
Number of extensions: 372462
Number of successful extensions: 1084
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -