Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30859
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.2  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 537 GCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGID 662
           G +  W+VD  + R   G G    +N MR   +G  + +  D
Sbjct: 852 GGIMIWSVDMDDFRGSCGSGKYPLINAMRQELEGYKVKLEYD 893


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 264 SCSGDKTCAIWDIETMQRTTLFN 332
           SC  DK+CA  D   +   TL N
Sbjct: 115 SCHADKSCASDDKSPIDLYTLIN 137


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 316 GPPYSTWAT 342
           GP YSTW+T
Sbjct: 301 GPTYSTWST 309


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 191 RDRFSGAQGRRLRH 232
           R  FSGAQ  RL+H
Sbjct: 232 RTAFSGAQLARLKH 245


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 537 GCVTEWNVDSGEARHVEGQGHGNQVNGMRTT 629
           G V  W++D+ + R + G+G    +N ++ T
Sbjct: 351 GGVMVWSLDTDDFRGICGKGPYPIMNAIKQT 381


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 537 GCVTEWNVDSGEARHVEGQGHGNQVNGMRTT 629
           G V  W++D+ + R + G G    +N ++ T
Sbjct: 352 GGVMVWSLDTDDFRGICGNGPYPILNAIKNT 382


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 537 GCVTEWNVDSGEARHVEGQGHGNQVNGMRTT 629
           G V  W++D+ + R + G G    +N ++ T
Sbjct: 352 GGVMVWSLDTDDFRGICGNGPYPILNAIKNT 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,249
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)