Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30859
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 163 1e-40
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 162 2e-40
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 80 1e-15
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 77 1e-14
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 70 1e-12
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 66 3e-11
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 61 6e-10
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 61 6e-10
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 61 6e-10
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 61 6e-10
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 61 6e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 61 8e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 60 2e-09
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 59 2e-09
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 59 2e-09
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 58 7e-09
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 56 2e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 56 3e-08
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 56 3e-08
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 55 4e-08
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 55 5e-08
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 54 9e-08
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 54 1e-07
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 53 2e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 53 2e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 52 3e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 52 3e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 52 3e-07
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 52 3e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 51 6e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 51 8e-07
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 50 1e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 50 1e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 50 1e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 50 1e-06
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 50 1e-06
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 50 1e-06
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 50 1e-06
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 50 1e-06
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 50 1e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 49 2e-06
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 49 2e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 49 3e-06
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 49 3e-06
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 48 4e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 48 4e-06
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 48 6e-06
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 48 6e-06
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 48 8e-06
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 48 8e-06
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 48 8e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 47 1e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 47 1e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 47 1e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 46 2e-05
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 46 3e-05
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 46 3e-05
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 46 3e-05
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 46 3e-05
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 45 4e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 45 5e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 45 5e-05
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 45 5e-05
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 45 5e-05
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 45 5e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 45 5e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 45 5e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 7e-05
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 44 7e-05
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 44 7e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 44 7e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 44 7e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 44 9e-05
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 44 1e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 44 1e-04
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 44 1e-04
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 44 1e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 43 2e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 43 2e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 43 2e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 43 2e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 43 2e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 3e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 42 3e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 42 3e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 42 4e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 42 5e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 42 5e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 42 5e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 41 7e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 41 7e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 41 7e-04
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 41 9e-04
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 40 0.001
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 40 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.001
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 40 0.001
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.001
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 35 0.001
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 40 0.002
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 40 0.002
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 40 0.002
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 40 0.002
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 40 0.002
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 40 0.002
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 39 0.003
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 39 0.003
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 39 0.003
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 39 0.003
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 39 0.003
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 39 0.003
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 39 0.003
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 38 0.005
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 38 0.006
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.006
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 38 0.008
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 38 0.008
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 38 0.008
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 38 0.008
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 38 0.008
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 37 0.011
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 37 0.011
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 37 0.014
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 37 0.014
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 37 0.014
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 37 0.014
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 37 0.014
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 37 0.014
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 37 0.014
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 36 0.019
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 36 0.019
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 36 0.019
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 36 0.019
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 36 0.019
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 36 0.019
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 36 0.019
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 36 0.019
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.025
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 36 0.025
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 36 0.025
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.032
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 35 0.043
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.043
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 35 0.057
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 35 0.057
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 35 0.057
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 34 0.075
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 34 0.075
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 34 0.075
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 27 0.086
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 34 0.099
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 34 0.099
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 34 0.099
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 34 0.099
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.13
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 33 0.17
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 33 0.17
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.17
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.17
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 33 0.17
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 33 0.17
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 33 0.17
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 33 0.17
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 33 0.17
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 33 0.17
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.17
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.17
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 33 0.17
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 33 0.17
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 33 0.23
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 33 0.23
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 33 0.23
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 33 0.23
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 33 0.23
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 33 0.23
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.23
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.23
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.23
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 33 0.23
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 32 0.30
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 32 0.30
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.40
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 32 0.40
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 32 0.40
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 0.53
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 31 0.53
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.70
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 31 0.70
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 31 0.70
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 31 0.70
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 31 0.70
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 31 0.70
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 31 0.70
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 0.70
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 31 0.92
At3g57610.1 68416.m06418 adenylosuccinate synthetase (ADSS) iden... 30 1.2
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 30 1.2
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 30 1.2
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 30 1.2
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 30 1.2
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 30 1.2
At1g19430.1 68414.m02421 dehydration-responsive protein-related ... 30 1.6
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 29 2.1
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 29 2.1
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 2.1
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 2.1
At3g09000.1 68416.m01053 proline-rich family protein 29 2.1
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 29 2.1
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 29 3.7
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 3.7
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 29 3.7
At3g08670.1 68416.m01007 expressed protein 29 3.7
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 3.7
At2g29125.1 68415.m03540 expressed protein 29 3.7
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 29 3.7
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 28 4.9
At3g62770.2 68416.m07051 transport protein-related weak similari... 28 4.9
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 28 4.9
At1g15670.1 68414.m01881 kelch repeat-containing F-box family pr... 28 4.9
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 28 6.5
At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4) ide... 28 6.5
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 28 6.5
At1g73180.1 68414.m08469 eukaryotic translation initiation facto... 28 6.5
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 28 6.5
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 28 6.5
At1g25180.1 68414.m03127 hypothetical protein 28 6.5
At1g25112.1 68414.m03120 hypothetical protein 28 6.5
At1g25025.1 68414.m03116 hypothetical protein 28 6.5
At5g62570.1 68418.m07852 calmodulin-binding protein similar to c... 27 8.6
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 27 8.6
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 27 8.6
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 27 8.6
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 27 8.6
At1g01560.1 68414.m00073 mitogen-activated protein kinase, putat... 27 8.6
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 163 bits (396), Expect = 1e-40
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++GPPFKF + +EH+ F +RYSPDG+ F + D K +YDG T + GE+
Sbjct: 30 DFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGEL 89
Query: 198 GS-PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD------IETMQRTTLFNMGNAVENQ 356
S HKG +Y +SWSPD K++L+ S DK+ +W+ I ++ +T F E+
Sbjct: 90 ASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDM 149
Query: 357 QVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASH 533
V CLWQ HLI+VSL G ++ D+ DKP +L GH K +T LA+ G N KT+ + S+
Sbjct: 150 LVGCLWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSY 209
Query: 534 DGCVTEW 554
DG + +W
Sbjct: 210 DGLIVKW 216
Score = 46.8 bits (106), Expect = 1e-05
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKT 284
SPDG G DGK+ +Y + LK E H+G + I +SPD S ++
Sbjct: 320 SPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANRE 379
Query: 285 CAIWDIETMQRTTLFNMGNAVENQQVSCL-W--QGKHLISVSLSGVINYLDVDNPDKPK- 452
+WD ET Q L NM +++ L W K + + S+ + +VD P +
Sbjct: 380 AVVWDRETKQ-VKLNNM--LFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRI 436
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
H + +A + TV ++ D V W+++
Sbjct: 437 TARNAHLGGVNAVAFI-DDCTVASSGEDASVRLWHIE 472
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 54 KFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGI 233
K + ++H +RYSPD ++FAS + + ++D T ++K H + +
Sbjct: 347 KEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLN-NMLFHTARINSL 405
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIE 305
+WSP+ K + + S D +++++
Sbjct: 406 AWSPNNKMVATGSIDTCVIVYEVD 429
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 162 bits (393), Expect = 2e-40
Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 8/192 (4%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + +EGPPFKFK + +EH+ F VR++PDGS F + D K +YDG T E+ GE+
Sbjct: 166 DFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGEL 225
Query: 198 GS-PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET----MQRTTLFNMGNA--VENQ 356
S HKG +Y +SWSPDGKQ+L+ S DK+ IWDI TTL G++ V++
Sbjct: 226 SSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDM 285
Query: 357 QVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLA-LHGNGKTVYTASH 533
V CLWQ H+++VSL G I+ + DK GH K ++ LA L GN + + S+
Sbjct: 286 LVGCLWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSY 345
Query: 534 DGCVTEWNVDSG 569
DG + +W + G
Sbjct: 346 DGLICKWMLGRG 357
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
A+ +PDG+ G DGK+ LY L E H+G + I +SPD S
Sbjct: 452 ALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADL 511
Query: 276 DKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-W--QGKHLISVSLSGVINYLDVDNPDK 446
++ +WD + L NM + +++CL W + + SL + +VD P
Sbjct: 512 NREAVVWD-RVSREMKLKNM--LYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPAS 568
Query: 447 PKRVLMG-HNKPITCLALHGNGKTVYTASHDGCVTEWN 557
+ + G H + L + V ++ D C+ W+
Sbjct: 569 SRMTIKGAHLGGVYGLGF-ADDSHVVSSGEDACIRVWS 605
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDG 251
+ H +RYSPD S+FASA + + ++D + E+K + H + ++WSP+
Sbjct: 488 ERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLK-NMLYHSARINCLAWSPNS 546
Query: 252 KQLLSCSGDKTCAIWDIE 305
+ + S D +++++
Sbjct: 547 TMVATGSLDTCVIVYEVD 564
Score = 37.9 bits (84), Expect = 0.006
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 10/206 (4%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE--LKGEIGSPAHKGGVYGISWSPD 248
EH A RYSP+G AS G + ++ GA ++ LK E A G + + WS D
Sbjct: 54 EHAYPATVARYSPNGEWIASGDVSGTVRIW-GAYNDHVLKNEFKVLA--GRIDDLQWSAD 110
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMG--NAVENQQVSCLWQGKHLISVSLSG---V 413
G ++++ K ++ + + N+G + + +SC + + G +
Sbjct: 111 GMRIVASGDGKGKSL--VRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFL 168
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHVE 587
+N+ + P K K H+ + C+ +G T S D G + +
Sbjct: 169 VNFYE-GPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSS 227
Query: 588 GQGHGNQVNGMRTTKDG-SLLTIGID 662
GH + + + DG +LT+ D
Sbjct: 228 DDGHKGSIYAVSWSPDGKQVLTVSAD 253
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQG-HGNQVNGMRTTKD 635
++ H+ I CLA N V T S D CV + VD + + +G H V G+ D
Sbjct: 530 MLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADD 589
Query: 636 GSLLTIGID 662
+++ G D
Sbjct: 590 SHVVSSGED 598
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Frame = +3
Query: 48 PFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPA-----H 212
P+ T H R +V++S DG L ASA D I Y + + I P H
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTY--TINTINDPIAEPVQEFTGH 70
Query: 213 KGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLI 392
+ G+ +++S D + ++S S DKT +WD+ET +G+ V+ Q ++
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNPQSNMIV 129
Query: 393 SVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
S S + DV K +VL H+ P+T + + +G + ++S+DG W+ +G
Sbjct: 130 SGSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 573 ARHVEGQGHGNQVNGMRTTKDGSLLTIG-IDDTL 671
V+ +R + +G + +G +D+TL
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTL 222
Score = 62.5 bits (145), Expect = 2e-10
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
HT +A V ++P ++ S FD + ++D T + + PAH V + ++ DG
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL--PAHSDPVTAVDFNRDGSL 169
Query: 258 LLSCSGDKTCAIWDIETMQ--RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDV 431
++S S D C IWD T +T + + V + S GK ++ +L + ++
Sbjct: 170 IVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP--NGKFILVGTLDNTLRLWNI 227
Query: 432 DNPDKPKRVLMGHNKPITCLALH---GNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHG 602
+ K + GH C++ NGK + + S D CV W ++S + + +GH
Sbjct: 228 SSA-KFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ-KLEGHT 285
Query: 603 NQVNGMRTTKDGSLLTIG-IDDTL 671
V + +L+ G +D T+
Sbjct: 286 ETVMNVACHPTENLIASGSLDKTV 309
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGK 254
H V +S D SA D + L+D T L K IG H + ++++P
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIG---HTNYAFCVNFNPQSN 126
Query: 255 QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD 434
++S S D+T IWD+ T + + ++ V G ++S S G+ D
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLP-AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 435 NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
K ++ N P++ + NGK + + D + WN+ S +
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 51.2 bits (117), Expect = 6e-07
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T+ +++ K H+ AV ++ DGSL S+ +DG ++D T +
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW- 374
+ V + +SP+GK +L + D T +W+I + + + G+ +S +
Sbjct: 194 IDDENP-PVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYT-GHVNAQYCISSAFS 251
Query: 375 --QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVT 548
GK ++S S ++ ++ N K + L GH + + +A H + + S D V
Sbjct: 252 VTNGKRIVSGSEDNCVHMWEL-NSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Query: 549 EW 554
W
Sbjct: 311 IW 312
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 76.6 bits (180), Expect = 1e-14
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H ++++P G+L AS D +IFL+ + K + HK + + W+ DG Q
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWR-VHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
++S S DKT WD+ET ++ ++ N +IS S G D+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM-- 168
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNG 617
+ IT ++ ++T D V W++ GEA + +GH + + G
Sbjct: 169 RQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEAT-MTLEGHQDTITG 227
Query: 618 MRTTKDGS-LLTIGIDDTL 671
M + DGS LLT G+D+ L
Sbjct: 228 MSLSPDGSYLLTNGMDNKL 246
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYD----GATSEL 185
DN + V++ + T + H + SPDGS + G D K+ ++D +
Sbjct: 201 DNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRC 260
Query: 186 KGEIGSPAH--KGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNM 335
H + + SWSPDG ++ + S D+ IWD T R T++ +
Sbjct: 261 VKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD--TTSRRTIYKL 310
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +3
Query: 441 DKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGM 620
+ P +L GH + + + G + + SHD + W V + +GH N + +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 621 RTTKDGSLLTIGIDD 665
T DGS + D
Sbjct: 103 HWTSDGSQIVSASPD 117
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
AV +S + G D + ++D E + H+ + G+S SPDG LL+
Sbjct: 185 AVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL--EGHQDTITGMSLSPDGSYLLTNGM 242
Query: 276 DKTCAIWDI 302
D +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 33.1 bits (72), Expect = 0.17
Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 8/199 (4%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLL-SCSG 275
+ ++ DGS SA D + +D T + ++ H V + G L+ S S
Sbjct: 102 LHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE--HSSFVNSCCPTRRGPPLIISGSD 159
Query: 276 DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKR 455
D T +WD+ QR + + + VS + + + + D+ +
Sbjct: 160 DGTAKLWDMR--QRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDL-RKGEATM 216
Query: 456 VLMGHNKPITCLALHGNGKTVYTASHDG--CVTEWNVDSGEARHV---EGQGHGNQVNGM 620
L GH IT ++L +G + T D CV + + + R V EG H + N +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 621 RT--TKDGSLLTIGIDDTL 671
+ + DG+ +T G D +
Sbjct: 277 KCSWSPDGTKVTAGSSDRM 295
Score = 31.1 bits (67), Expect = 0.70
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Frame = +3
Query: 18 DNTIAVFEGPPF--KFKCTK----QEHTRFAQAVR--YSPDGSLFASAGFDGKIFLYDGA 173
DN + V++ P+ + +C K +H ++ +SPDG+ + D + ++D
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD-- 300
Query: 174 TSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
T+ + P H G V + P + SCS DK + +I
Sbjct: 301 TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 70.1 bits (164), Expect = 1e-12
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 1/209 (0%)
Frame = +3
Query: 48 PFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVY 227
P++ T + HT V++S DG+L ASA D + L+ L H G+
Sbjct: 32 PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY--EGHSSGIS 89
Query: 228 GISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLS 407
++WS D S S D T IWD + G+ V+ ++S S
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 408 GVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVE 587
I +V K R++ H+ PI+ + + +G + +ASHDG W+ G
Sbjct: 150 ETIRIWEVKT-GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 588 GQGHGNQVNGMRTTKDGSLLTIG-IDDTL 671
V+ + + +G + + +D TL
Sbjct: 209 IDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Score = 36.3 bits (80), Expect = 0.019
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE-LKGE 194
D TI ++E K + H+ +V ++ DGSL SA DG ++D LK
Sbjct: 149 DETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 195 IGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLF--NMGNAVENQQVSC 368
I + V +SP+GK +L + D T + + T + ++ +
Sbjct: 209 IDDKS--PAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFS 266
Query: 369 LWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASH--DGC 542
+ GK+++S S + D+ + +R L GH + ++ H + ++ + D
Sbjct: 267 VTNGKYIVSGSEDNCVYLWDLQARNILQR-LEGHTDAVISVSCHPVQNEISSSGNHLDKT 325
Query: 543 VTEWNVDS 566
+ W D+
Sbjct: 326 IRIWKQDA 333
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/91 (20%), Positives = 38/91 (41%)
Frame = +3
Query: 393 SVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
S +G + + P + + L GH I+C+ +G + +AS D + W+ +
Sbjct: 17 STGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
Query: 573 ARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
H +GH + ++ + + D DD
Sbjct: 77 LIH-RYEGHSSGISDLAWSSDSHYTCSASDD 106
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 65.7 bits (153), Expect = 3e-11
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 6/203 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H V +SPDG AS D + L+D T HK V ++WSPDGK
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTE--TPLFTCKGHKNWVLTVAWSPDGKH 165
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD- 434
L+S S W+ + + G+ +S W+ HL S V + D D
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGIS--WEPVHLSSPCRRFVTSSKDGDA 223
Query: 435 -----NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGH 599
K L GH +TC+ G+G +YT S D + W G+ E +GH
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIR-ELKGH 281
Query: 600 GNQVNGMRTTKDGSLLTIGIDDT 668
G+ +N + + + L T D T
Sbjct: 282 GHWINSLALSTEYVLRTGAFDHT 304
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/77 (41%), Positives = 41/77 (53%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + V +SPDG ASA FD + L++G T + H G VY +SWS D +
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG--HVGPVYQVSWSADSRL 416
Query: 258 LLSCSGDKTCAIWDIET 308
LLS S D T IW+I T
Sbjct: 417 LLSGSKDSTLKIWEIRT 433
Score = 60.5 bits (140), Expect = 1e-09
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QGK 383
H V +S+SPDGKQL S SGD T +WD+ T T LF +N ++ W GK
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT--ETPLFTC-KGHKNWVLTVAWSPDGK 164
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLA-----LHGNGKTVYTASHDGCVT 548
HL+S S SG I + + L GH K IT ++ L + T+S DG
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 549 EWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDDTL 671
W++ ++ + GH V ++ DG + T D T+
Sbjct: 225 IWDITLKKS-IICLSGHTLAVTCVKWGGDGIIYTGSQDCTI 264
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D ++ ++ G +F + H V +S D L S D + +++ T +LK ++
Sbjct: 381 DKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDL 440
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW 296
P H V+ + WSPDG++++S D+ +W
Sbjct: 441 --PGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + H + V +SPDG S G+I ++ EL+G HK + GISW P
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGS-PLTGHKKWITGISWEP 204
Query: 246 -----DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKHLISVSLS 407
++ ++ S D IWDI T++++ + G+ + V+C+ W G +I
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDI-TLKKSIICLSGHTL---AVTCVKWGGDGIIYTGSQ 260
Query: 408 GVINYLDVDNPDKPKRVLMGHNKPITCLAL 497
+ K R L GH I LAL
Sbjct: 261 DCTIKMWETTQGKLIRELKGHGHWINSLAL 290
Score = 44.0 bits (99), Expect = 9e-05
Identities = 37/141 (26%), Positives = 65/141 (46%)
Frame = +3
Query: 132 SAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETM 311
S D +FL++ + S+ + + H+ V + +SPDGK + S S DK+ +W+ T
Sbjct: 334 SGSDDFTMFLWEPSVSK-QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITG 392
Query: 312 QRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCL 491
Q T+F G+ QVS + L+S S + ++ K K+ L GH + +
Sbjct: 393 QFVTVFR-GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI-RTKKLKQDLPGHADEVFAV 450
Query: 492 ALHGNGKTVYTASHDGCVTEW 554
+G+ V + D + W
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMR 623
+PK+ L GH + + + +GK + +AS D V WN +G+ V +GH V +
Sbjct: 351 QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTV-FRGHVGPVYQVS 409
Query: 624 TTKDGSLLTIGIDDT 668
+ D LL G D+
Sbjct: 410 WSADSRLLLSGSKDS 424
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTK 632
+ + GH + + C++ +GK + + S D V W++ + E +GH N V + +
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT-ETPLFTCKGHKNWVLTVAWSP 161
Query: 633 DGSLLTIG 656
DG L G
Sbjct: 162 DGKHLVSG 169
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDG 170
+D+T+ ++E K K H AV +SPDG S G D + L+ G
Sbjct: 422 KDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWKG 473
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++ + + T +EH VR+ P+ + A++ FD I ++D +
Sbjct: 529 DKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 588
Query: 198 GSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW 374
S H V I + P +LL SC + WDI + V Q +
Sbjct: 589 IS-GHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRT--- 644
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
G+ L + S ++ D++N +K + GH+ + + NG+ V + S D V W
Sbjct: 645 -GQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLW 701
Query: 555 NVDSGEARHVEGQGHGNQVNGM 620
++ SG+ H E GN+ + +
Sbjct: 702 SLSSGDCIH-ELSNSGNKFHSV 722
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFK---CTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
R++++ PF F C ++ ++ +S DG L ASAG D K+F+++ T ++
Sbjct: 484 RNSSVHTETSKPFSFNEVSCIRKSASKVI-CCSFSYDGKLLASAGHDKKVFIWNMETLQV 542
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ AH + + + P+ QL + S DKT IWD
Sbjct: 543 ESTPEEHAHI--ITDVRFRPNSTQLATSSFDKTIKIWD 578
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
S+S DGK L S DK IW++ET+Q +T + + + V L + S
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITD--VRFRPNSTQLATSSFDK 572
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHV 584
I D +P R + GH P+ + H KT S D + W++++ R V
Sbjct: 573 TIKIWDASDPGYFLRTISGHAAPVMSIDFHPK-KTELLCSCDSNNDIRFWDINASCVRAV 631
Query: 585 EG 590
+G
Sbjct: 632 KG 633
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VR+ P F +A + + ++D + + I H V+ + WSP+G+ + S S D
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-GHSSNVHSVCWSPNGELVASVSED 696
Query: 279 KTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPK- 452
+W + + L N GN S ++ + + + G +++ N + K
Sbjct: 697 AV-KLWSLSSGDCIHELSNSGNKFH----SVVFHPSYPDLLVIGGY-QAIELWNTMENKC 750
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ GH I+ LA + V +ASHD V W
Sbjct: 751 MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++ + + T +EH VR+ P+ + A++ FD I ++D +
Sbjct: 531 DKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 198 GSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW 374
S H V I + P +LL SC + WDI + V Q +
Sbjct: 591 IS-GHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRT--- 646
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
G+ L + S ++ D++N +K + GH+ + + NG+ V + S D V W
Sbjct: 647 -GQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLW 703
Query: 555 NVDSGEARHVEGQGHGNQVNGM 620
++ SG+ H E GN+ + +
Sbjct: 704 SLSSGDCIH-ELSNSGNKFHSV 724
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFK---CTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
R++++ PF F C ++ ++ +S DG L ASAG D K+F+++ T ++
Sbjct: 486 RNSSVHTETSKPFSFNEVSCIRKSASKVI-CCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ AH + + + P+ QL + S DKT IWD
Sbjct: 545 ESTPEEHAHI--ITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
S+S DGK L S DK IW++ET+Q +T + + + V L + S
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITD--VRFRPNSTQLATSSFDK 574
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHV 584
I D +P R + GH P+ + H KT S D + W++++ R V
Sbjct: 575 TIKIWDASDPGYFLRTISGHAAPVMSIDFHPK-KTELLCSCDSNNDIRFWDINASCVRAV 633
Query: 585 EG 590
+G
Sbjct: 634 KG 635
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VR+ P F +A + + ++D + + I H V+ + WSP+G+ + S S D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-GHSSNVHSVCWSPNGELVASVSED 698
Query: 279 KTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPK- 452
+W + + L N GN S ++ + + + G +++ N + K
Sbjct: 699 AV-KLWSLSSGDCIHELSNSGNKFH----SVVFHPSYPDLLVIGGY-QAIELWNTMENKC 752
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ GH I+ LA + V +ASHD V W
Sbjct: 753 MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++ + + T +EH VR+ P+ + A++ FD I ++D +
Sbjct: 531 DKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 198 GSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW 374
S H V I + P +LL SC + WDI + V Q +
Sbjct: 591 IS-GHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRT--- 646
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
G+ L + S ++ D++N +K + GH+ + + NG+ V + S D V W
Sbjct: 647 -GQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLW 703
Query: 555 NVDSGEARHVEGQGHGNQVNGM 620
++ SG+ H E GN+ + +
Sbjct: 704 SLSSGDCIH-ELSNSGNKFHSV 724
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFK---CTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
R++++ PF F C ++ ++ +S DG L ASAG D K+F+++ T ++
Sbjct: 486 RNSSVHTETSKPFSFNEVSCIRKSASKVI-CCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ AH + + + P+ QL + S DKT IWD
Sbjct: 545 ESTPEEHAHI--ITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
S+S DGK L S DK IW++ET+Q +T + + + V L + S
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITD--VRFRPNSTQLATSSFDK 574
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHV 584
I D +P R + GH P+ + H KT S D + W++++ R V
Sbjct: 575 TIKIWDASDPGYFLRTISGHAAPVMSIDFHPK-KTELLCSCDSNNDIRFWDINASCVRAV 633
Query: 585 EG 590
+G
Sbjct: 634 KG 635
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VR+ P F +A + + ++D + + I H V+ + WSP+G+ + S S D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-GHSSNVHSVCWSPNGELVASVSED 698
Query: 279 KTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPK- 452
+W + + L N GN S ++ + + + G +++ N + K
Sbjct: 699 AV-KLWSLSSGDCIHELSNSGNKFH----SVVFHPSYPDLLVIGGY-QAIELWNTMENKC 752
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ GH I+ LA + V +ASHD V W
Sbjct: 753 MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++ + + T +EH VR+ P+ + A++ FD I ++D +
Sbjct: 531 DKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 198 GSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW 374
S H V I + P +LL SC + WDI + V Q +
Sbjct: 591 IS-GHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRT--- 646
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
G+ L + S ++ D++N +K + GH+ + + NG+ V + S D V W
Sbjct: 647 -GQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLW 703
Query: 555 NVDSGEARHVEGQGHGNQVNGM 620
++ SG+ H E GN+ + +
Sbjct: 704 SLSSGDCIH-ELSNSGNKFHSV 724
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFK---CTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
R++++ PF F C ++ ++ +S DG L ASAG D K+F+++ T ++
Sbjct: 486 RNSSVHTETSKPFSFNEVSCIRKSASKVI-CCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ AH + + + P+ QL + S DKT IWD
Sbjct: 545 ESTPEEHAHI--ITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
S+S DGK L S DK IW++ET+Q +T + + + V L + S
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITD--VRFRPNSTQLATSSFDK 574
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHV 584
I D +P R + GH P+ + H KT S D + W++++ R V
Sbjct: 575 TIKIWDASDPGYFLRTISGHAAPVMSIDFHPK-KTELLCSCDSNNDIRFWDINASCVRAV 633
Query: 585 EG 590
+G
Sbjct: 634 KG 635
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VR+ P F +A + + ++D + + I H V+ + WSP+G+ + S S D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-GHSSNVHSVCWSPNGELVASVSED 698
Query: 279 KTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPK- 452
+W + + L N GN S ++ + + + G +++ N + K
Sbjct: 699 AV-KLWSLSSGDCIHELSNSGNKFH----SVVFHPSYPDLLVIGGY-QAIELWNTMENKC 752
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ GH I+ LA + V +ASHD V W
Sbjct: 753 MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D + ++ + + T +EH VR+ P+ + A++ FD I ++D +
Sbjct: 531 DKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT 590
Query: 198 GSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW 374
S H V I + P +LL SC + WDI + V Q +
Sbjct: 591 IS-GHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRT--- 646
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
G+ L + S ++ D++N +K + GH+ + + NG+ V + S D V W
Sbjct: 647 -GQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLW 703
Query: 555 NVDSGEARHVEGQGHGNQVNGM 620
++ SG+ H E GN+ + +
Sbjct: 704 SLSSGDCIH-ELSNSGNKFHSV 724
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFK---CTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
R++++ PF F C ++ ++ +S DG L ASAG D K+F+++ T ++
Sbjct: 486 RNSSVHTETSKPFSFNEVSCIRKSASKVI-CCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ AH + + + P+ QL + S DKT IWD
Sbjct: 545 ESTPEEHAHI--ITDVRFRPNSTQLATSSFDKTIKIWD 580
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
S+S DGK L S DK IW++ET+Q +T + + + V L + S
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITD--VRFRPNSTQLATSSFDK 574
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD--GCVTEWNVDSGEARHV 584
I D +P R + GH P+ + H KT S D + W++++ R V
Sbjct: 575 TIKIWDASDPGYFLRTISGHAAPVMSIDFHPK-KTELLCSCDSNNDIRFWDINASCVRAV 633
Query: 585 EG 590
+G
Sbjct: 634 KG 635
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VR+ P F +A + + ++D + + I H V+ + WSP+G+ + S S D
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-GHSSNVHSVCWSPNGELVASVSED 698
Query: 279 KTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPK- 452
+W + + L N GN S ++ + + + G +++ N + K
Sbjct: 699 AV-KLWSLSSGDCIHELSNSGNKFH----SVVFHPSYPDLLVIGGY-QAIELWNTMENKC 752
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ GH I+ LA + V +ASHD V W
Sbjct: 753 MTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.9 bits (141), Expect = 8e-10
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Frame = +3
Query: 60 KCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPA--HKGGVYGI 233
K E ++ + ++ +G+L A+ DG+ ++ L GE+ S HKG ++ +
Sbjct: 317 KGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWT-----LNGELISTLSKHKGPIFSL 371
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
W+ G LL+ S D+T +WD++ + F + + W+ + S +
Sbjct: 372 KWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS---GPTLDVDWRNNVSFATSSTDS 428
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQ 593
+ YL +P + GH + C+ G + + S D WN+ H + +
Sbjct: 429 MIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH-DLR 487
Query: 594 GHGNQVNGMRTTKDG 638
H ++ +R + G
Sbjct: 488 EHTKEIYTIRWSPTG 502
Score = 49.2 bits (112), Expect = 2e-06
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Frame = +3
Query: 126 FASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
FA++ D I+L G T K G H+G V + W P G L SCS D T IW+I
Sbjct: 421 FATSSTDSMIYLCKIGETRPAKTFTG---HQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Query: 303 ETMQRTTLFNMGNAVENQQVSCLWQ----GKH-------LISVSLSGVINYLDVDNPDKP 449
+ Q T + ++ + + + W G + L S S + D + K
Sbjct: 478 K--QSTFVHDLREHTK-EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAEL-GKM 533
Query: 450 KRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
GH +P+ LA NG+ + + S D + W++ G+
Sbjct: 534 LCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGK 574
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGS---------LFASAGFDGKIFLYDG 170
D+T ++ F +EHT+ +R+SP G ASA FD + L+D
Sbjct: 469 DSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDA 528
Query: 171 ATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE 305
++ H+ VY +++SP+G+ + S S DK+ IW I+
Sbjct: 529 ELGKMLCSFNG--HREPVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/94 (20%), Positives = 45/94 (47%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D+T+ +++ K C+ H ++ +SP+G AS D I ++ ++ +
Sbjct: 520 DSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKI---V 576
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ GG++ + W+ +G ++ +C D + + D
Sbjct: 577 KTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
H V +WSP L S SGD T IW I
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSI 294
Score = 27.9 bits (59), Expect = 6.5
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +3
Query: 231 ISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QGKHLISVSL 404
+ W+ +G L + S D IW + +TL + S W +G +L++ S+
Sbjct: 330 LDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPI----FSLKWNKKGDYLLTGSV 385
Query: 405 SGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHV 584
DV ++ K+ H+ P + N + T+S D + + GE R
Sbjct: 386 DRTAVVWDV-KAEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDSMIYLCKI--GETRPA 441
Query: 585 EG-QGHGNQVNGMRTTKDGSLLTIGIDDT 668
+ GH +VN ++ GSLL DD+
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDS 470
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H+ F Q V S DG S +DG++ L+D AT E H V +++S D +Q
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRF--VGHTKDVLSVAFSTDNRQ 119
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH-----LISVSLSGVINY 422
++S S D+T +W+ + T+ + VSC+ + ++S S +
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADG--HKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 423 LDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
++ N K + L GH+ + +A+ +G + DG + W++ G+
Sbjct: 178 WNLQN-CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 7/209 (3%)
Frame = +3
Query: 60 KCTKQEHTRFAQAVRYSPDGS-LFASAGFDGKIFLYDGATSELKGEIGS---PAHKGGVY 227
K T HT A+ D S + ++ D I L+ + + H V
Sbjct: 8 KGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQ 67
Query: 228 GISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLS 407
+ S DG+ LS S D +WD+ T + T F +G+ + V+ + ++S S
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLATGESTRRF-VGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 408 GVINYLDVDNPDKPK-RVLMGHNKPITCLALHGNG--KTVYTASHDGCVTEWNVDSGEAR 578
I + K GH + ++C+ N T+ +AS D V WN+ + + R
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 579 HVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
+ GH +N + + DGSL G D
Sbjct: 187 NTLA-GHSGYLNTVAVSPDGSLCASGGKD 214
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/97 (30%), Positives = 50/97 (51%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T+ V+ K + T H+ + V SPDGSL AS G DG I L+D A + ++
Sbjct: 172 DKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK---KL 228
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
S ++ + +SP+ + L + + + IWD+E+
Sbjct: 229 YSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLES 264
Score = 35.1 bits (77), Expect = 0.043
Identities = 40/201 (19%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Frame = +3
Query: 15 RDNTIAVFEG-PPFKFKCTKQE-HTRFAQAVRYSPDGSL--FASAGFDGKIFLYDGATSE 182
RD TI ++ K+ ++ + H + VR+SP+ + SA +D + +++ +
Sbjct: 125 RDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Query: 183 LKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVE---- 350
L+ + H G + ++ SPDG S D +WD+ ++ G+ +
Sbjct: 185 LRNTLAG--HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 242
Query: 351 --NQQVSC--LWQGKHLISVSLSGVINYLDVDNPDKPKRV-----LMGHNKPITCLALH- 500
N+ C + + V+ L VD + ++ + K I C +L+
Sbjct: 243 SPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNW 302
Query: 501 -GNGKTVYTASHDGCVTEWNV 560
+G T+++ DG + W +
Sbjct: 303 SADGNTLFSGYTDGVIRVWGI 323
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H+ F + V S DG S +DG++ L+D AT E H V +++S D +Q
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF--VGHTKDVLSVAFSTDNRQ 119
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH-----LISVSLSGVINY 422
++S S D+T +W+ + T+ + G+ + VSC+ + ++S S +
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTI-SEGDG-HKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 423 LDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
++ N K + L+GH+ + +A+ +G + DG + W++ G+
Sbjct: 178 WNLQN-CKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 48.0 bits (109), Expect = 6e-06
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 7/203 (3%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGS-LFASAGFDGKIFLYDGATSELKGEIGS---PAHKGGVYGISWSP 245
HT A+ D S + +A D I L+ + + H V + S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 246 DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
DG+ LS S D +WD+ T + T F +G+ + V+ + ++S S I
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRRF-VGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 426 DVDNPDKPK-RVLMGHNKPITCLALHGNG--KTVYTASHDGCVTEWNVDSGEARHVEGQG 596
+ K GH + ++C+ N T+ +AS D V WN+ + + R+ G
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN-SLVG 191
Query: 597 HGNQVNGMRTTKDGSLLTIGIDD 665
H +N + + DGSL G D
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKD 214
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/97 (29%), Positives = 50/97 (51%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T+ V+ K + + H+ + V SPDGSL AS G DG I L+D A + ++
Sbjct: 172 DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK---KL 228
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
S ++ + +SP+ + L + + + IWD+E+
Sbjct: 229 YSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLES 264
Score = 35.5 bits (78), Expect = 0.032
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSL--FASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDG 251
H + VR+SP+ + SA +D + +++ +L+ + H G + ++ SPDG
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL--VGHSGYLNTVAVSPDG 205
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVE------NQQVSC--LWQGKHLISVSLS 407
S D +WD+ ++ G+ + N+ C + +
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESK 265
Query: 408 GVINYLDVDNPDKPKR----VLMGHNKP-ITCLALH--GNGKTVYTASHDGCVTEWNV 560
V+ L VD + ++ V G+ K I C +L+ +G T+++ DG V W +
Sbjct: 266 SVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCT-----KQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE 182
DNT+ ++E T ++ HTR ++ +SP G L A+A FDG ++ SE
Sbjct: 48 DNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSE 107
Query: 183 LKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
+ H+ V +SW+ G L +CS DK+ IW++
Sbjct: 108 FECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Frame = +3
Query: 210 HKGGVYGISWSP-----DGKQ--LLSCSGDKTCAIWDIETMQRT-TLFNMGNAVENQQV- 362
H V+ ++W+P DG L SCSGD T IW+ ++ R+ T + + V
Sbjct: 19 HTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVR 78
Query: 363 SCLW--QGKHLISVSLSGVIN-YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASH 533
SC W G+ L + S G + + + + L GH + ++ + +G + T S
Sbjct: 79 SCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSR 138
Query: 534 DGCVTEWNVDSG 569
D V W V G
Sbjct: 139 DKSVWIWEVLEG 150
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNM-GNAVENQQVSCLWQGKH 386
H V +WSP G+ L + S D T IW + + + G+ E + VS G
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 387 LISVSLSGVINYLDV--DNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW-- 554
L + S + +V N VL GH + + + H +++ S+D + W
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWS 192
Query: 555 NVDSGEARHVEGQGHGNQVNGMRTT 629
D GE + V+ G N NG +T
Sbjct: 193 EDDDGEYQCVQTLGESN--NGHSST 215
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Frame = +3
Query: 33 VFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLY-----DGATS--ELKG 191
V EG + HT+ + V++ P + S +D I ++ DG + G
Sbjct: 147 VLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLG 206
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW--DIETMQ 314
E + H V+ IS++ G ++++CS D T IW DI MQ
Sbjct: 207 ESNN-GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQ 248
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 57.6 bits (133), Expect = 7e-09
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDG--KIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
AV SPD A A D K+F D LK + HK V I S DG+ +++
Sbjct: 545 AVAISPDAKHIAVALLDSTVKVFYMDS----LKFYLSLYGHKLPVMCIDISSDGELIVTG 600
Query: 270 SGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDK 446
S DK IW ++ ++F G++V V + +L S+ ++ Y D D +
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIFAHGDSVMG--VKFVRNTHYLFSIGKDRLVKYWDADKFEH 658
Query: 447 PKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
L GH+ I CLA+ G + T SHD + W+
Sbjct: 659 -LLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 52.0 bits (119), Expect = 3e-07
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRT-------TLFNMGNAVENQQVS 365
AH G ++ I+ P+ ++ S D W+ + Q++ T+ N+ + N V
Sbjct: 485 AHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVL 544
Query: 366 CLW---QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD 536
+ KH+ L + +D+ K L GH P+ C+ + +G+ + T S D
Sbjct: 545 AVAISPDAKHIAVALLDSTVKVFYMDSL-KFYLSLYGHKLPVMCIDISSDGELIVTGSQD 603
Query: 537 GCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGS-LLTIGID 662
+ W +D G+ H HG+ V G++ ++ L +IG D
Sbjct: 604 KNLKIWGLDFGDC-HKSIFAHGDSVMGVKFVRNTHYLFSIGKD 645
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/97 (29%), Positives = 45/97 (46%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D +I +++ + H A+RY+ GS+ AS D I L+D E G
Sbjct: 85 DGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWD-VVGE-SGLF 142
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
H+ V + + GK+L+S S DK +WD+ET
Sbjct: 143 RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/101 (22%), Positives = 38/101 (37%)
Frame = +3
Query: 12 LRDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKG 191
L D+T+ VF KF + H + S DG L + D + ++ +
Sbjct: 559 LLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHK 618
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
I AH V G+ + + L S D+ WD + +
Sbjct: 619 SIF--AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFE 657
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDG 638
L GH +T L GK + ++S D + W++++ + GH ++V + T +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIV-SGHHSEVWSVDTDPEE 202
Query: 639 SLLTIGIDD 665
+ G D
Sbjct: 203 RYVVTGSAD 211
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 216 GGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLIS 395
G + + W P+ + + S DKT +WD++T + +F +G+ ++ G+++ S
Sbjct: 500 GHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIF-IGHRSMVLSLAMSPDGRYMAS 558
Query: 396 VSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE- 572
G I D+ + LMGHN + L+ G G + + S D V W+V S
Sbjct: 559 GDEDGTIMMWDLSTA-RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
Query: 573 -ARHVEGQGHGNQVNGMRT 626
+ E G+ N++ +RT
Sbjct: 618 LTKAEEKNGNSNRLRSLRT 636
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGN-AVENQQVSCLWQGKH 386
H G VY ++SP G +LS S D T +W + + N V + Q S G +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF--GHY 474
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
S S +D +P R++ GH ++ + H N + T S D V W+V +
Sbjct: 475 FASCSHDRTARIWSMDR-IQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Query: 567 GEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
GE + GH + V + + DG + G +D
Sbjct: 531 GECVRI-FIGHRSMVLSLAMSPDGRYMASGDED 562
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
V + P+ + A+ D + L+D T E ++ IG H+ V ++ SPDG+ + S
Sbjct: 505 VDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG---HRSMVLSLAMSPDGRYMASGDE 561
Query: 276 DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDK 446
D T +WD+ T + T MG+ +S +G L S S + DV + K
Sbjct: 562 DGTIMMWDLSTARCITPL-MGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 55.6 bits (128), Expect = 3e-08
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSP----AHKGGVYGISWSP-DGKQLLS 266
+SP+G A G D ++ +T++ G + H+G V + P + L++
Sbjct: 53 FSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 112
Query: 267 CSGDKTCAIWDIETMQRTTL----FNMGNAVENQQVSCLWQGKH-LISVSLSGVINYLDV 431
SGD+TC +WD+ T +T++ F G+ + VS + IS S D
Sbjct: 113 SSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDT 172
Query: 432 DNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQV 611
+ R GH + + +G T S DG +++ +G V Q HG+
Sbjct: 173 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVY-QPHGDGE 231
Query: 612 NGMRTT 629
NG T+
Sbjct: 232 NGPVTS 237
Score = 39.5 bits (88), Expect = 0.002
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 13/200 (6%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG-DK 281
++P+ + SA DG++ +++ TS+ I P V ++SP+G Q ++C G D
Sbjct: 11 WTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPC--AWVMTCAFSPNG-QSVACGGLDS 67
Query: 282 TCAIWDIE-TMQRTTLFNMGNAVENQQ--VSCLW----QGKHLISVSLSGVINYLDVDNP 440
C+I+ + T + + + + VSC + HLI+ S DV
Sbjct: 68 VCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Query: 441 DKPK----RVLMGHNKPITCLALHGNGKTVY-TASHDGCVTEWNVDSGEARHVEGQGHGN 605
K GH + +++ G+ + + S D W+ + GH
Sbjct: 128 LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEG 187
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
VN ++ DG G DD
Sbjct: 188 DVNTVKFFPDGYRFGTGSDD 207
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNA--------VENQQVSCLWQ 377
VY + W+P+ +++S S D +W+ T Q+T + A Q V+C
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVAC--- 62
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKT-VYTASHDGCVTEW 554
G S+ + + D D R+L GH ++C N + T+S D W
Sbjct: 63 GGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILW 122
Query: 555 NVDSGEARHVEG 590
+V +G V G
Sbjct: 123 DVTTGLKTSVFG 134
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSP---AHKGGVYGISWSPD 248
H V++ PDG F + DG LYD T + ++ P G V I++S
Sbjct: 185 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 243
Query: 249 GKQLLS-CSGDKTCAIWDIETMQRTTLFNMGNAVEN--QQVSCL 371
G+ L + + + TC +WD T+ + ++G ++ ++SCL
Sbjct: 244 GRLLFAGYASNNTCYVWD--TLLGEVVLDLGLQQDSHRNRISCL 285
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 96 AVRYSPDGSL-FASAGFDGKIFLYDGATSELKGEIG--SPAHKGGVYGISWSPDGKQLLS 266
++ +S G L FA + +++D E+ ++G +H+ + + S DG L +
Sbjct: 237 SIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCT 296
Query: 267 CSGDKTCAIW 296
S D IW
Sbjct: 297 GSWDSNLKIW 306
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATS-ELKGEIGSPAHKGGVYGISWSPDGK 254
H+ F + V S DG S +DG++ L+D A + +G H V +++S D +
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG---HTKDVLSVAFSLDNR 118
Query: 255 QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH-----LISVSLSGVIN 419
Q++S S D+T +W+ + T+ + G VSC+ + ++S S +
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTI-SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
++ N K + L GH ++ +A+ +G + DG V W++ G+
Sbjct: 178 VWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T+ V+ K + T HT + V SPDGSL AS G DG + L+D A + ++
Sbjct: 173 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK---KL 229
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
S ++ + +SP+ + L + + IWD+E+
Sbjct: 230 YSLEANSVIHALCFSPN-RYWLCAATEHGIKIWDLES 265
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Frame = +3
Query: 69 KQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPD 248
++ H+R + + DG+L AS G D ++D T + + H V+ +++SP+
Sbjct: 377 QEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG--RSILVFQGHIKPVFSVNFSPN 434
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQ-GKHLISVSLSGVINYL 425
G L S D C IWD+ M+++ +A QV Q G L + S +N
Sbjct: 435 GYHLASGGEDNQCRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ K L GH + L + + + T SHD + W
Sbjct: 494 SGRDFSLVKS-LAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 46.4 bits (105), Expect = 2e-05
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGAT-SELKGEIGSPAHKGGVYGISWS 242
T + H V + P G + +D L+D T +EL + G H VYGI++
Sbjct: 334 TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEG---HSRSVYGIAFQ 390
Query: 243 PDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINY 422
DG SC D +WD+ T R+ L G+ V+ G HL S
Sbjct: 391 QDGALAASCGLDSLARVWDLRT-GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRI 449
Query: 423 LDVDNPDKPKRVLMGHNKPITCLALH-GNGKTVYTASHDGCVTEWN-VDSGEARHVEGQG 596
D+ K ++ H ++ + G + TAS+D V W+ D + + G
Sbjct: 450 WDL-RMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSL--AG 506
Query: 597 HGNQVNGMRTTKDGS-LLTIGIDDTL 671
H ++V + T D S + T+ D T+
Sbjct: 507 HESKVASLDITADSSCIATVSHDRTI 532
Score = 37.1 bits (82), Expect = 0.011
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 1/188 (0%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDGKQLLSCSGDK 281
+S DG + A+ G L++ ++ I HK + +SP L + S D+
Sbjct: 263 FSRDGKILATCSLSGVTKLWE--MPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADR 320
Query: 282 TCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVL 461
T +W + T G+ +V+ GK+L + S D+ N +
Sbjct: 321 TAKLWKTDGTLLQTF--EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQ 377
Query: 462 MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGS 641
GH++ + +A +G + D W++ +G + V QGH V + + +G
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV-FQGHIKPVFSVNFSPNGY 436
Query: 642 LLTIGIDD 665
L G +D
Sbjct: 437 HLASGGED 444
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 54.8 bits (126), Expect = 5e-08
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + HTR +R++PDG S G D + ++D +L E S H+G + + + P
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS--HEGKIQSLDFHP 288
Query: 246 DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
L + S DKT WD+ET + L G E V CL SV L G+ L
Sbjct: 289 HEFLLATGSADKTVKFWDLETFE---LIGSG-GTETTGVRCLTFNPDGKSV-LCGLQESL 343
Query: 426 DVDNPDKPKRVLMGHN---KPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQG 596
+ + + P R G + ++ + +H GK + + + CV W VD + G
Sbjct: 344 KIFSWE-PIRCHDGVDVGWSNLSDMNVH-EGKLLGCSYNQNCVGVWVVDLSRTEPMSGGA 401
Query: 597 HGNQVNGMRTTKDG 638
+ + +T+ G
Sbjct: 402 TQSNSHPEKTSGSG 415
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 54.0 bits (124), Expect = 9e-08
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + +S DG L AS G DG + ++D ++ LK + P G+ + W P G
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG--AGIEWVRWHPRGHI 169
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSC---LWQGKHLISVSLSGVINYLD 428
+L +G + C++W + + NM + N V+C GK + + S L
Sbjct: 170 VL--AGSEDCSLW-MWNADKEAYLNMFSG-HNLNVTCGDFTPDGKLICTGSDDA---SLI 222
Query: 429 VDNPD--KPKRVLMG---HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
V NP + ++ G H + +TCL ++ N + S DG V N+ +G+
Sbjct: 223 VWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGK 275
Score = 53.6 bits (123), Expect = 1e-07
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Frame = +3
Query: 96 AVRYSP-DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCS 272
A+ SP D +L A+ G D K FL+ + E+ P HK V +++S DG+ L S
Sbjct: 75 ALACSPTDATLVATGGGDDKAFLWKIGNGDWAAEL--PGHKDSVSCLAFSYDGQLLASGG 132
Query: 273 GDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKP 449
D I+D + + L G +E + W + I ++ S + L + N DK
Sbjct: 133 LDGVVQIFDASSGTLKCVLDGPGAGIEWVR----WHPRGHIVLAGSEDCS-LWMWNADKE 187
Query: 450 KRVLM--GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGM 620
+ M GHN +TC +GK + T S D + WN + E+ H+ +GH G+
Sbjct: 188 AYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIV-KGHPYHTEGL 245
Score = 50.0 bits (114), Expect = 1e-06
Identities = 48/156 (30%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSG-DKTCAIWDIETMQRTTLFNMGNAVENQQVSCL---WQ 377
HKG +Y ++ SP L++ G D +W I G+ VSCL +
Sbjct: 69 HKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-GH---KDSVSCLAFSYD 124
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
G+ L S L GV+ D + K VL G I + H G V S D + WN
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTL-KCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN 183
Query: 558 VDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
D EA GH V T DG L+ G DD
Sbjct: 184 ADK-EAYLNMFSGHNLNVTCGDFTPDGKLICTGSDD 218
Score = 35.5 bits (78), Expect = 0.032
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 RDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGS---LFASAGFDGKIFLYDGATSEL 185
+D ++ + K + HT + V++SP + L A+ G D K+ ++D S
Sbjct: 262 KDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTP 321
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ H+ GV ++W K L + + T +IWD
Sbjct: 322 RFIC---EHEEGVTSLTWIGTSKYLATGCANGTVSIWD 356
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Frame = +3
Query: 54 KFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATS--ELKGEIGSPAHKGGVY 227
K K T +EHT +R+SP A++ FD + ++D L+ +G H V
Sbjct: 684 KPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMG---HSSMVT 740
Query: 228 GISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSL 404
+ + P L+ SC D W I T ++ G+ Q GK+L + S
Sbjct: 741 SLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQPRV---GKYL-AASS 796
Query: 405 SGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
+ ++N LDV+ + L GH PI + +G + + S D V W + +G
Sbjct: 797 ANLVNVLDVET-QAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTG 849
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Frame = +3
Query: 237 WSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
+S DGK L S DK +W +TM+ +TTL + + + S L + S
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSP--SQLRLATSSFDKT 716
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASHDGCVTEWNVDSGEARHV 584
+ D DN R MGH+ +T L H + + +D + W++++G V
Sbjct: 717 VRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRV 774
Score = 46.4 bits (105), Expect = 2e-05
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 1/188 (0%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKT 284
+S DG + ASAG D K L+ T +K + H + I +SP +L + S DKT
Sbjct: 659 FSSDGKMLASAGHDKKAVLW--YTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKT 716
Query: 285 CAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLI-SVSLSGVINYLDVDNPDKPKRVL 461
+WD + + MG++ + LI S I Y ++N RV
Sbjct: 717 VRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINN-GSCTRVY 775
Query: 462 MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGS 641
G + I G AS V +V++ RH QGH N +N + G
Sbjct: 776 KGGSTQIRFQPRVGK---YLAASSANLVNVLDVETQAIRH-SLQGHANPINSVCWDPSGD 831
Query: 642 LLTIGIDD 665
L +D
Sbjct: 832 FLASVSED 839
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +3
Query: 75 EHTRFAQAVRY---SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
+H RF V + SPDG L A G + + + D T + + H + +W P
Sbjct: 272 KHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSG--HLDFSFASAWHP 329
Query: 246 DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
DG + + DKTC +WDI + ++ GN + + GK++ + ++
Sbjct: 330 DGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVY 389
Query: 426 DVDN 437
DV N
Sbjct: 390 DVSN 393
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 93 QAVRYSPDGSLFASAGFDGKIFLYDGATS-ELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
+++RY+ DG A A + +YD + E + EI G + GIS+SPD + L
Sbjct: 366 RSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEID---FFGEISGISFSPDTEALFIG 422
Query: 270 SGDKT 284
D+T
Sbjct: 423 VWDRT 427
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.8 bits (121), Expect = 2e-07
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Frame = +3
Query: 21 NTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG 200
+ I + + K T + + A+ SPD L SAG +I ++D T LK
Sbjct: 40 DVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET--LKCIRS 97
Query: 201 SPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG 380
H+G V G++ G L + D+ +WD++ T F V + +
Sbjct: 98 WKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSN 157
Query: 381 KH-LISVSLSGVINYLDVDNPDKPKR---VLMGHNKPITCLALHGNGKTVYTASHDGCVT 548
K+ LIS S + D++ + K+ ++ H +T +AL +G T+++A D V
Sbjct: 158 KNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVN 217
Query: 549 EWNV 560
W++
Sbjct: 218 LWDL 221
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 6/191 (3%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
S DGS A A D I + D S +K I + + ++ SPD K L S +
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDT--LTALALSPDDKLLFSAGHSRQI 84
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMG 467
+WD+ET++ + G+ ++C G L + + DVD G
Sbjct: 85 RVWDLETLKCIRSWK-GHEGPVMGMACHASGGLLATAGADRKVLVWDVDG-GFCTHYFRG 142
Query: 468 HNKPITCLALH--GNGKTVYTASHDGCVTEWNVDSGEARH---VEGQGHGNQVNGMRTTK 632
H ++ + H N + + S D V W++++ + H + V + ++
Sbjct: 143 HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSE 202
Query: 633 DG-SLLTIGID 662
DG +L + G D
Sbjct: 203 DGLTLFSAGRD 213
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = +3
Query: 240 SPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVIN 419
S DG + GD + ++ ++T+ + + +S K L S S I
Sbjct: 28 SSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSP--DDKLLFSAGHSRQIR 85
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGH 599
D++ K R GH P+ +A H +G + TA D V W+VD G H +GH
Sbjct: 86 VWDLETL-KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHY-FRGH 143
Query: 600 GNQVNGMRTTKDG--SLLTIGIDD 665
V+ + D ++L G DD
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDD 167
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T +++ P T + H R +V +S +A D + ++ A S+
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW--AISDGSCLK 577
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
H V S+ DG Q +SC D +W++ T +
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMR 623
K + V+ H+K I +A+ N V T S D + W + V +GH ++ +
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD-LVHVVTLKGHKRRIFSVE 548
Query: 624 -TTKDGSLLTIGIDDTL 671
+T D ++T D T+
Sbjct: 549 FSTVDQCVMTASGDKTV 565
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 45 PPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL----KGEIGSPAH 212
P ++ + H +R+SP G L AS G++F++ SE K H
Sbjct: 52 PSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFH 111
Query: 213 KGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
+ V + WSPD L+S S D +C IWD+
Sbjct: 112 RKDVLDLQWSPDDAYLISGSVDNSCIIWDV 141
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + +++SPD + S D ++D + + + H V G++W P K
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHY--VQGVAWDPLAKY 168
Query: 258 LLSCSGDKTCAIW 296
+ S S D+TC I+
Sbjct: 169 VASLSSDRTCRIY 181
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +3
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEWNVDSGEAR----HVEGQG----HGNQVNGMRTT 629
KP+ + H + TA D + W ++SG+A V Q HG VN +R +
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 630 KDGSLLTIGID 662
G LL G D
Sbjct: 74 PSGELLASGAD 84
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 45 PPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL----KGEIGSPAH 212
P ++ + H +R+SP G L AS G++F++ SE K H
Sbjct: 52 PSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFH 111
Query: 213 KGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
+ V + WSPD L+S S D +C IWD+
Sbjct: 112 RKDVLDLQWSPDDAYLISGSVDNSCIIWDV 141
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + +++SPD + S D ++D + + + H V G++W P K
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHY--VQGVAWDPLAKY 168
Query: 258 LLSCSGDKTCAIW 296
+ S S D+TC I+
Sbjct: 169 VASLSSDRTCRIY 181
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +3
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEWNVDSGEAR----HVEGQG----HGNQVNGMRTT 629
KP+ + H + TA D + W ++SG+A V Q HG VN +R +
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 630 KDGSLLTIGID 662
G LL G D
Sbjct: 74 PSGELLASGAD 84
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 52.0 bits (119), Expect = 3e-07
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Frame = +3
Query: 117 GSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
G+LF + G D + ++D + L K GS G + ++ + D K +++ + +
Sbjct: 244 GTLF-TGGQDRAVKMWDTNSGTLIKSLYGS---LGNILDMAVTHDNKSVIAATSSNNLFV 299
Query: 294 WDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGH 470
WD+ + + R TL + V VS + +H++S + I D+ VL
Sbjct: 300 WDVSSGRVRHTLTGHTDKVCAVDVS-KFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS 358
Query: 471 NKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGS-LL 647
N CL++ +G TV++ DG + W++ +G+ E GH + V + +++G+ +L
Sbjct: 359 NCNAICLSI--DGLTVFSGHMDGNLRLWDIQTGKLLS-EVAGHSSAVTSVSLSRNGNRIL 415
Query: 648 TIGIDD 665
T G D+
Sbjct: 416 TSGRDN 421
Score = 51.6 bits (118), Expect = 5e-07
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +3
Query: 81 TRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQL 260
T A+ S DG S DG + L+D T +L E+ H V +S S +G ++
Sbjct: 357 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVA--GHSSAVTSVSLSRNGNRI 414
Query: 261 LSCSGDKTCAIWDIETMQRT-TLFNMGNAV-ENQQVSCLWQGKHLISV-SLSGVINYLDV 431
L+ D ++D T++ TL GN + N SC+ ++ S G ++ +
Sbjct: 415 LTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSL 474
Query: 432 DNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ +L PI C + G GK + +A +G V W
Sbjct: 475 SKGNIVS-ILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/124 (20%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE--TMQRTTLFNMGNAVENQQVSCLWQG 380
AH+GG I + + L + D+ +WD T+ ++ ++GN ++ ++
Sbjct: 229 AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILD---MAVTHDN 285
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASHDGCVTEWN 557
K +I+ + S + DV + + + L GH + + + + + V +A++D + W+
Sbjct: 286 KSVIAATSSNNLFVWDVSS-GRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Query: 558 VDSG 569
+ G
Sbjct: 345 LHKG 348
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
D +A +F++D ++ ++ + K +S + ++S + D+T +
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVS-KFSSRHVVSAAYDRTIKL 342
Query: 294 WDIET--MQRTTLFNMGNAVENQQVSCLW-QGKHLISVSLSGVINYLDVDNPDKPKRVLM 464
WD+ T LF N CL G + S + G + D+ K +
Sbjct: 343 WDLHKGYCTNTVLFT-----SNCNAICLSIDGLTVFSGHMDGNLRLWDIQT-GKLLSEVA 396
Query: 465 GHNKPITCLALHGNGKTVYTASHD 536
GH+ +T ++L NG + T+ D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRD 420
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
SPDG L G + + L D T + + H + +W PDG + + DKTC
Sbjct: 284 SPDGKLLTIVGDNPESLLVDPNTGKTLATLSG--HLDFSFASAWHPDGFTFSTGNQDKTC 341
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
+WDI + ++ GN + + GK++ + ++ DV N
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSN 391
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 93 QAVRYSPDGSLFASAGFDGKIFLYDGATS-ELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
+++RY+ DG A A + +YD + E + EI G + GIS+SPD + L
Sbjct: 364 RSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEID---FFGEISGISFSPDTEALFIG 420
Query: 270 SGDKT 284
D+T
Sbjct: 421 VWDRT 425
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 51.2 bits (117), Expect = 6e-07
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 1/214 (0%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D TI +++ K T H + + S + SAG D ++ +D + K
Sbjct: 197 DRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD--LEQNKVIR 254
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLW 374
H GVY ++ P LL+ D C +WDI T MQ L N V V
Sbjct: 255 SYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTV--CSVFTRP 312
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+++ S I + D+ K L H K + + LH +AS D ++
Sbjct: 313 TDPQVVTGSHDTTIKFWDL-RYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN-TKKF 370
Query: 555 NVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
++ GE H +N M +DG ++T G
Sbjct: 371 SLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG 404
Score = 45.6 bits (103), Expect = 3e-05
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLWQGKH 386
H G V +++ P + + S D+T IWD+ T + + TL V VS + +
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSN--RHTY 232
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ S + D++ +K R GH + CLALH + T D W++ +
Sbjct: 233 MFSAGDDKQVKCWDLEQ-NKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 567 GEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDDT 668
+ + GH N V + T + G DT
Sbjct: 292 -KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDT 324
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGAT------SELKGEIGSPAHKGGVYGISWSPDGKQ 257
A+ + DG + + G +G I+ +D + SE + GS + G+Y + G +
Sbjct: 391 AMAVNEDG-VMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSR 449
Query: 258 LLSCSGDKTCAIW 296
L++C DKT +W
Sbjct: 450 LVTCEADKTIKMW 462
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNG 617
P K RV+ GH + +A + + T S D + W+V +G + + GH QV G
Sbjct: 165 PWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLK-LTLTGHIEQVRG 223
Query: 618 MRTTKDGSLLTIGIDD 665
+ + + + DD
Sbjct: 224 LAVSNRHTYMFSAGDD 239
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 50.8 bits (116), Expect = 8e-07
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
Frame = +3
Query: 90 AQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPA------HKGGVYGISWSPDG 251
A+ R+SPDG AS+ DG I ++D + +LK ++ A H V I +S D
Sbjct: 216 AECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDS 275
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDV 431
+ L S S D IW I T F+ ++ +S G L+S S +
Sbjct: 276 EMLASGSQDGKIKIWRIRTGVCIRRFD-AHSQGVTSLSFSRDGSQLLSTSFDQTARIHGL 334
Query: 432 DNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
+ K + GH + +G + TAS D V W+
Sbjct: 335 KS-GKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 35.5 bits (78), Expect = 0.032
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H++ ++ +S DGS S FD ++ + +L E H V ++ DG +
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRG--HTSYVNHAIFTSDGSR 361
Query: 258 LLSCSGDKTCAIWDIET 308
+++ S D T +WD +T
Sbjct: 362 IITASSDCTVKVWDSKT 378
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 462 MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGS 641
M H+ P+ C+ + + + + S DG + W + +G H V + ++DGS
Sbjct: 260 MMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIR-RFDAHSQGVTSLSFSRDGS 318
Query: 642 -LLTIGIDDT 668
LL+ D T
Sbjct: 319 QLLSTSFDQT 328
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Frame = +3
Query: 96 AVRYSPD--GSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGG--VYGISWSPDGKQLL 263
++++ PD G + S +DG + YD E + + GG ++ + ++ L+
Sbjct: 126 SLKWRPDFSGRVIGSGDYDGVVTEYD---VEKQVPVSERDEHGGRRIWSVDYTLYNGSLI 182
Query: 264 SCSG--DKTCAIWDIE---TMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL- 425
SG D T +WD T++ T G A+ + + G I+V + Y+
Sbjct: 183 GASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPF--GGSSIAVGCADRNAYVY 240
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN 605
D+ P VL GH K +T A + T+ T S DG + +W++D+G +GH N
Sbjct: 241 DIRRLVDPLIVLDGHTKTVT-YARFMDSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVN 299
Query: 606 QVN--GMRTTKDGSLLTIGIDD 665
N G+ + G L+ G ++
Sbjct: 300 SRNFVGLSVWRHGGLVVSGSEN 321
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + HTR +R++PDG S G D + ++D +L E S H+G + + + P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS--HEGQIQSLDFHP 195
Query: 246 DGKQLLSCSGDKTCAIWDIETMQ 314
L + S D+T WD+ET +
Sbjct: 196 HEFLLATGSADRTVKFWDLETFE 218
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Frame = +3
Query: 24 TIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGS 203
TI +++ K T H +V + P G FAS D + ++D KG I +
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD---IRKKGCIHT 138
Query: 204 -PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG 380
H GV + ++PDG+ ++S D +WD+ + T F + + Q +
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQIQSLDFHPHE 197
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKP----ITCLALHGNGKTV 518
L + S + + D++ + L+G P + CL+ + +GKTV
Sbjct: 198 FLLATGSADRTVKFWDLETFE-----LIGSGGPETAGVRCLSFNPDGKTV 242
Score = 32.7 bits (71), Expect = 0.23
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 2/183 (1%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
+ + G D K+ L+ A + + H G+ +++ + + + T +WD+
Sbjct: 31 VLVTGGEDHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 303 ETMQ--RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNK 476
E + RT + N + V G+ S SL + D+ GH +
Sbjct: 89 EEAKIVRTLTGHRSNCIS---VDFHPFGEFFASGSLDTNLKIWDIRKKGCI-HTYKGHTR 144
Query: 477 PITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ L +G+ V + D V W++ +G+ E + H Q+ + LL G
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 657 IDD 665
D
Sbjct: 204 SAD 206
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + HTR +R++PDG S G D + ++D +L E S H+G + + + P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS--HEGQIQSLDFHP 195
Query: 246 DGKQLLSCSGDKTCAIWDIETMQ 314
L + S D+T WD+ET +
Sbjct: 196 HEFLLATGSADRTVKFWDLETFE 218
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Frame = +3
Query: 24 TIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGS 203
TI +++ K T H +V + P G FAS D + ++D KG I +
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD---IRKKGCIHT 138
Query: 204 -PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG 380
H GV + ++PDG+ ++S D +WD+ + T F + + Q +
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQIQSLDFHPHE 197
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKP----ITCLALHGNGKTV 518
L + S + + D++ + L+G P + CL+ + +GKTV
Sbjct: 198 FLLATGSADRTVKFWDLETFE-----LIGSGGPETAGVRCLSFNPDGKTV 242
Score = 32.7 bits (71), Expect = 0.23
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 2/183 (1%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
+ + G D K+ L+ A + + H G+ +++ + + + T +WD+
Sbjct: 31 VLVTGGEDHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 303 ETMQ--RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNK 476
E + RT + N + V G+ S SL + D+ GH +
Sbjct: 89 EEAKIVRTLTGHRSNCIS---VDFHPFGEFFASGSLDTNLKIWDIRKKGCI-HTYKGHTR 144
Query: 477 PITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ L +G+ V + D V W++ +G+ E + H Q+ + LL G
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 657 IDD 665
D
Sbjct: 204 SAD 206
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/138 (21%), Positives = 59/138 (42%)
Frame = +3
Query: 144 DGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTT 323
D ++L+D +T + KG V I+W+PDG+ + + +WD + ++
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 324 LFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG 503
G+ +++ S W L + + G+I DV GH + + L G
Sbjct: 219 TLKGGH--QSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 276
Query: 504 NGKTVYTASHDGCVTEWN 557
+G+ + + +D V W+
Sbjct: 277 SGQQLASGGNDNVVHIWD 294
Score = 44.0 bits (99), Expect = 9e-05
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 10/175 (5%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG----SPAHKGGVYGI 233
T + HT+ +++S G AS G D + ++D + + H V +
Sbjct: 261 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 320
Query: 234 SWSPDGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSL 404
+W P LL+ G D+T W+ T + G+ V S LW +S
Sbjct: 321 AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV----CSLLWSKNERELLSS 376
Query: 405 SGVI-NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
G N L + P K L GH + +A +G TV +A+ D + WNV
Sbjct: 377 HGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/138 (21%), Positives = 59/138 (42%)
Frame = +3
Query: 144 DGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTT 323
D ++L+D +T + KG V I+W+PDG+ + + +WD + ++
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 324 LFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG 503
G+ +++ S W L + + G+I DV GH + + L G
Sbjct: 209 TLKGGH--QSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 266
Query: 504 NGKTVYTASHDGCVTEWN 557
+G+ + + +D V W+
Sbjct: 267 SGQQLASGGNDNVVHIWD 284
Score = 44.0 bits (99), Expect = 9e-05
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 10/175 (5%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG----SPAHKGGVYGI 233
T + HT+ +++S G AS G D + ++D + + H V +
Sbjct: 251 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 310
Query: 234 SWSPDGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSL 404
+W P LL+ G D+T W+ T + G+ V S LW +S
Sbjct: 311 AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV----CSLLWSKNERELLSS 366
Query: 405 SGVI-NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
G N L + P K L GH + +A +G TV +A+ D + WNV
Sbjct: 367 HGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPD 248
+ HT +++S +G AS+ D +++ A + + H V I WSPD
Sbjct: 271 ESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPD 330
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QGKHLISVSLSGVINY 422
+Q+L+C ++ WD+++ ++ G +SC W G+ +I+ I
Sbjct: 331 DRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGI---SPISCGWYPDGQGIIAGMTDRSICM 387
Query: 423 LDVDNPDKPKRVLMG-HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVE 587
D+D + K G + ++ +A+ +GK + + D ++ ++ ++ R +E
Sbjct: 388 WDLDG--REKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIE 441
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 378 GKHLISVSL--SGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTE 551
GK+L S S + +I + D K L+GH+KP+ + + + V T + +
Sbjct: 286 GKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRR 345
Query: 552 WNVDSGEARHVEGQG 596
W+VDSG+ H+ +G
Sbjct: 346 WDVDSGDCVHMYEKG 360
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIW 296
+ AS D +++++ +T +L E+ P H G V +SWSP +L S S D T IW
Sbjct: 502 AFIASGSEDSQVYIWHRSTGKLIVEL--PGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Query: 297 DIETMQR 317
++ + +
Sbjct: 560 GLDRINQ 566
Score = 28.3 bits (60), Expect = 4.9
Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 4/188 (2%)
Frame = +3
Query: 12 LRDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYD-GATSELK 188
+ D +I +++ + +C K + T+ + + DG S D I L+D AT E
Sbjct: 380 MTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERL 439
Query: 189 GEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSC 368
E + + S S D K +L ++ +W+IE + G+ +
Sbjct: 440 IE-----EEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRS 494
Query: 369 LWQGKHLISVSLSGVINYLDVDNPDKPKRV--LMGHNKPITCLALH-GNGKTVYTASHDG 539
+ G ++ + + + + K + L GH + C++ N + +AS DG
Sbjct: 495 CFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDG 554
Query: 540 CVTEWNVD 563
+ W +D
Sbjct: 555 TIRIWGLD 562
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 50.0 bits (114), Expect = 1e-06
Identities = 47/213 (22%), Positives = 88/213 (41%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D TI +++ K T H + + S + SAG D ++ +D +++
Sbjct: 191 DRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQ 377
H GVY ++ P +L+ D C +WDI T + +F + + + V
Sbjct: 251 HGHLH--GVYCLALHPTLDVVLTGGRDSVCRVWDIRT--KMQIFVLPHDSDVFSVLARPT 306
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
+I+ S I + D+ K + H K + +ALH +AS D + +++
Sbjct: 307 DPQVITGSHDSTIKFWDL-RYGKSMATITNHKKTVRAMALHPKENDFVSASADN-IKKFS 364
Query: 558 VDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ GE H + +N + +DG ++T G
Sbjct: 365 LPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGG 397
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLWQGKH 386
H G V +++ P + + S D+T IWD+ T + + TL V VS + +
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSN--RHTY 226
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+ S + D++ +K R GH + CLALH V T D W++
Sbjct: 227 MFSAGDDKQVKCWDLEQ-NKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGAT------SELKGEIGSPAHKGGVYGISWSPDGKQ 257
AV + DG + + G G ++ +D + +E + GS + G+Y + G +
Sbjct: 384 AVAVNEDG-VMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSR 442
Query: 258 LLSCSGDKTCAIW 296
L++C GDKT +W
Sbjct: 443 LVTCEGDKTIKMW 455
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNG 617
P K RVL GH + +A + + T S D + W+V +G + + GH QV G
Sbjct: 159 PWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLK-LTLTGHIGQVRG 217
Query: 618 MRTTKDGSLLTIGIDD 665
+ + + + DD
Sbjct: 218 LAVSNRHTYMFSAGDD 233
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 50.0 bits (114), Expect = 1e-06
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDGKQL--LSC 269
V +SPDGSLF A + LY E ++ + AH GGV IS+S KQL ++C
Sbjct: 423 VIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITC 482
Query: 270 SGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG--KHLISVSLSGVINYLDVDNPD 443
DKT +WD T + F G+ V ++ + + S +L G I DN
Sbjct: 483 GDDKTIKVWDAATGVKRHTFE-GHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMG 541
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
+ + T +A +G +++ S DG + EWN G +
Sbjct: 542 S-RVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVK 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 441 DKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
D+ K L GH+K IT LA + ++ D + WN D E
Sbjct: 909 DEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 952
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 50.0 bits (114), Expect = 1e-06
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDGKQL--LSC 269
V +SPDGSLF A + LY E ++ + AH GGV IS+S KQL ++C
Sbjct: 423 VIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITC 482
Query: 270 SGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG--KHLISVSLSGVINYLDVDNPD 443
DKT +WD T + F G+ V ++ + + S +L G I DN
Sbjct: 483 GDDKTIKVWDAATGVKRHTFE-GHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMG 541
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
+ + T +A +G +++ S DG + EWN G +
Sbjct: 542 S-RVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVK 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 441 DKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
D+ K L GH+K IT LA + ++ D + WN D E
Sbjct: 909 DEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 952
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +3
Query: 48 PFKFKCTKQEHTRFAQAVRYSPDG-SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGV 224
P + + HT+ A+ +S L ASAG DG +++++ +++ K H V
Sbjct: 149 PSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPV 208
Query: 225 YGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAV 347
+ WS G LLSC D T ++D+E T F V
Sbjct: 209 KDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVV 249
Score = 36.3 bits (80), Expect = 0.019
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +3
Query: 423 LDVDNPDKPKRVLMGHNKPITCLALH-GNGKTVYTASHDGCVTEWNVDSGEARHVEGQGH 599
L + P + L GH K +T + + + +A DG V WNV S + + V H
Sbjct: 144 LQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLH 203
Query: 600 GN-QVNGMRTTKDG-SLLTIGIDDT 668
N V ++ +K G SLL+ G D T
Sbjct: 204 HNAPVKDVKWSKQGLSLLSCGYDCT 228
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 21 NTIAVFE-GPPFKFKCTK--QEH--TRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
N A+F PPFK K + H F +SPDG AS DG +++YD ++ L
Sbjct: 361 NYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTAL 420
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 49.2 bits (112), Expect = 2e-06
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 5/196 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSP---DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPD 248
H+R V YSP DG SA D L +G T + G HKG V+ S +
Sbjct: 10 HSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTF--EGHKGAVWSCSLDKN 67
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH-LISVSLSGVINYL 425
+ S S D T IW+ T F + V + + H L++ + ++
Sbjct: 68 AIRAASASADFTAKIWNALTGDELHSFEHKHIV---RACAFSEDTHRLLTGGMEKILRIF 124
Query: 426 DVDNPD-KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHG 602
D++ PD PK V T LH + + + + G + W++ S + H
Sbjct: 125 DLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHT--LETK 182
Query: 603 NQVNGMRTTKDGSLLT 650
+ V ++DG +T
Sbjct: 183 SPVTSAEVSQDGRYIT 198
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 117 GSLFASAGFDGKIFLYDGATSELKGEIG-SPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
G+ F + G D + +D T E EIG + H G V+ + ++P G+ S S D T I
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGE---EIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRI 291
Query: 294 WDIETMQRTTLFNMGNAVE 350
W + ++ N+ V+
Sbjct: 292 WVVGSVNHPEESNLSGHVK 310
Score = 32.3 bits (70), Expect = 0.30
Identities = 34/158 (21%), Positives = 62/158 (39%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
D ++ +S G I L+D + ++ + + K V S DG+ + + G
Sbjct: 152 DNTILSSCTDTGDIRLWDIRSDKIVHTLET---KSPVTSAEVSQDGRYITTADGSSV-KF 207
Query: 294 WDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHN 473
WD + ++M VE+ + G I+ ++ D ++ GH+
Sbjct: 208 WDAKNFGLLKSYDMPCNVESASLEPK-HGNTFIAGGEDMWVHRFDFQTGEEIG-CNKGHH 265
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVE 587
P+ C+ G++ + S DG V W V G H E
Sbjct: 266 GPVHCVRYAPGGESYTSGSEDGTVRIWVV--GSVNHPE 301
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 48.8 bits (111), Expect = 3e-06
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 5/175 (2%)
Frame = +3
Query: 93 QAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCS 272
++V + P SL S G D + L+D T + HK V + W+ +G LL+ S
Sbjct: 272 KSVDWHPTKSLLVSGGKDQLVKLWD--TRSGRELCSLHGHKNIVLSVKWNQNGNWLLTAS 329
Query: 273 GDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH---LISVSLSGVINYLDVDNPD 443
D+ ++DI TM+ F G+ S W H +S S G I + V + +
Sbjct: 330 KDQIIKLYDIRTMKELQSFR-GHT--KDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHEN 386
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW--NVDSGEARHVEGQGHG 602
+ H+ + LA H G + + S+D W N + R V Q G
Sbjct: 387 PQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRDVLMQNQG 441
Score = 44.8 bits (101), Expect = 5e-05
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 3/155 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QGK 383
H V + W P L+S D+ +WD T L ++ + +N +S W G
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWD--TRSGRELCSL-HGHKNIVLSVKWNQNGN 323
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVY-TASHDGCVTEWNV 560
L++ S +I D+ K + GH K +T LA H + + + S DG + W V
Sbjct: 324 WLLTASKDQIIKLYDI-RTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIV 382
Query: 561 DSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
+ H N V + G LL G +D
Sbjct: 383 GHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSND 417
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +3
Query: 33 VFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAH 212
++ G F F+ Q H + +++ +S + + S G + + + +K AH
Sbjct: 149 LWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKAN--KTAH 206
Query: 213 KGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
K + +S+ + SCS D T +WD
Sbjct: 207 KESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + HTR + +SPDG S G D + ++D +L E H+G + + + P
Sbjct: 86 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KCHEGPIRSLDFHP 143
Query: 246 DGKQLLSCSGDKTCAIWDIETMQ 314
L + S D+T WD+ET +
Sbjct: 144 LEFLLATGSADRTVKFWDLETFE 166
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVNGMRTTKD 635
L GH P+ +A + V + G + W+++ E++ V GH + + +
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLE--ESKMVRAFTGHRSNCSAVEFHPF 60
Query: 636 GSLLTIGIDDT 668
G L G DT
Sbjct: 61 GEFLASGSSDT 71
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/124 (19%), Positives = 49/124 (39%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V ++++ + +L+ + +WD+E + F G+ V G+ L
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFT-GHRSNCSAVEFHPFGEFL 64
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
S S + D + GH + I+ + +G+ V + D V W++ +G
Sbjct: 65 ASGSSDTNLRVWDTRKKGCIQ-TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
Query: 570 EARH 581
+ H
Sbjct: 124 KLLH 127
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/69 (39%), Positives = 36/69 (52%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
S D + A G +G I L T EL IG+ G V +++S DGK LLS GD
Sbjct: 342 SQDSNTIAFVGNEGYILLVSTKTKEL---IGTLKMNGSVRSLAFSEDGKHLLSSGGDGQV 398
Query: 288 AIWDIETMQ 314
+WD+ TM+
Sbjct: 399 YVWDLRTMK 407
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 48 PFKFKCTKQEHTRFAQAVRYSP-DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGV 224
P + T HT+ A+R+ P G L SAG D K+ ++D S K H V
Sbjct: 271 PKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSG-KCMRTYMGHAKAV 329
Query: 225 YGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMG 338
I +S DG + L+ DK WD ET Q + F+ G
Sbjct: 330 RDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTG 367
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +3
Query: 18 DNTIAVFE-GPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATS-ELKG 191
D ++ V+E G P K + H ++ P+G+ A+ D +I +Y +L
Sbjct: 433 DKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK 492
Query: 192 EIGSPAHKGGVYG--ISWSPDGKQLLSCSGDKTCAIWD 299
+ H Y +++SPDG+ ++S G+ C WD
Sbjct: 493 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 530
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
QG L+S + + DV N K R MGH K + + +G TA +D + W
Sbjct: 294 QGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYW 353
Query: 555 NVDSGE 572
+ ++G+
Sbjct: 354 DTETGQ 359
Score = 33.5 bits (73), Expect = 0.13
Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 2/154 (1%)
Frame = +3
Query: 210 HKGGVYGISWSP-DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
H GV I + P G LLS D IWD+ + MG+A + + G
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSK 340
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTAS-HDGCVTEWNVD 563
++ I Y D + G + L + + + A D + +W+++
Sbjct: 341 FLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDIN 400
Query: 564 SGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
+GE E H VN + + DD
Sbjct: 401 TGEVTQ-EYDQHLGAVNTITFVDNNRRFVTSSDD 433
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 99 VRYSPDG---SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
V+ +PD ++ + D KI +D T E+ E H G V I++ + ++ ++
Sbjct: 373 VKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ--HLGAVNTITFVDNNRRFVTS 430
Query: 270 SGDKTCAIWD 299
S DK+ +W+
Sbjct: 431 SDDKSLRVWE 440
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VRYS GS++ +A DG I L+DG +++ IG+ K V ++ D + +LS D
Sbjct: 180 VRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKD 239
Query: 279 KTCAIWDI 302
T +W+I
Sbjct: 240 STVKLWEI 247
Score = 39.1 bits (87), Expect = 0.003
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 15/217 (6%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYD--GATSELKGEIGSPA-------HKG 218
T EH + R+SPDG FA+ G D I L++ + G+ + H
Sbjct: 26 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 85
Query: 219 GVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVEN-QQVSCLWQGKHLIS 395
+ + + P L+S + D +D F + N + +S G+ L++
Sbjct: 86 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 145
Query: 396 VSLSGVINYLDVDNPD--KPKRVL-MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ + + DV+ P G + I + G TAS DG + ++ S
Sbjct: 146 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 205
Query: 567 GEARHVEGQGHG-NQVNGMRTTKDGS-LLTIGIDDTL 671
+ G HG ++V TKD +L+ G D T+
Sbjct: 206 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 242
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
VRYS GS++ +A DG I L+DG +++ IG+ K V ++ D + +LS D
Sbjct: 272 VRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKD 331
Query: 279 KTCAIWDI 302
T +W+I
Sbjct: 332 STVKLWEI 339
Score = 39.1 bits (87), Expect = 0.003
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 15/217 (6%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYD--GATSELKGEIGSPA-------HKG 218
T EH + R+SPDG FA+ G D I L++ + G+ + H
Sbjct: 118 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAE 177
Query: 219 GVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVEN-QQVSCLWQGKHLIS 395
+ + + P L+S + D +D F + N + +S G+ L++
Sbjct: 178 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLA 237
Query: 396 VSLSGVINYLDVDNPD--KPKRVL-MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ + + DV+ P G + I + G TAS DG + ++ S
Sbjct: 238 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVS 297
Query: 567 GEARHVEGQGHG-NQVNGMRTTKDGS-LLTIGIDDTL 671
+ G HG ++V TKD +L+ G D T+
Sbjct: 298 AKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 334
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 47.6 bits (108), Expect = 8e-06
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 1/189 (0%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
+PDG SA D + L +G T + G HKG V+ + + S S D +
Sbjct: 28 TPDGFFLISASKDSQPMLRNGETGDWIGTF--EGHKGAVWSSCLDNNALRAASASADFSA 85
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMG 467
+WD T F + V S K+LI+ ++ D++ D P +
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFS--QDTKYLITGGFEKILRVFDLNRLDAPPTEIDK 143
Query: 468 HNKPITCLA-LHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSL 644
I L LHG+ + + + G V W+V SG+ V+ + V ++DG
Sbjct: 144 SPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKI--VQTLETKSPVTSAEVSQDGRY 201
Query: 645 LTIGIDDTL 671
+T T+
Sbjct: 202 ITTADGSTV 210
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/147 (19%), Positives = 57/147 (38%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
D ++ +S G + L+D + ++ + + K V S DG+ + + G T
Sbjct: 157 DQTILSSCTDIGGVRLWDVRSGKIVQTLET---KSPVTSAEVSQDGRYITTADGS-TVKF 212
Query: 294 WDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHN 473
WD ++M +E+ + G ++ + D + K GH+
Sbjct: 213 WDANHFGLVKSYDMPCNIESASLEPK-SGNKFVAGGEDMWVRLFDF-HTGKEIGCNKGHH 270
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEW 554
P+ C+ G++ + S DG + W
Sbjct: 271 GPVHCVRFAPTGESYASGSEDGTIRIW 297
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 47.6 bits (108), Expect = 8e-06
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDGKQL--LSC 269
V +SPDGSLF A + LY E ++ + AH GGV I++S KQL +C
Sbjct: 423 VIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTC 482
Query: 270 SGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG--KHLISVSLSGVINYLDVDNPD 443
DKT +WD T + F G+ + ++ + + S +L G I DN
Sbjct: 483 GDDKTIKVWDAATGVKRYTFE-GHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMG 541
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
+ + T +A +G +++ S DG + EWN G +
Sbjct: 542 S-RVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVK 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 441 DKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
D+ K L GH+K IT LA + ++ D + WN D E
Sbjct: 898 DEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 941
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 47.6 bits (108), Expect = 8e-06
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDGKQL--LSC 269
V +SPDGSLF A + LY E ++ + AH GGV I++S KQL +C
Sbjct: 423 VIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTC 482
Query: 270 SGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG--KHLISVSLSGVINYLDVDNPD 443
DKT +WD T + F G+ + ++ + + S +L G I DN
Sbjct: 483 GDDKTIKVWDAATGVKRYTFE-GHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMG 541
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
+ + T +A +G +++ S DG + EWN G +
Sbjct: 542 S-RVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVK 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 441 DKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
D+ K L GH+K IT LA + ++ D + WN D E
Sbjct: 898 DEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 941
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T + H+R +R++PDG S G D + ++D +L E H+G + + + P
Sbjct: 137 TYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KFHEGPIRSLDFHP 194
Query: 246 DGKQLLSCSGDKTCAIWDIETMQ 314
L + S D+T WD+ET +
Sbjct: 195 LEFLLATGSADRTVKFWDLETFE 217
Score = 33.5 bits (73), Expect = 0.13
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Frame = +3
Query: 123 LFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
LF + G D K+ L+ G + L G H V +++ +L+ + +WD
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCG---HTSAVDSVAFDSAEVLVLAGASSGVIKLWD 86
Query: 300 IETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKP 479
+E + F G+ V G+ L S S + D+ + GH++
Sbjct: 87 VEEAKMVRAFT-GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQ-TYKGHSRG 144
Query: 480 ITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
I+ + +G+ V + D V W++ +G+ H
Sbjct: 145 ISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 46.8 bits (106), Expect = 1e-05
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW-- 296
+ A+ G D L+D + ++ + H V + + D +L+ S DKT IW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTL--TGHSKKVTSVKFVGDSDLVLTASADKTVRIWRN 293
Query: 297 --DIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVL-MG 467
D TL + ++ E + V+ K+ +S SL G + D+ + +V
Sbjct: 294 PGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLL 647
N T A H +G + T + V W+V S +A + GH +V + +++G L
Sbjct: 352 KNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS-QANVAKFDGHTGEVTAISFSENGYFL 410
Query: 648 TIGIDD 665
+D
Sbjct: 411 ATAAED 416
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 18 DNTIAVFEGP-PFKFKC--TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELK 188
D T+ ++ P + C T +H+ +AV P F SA DG YD ++
Sbjct: 285 DKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCL 344
Query: 189 GEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSC 368
++ + ++ PDG L + + IWD+++ F+ G+ E +S
Sbjct: 345 AQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFD-GHTGEVTAISF 403
Query: 369 LWQGKHLISVSLSGV 413
G L + + GV
Sbjct: 404 SENGYFLATAAEDGV 418
Score = 34.3 bits (75), Expect = 0.075
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLY--DGATSELKG 191
D T +F+ P + T H++ +V++ D L +A D + ++ G + G
Sbjct: 243 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 302
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSC 368
+ H V ++ P K +S S D T +D+ + + + V+ +
Sbjct: 303 YTLND-HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF 361
Query: 369 LWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVT 548
G L + + V+ DV + + GH +T ++ NG + TA+ DG V
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAK-FDGHTGEVTAISFSENGYFLATAAEDG-VR 419
Query: 549 EWNV 560
W++
Sbjct: 420 LWDL 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 46.8 bits (106), Expect = 1e-05
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW-- 296
+ A+ G D L+D + ++ + H V + + D +L+ S DKT IW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTL--TGHSKKVTSVKFVGDSDLVLTASADKTVRIWRN 293
Query: 297 --DIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVL-MG 467
D TL + ++ E + V+ K+ +S SL G + D+ + +V
Sbjct: 294 PGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDS 351
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLL 647
N T A H +G + T + V W+V S +A + GH +V + +++G L
Sbjct: 352 KNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS-QANVAKFDGHTGEVTAISFSENGYFL 410
Query: 648 TIGIDD 665
+D
Sbjct: 411 ATAAED 416
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 18 DNTIAVFEGP-PFKFKC--TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELK 188
D T+ ++ P + C T +H+ +AV P F SA DG YD ++
Sbjct: 285 DKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCL 344
Query: 189 GEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSC 368
++ + ++ PDG L + + IWD+++ F+ G+ E +S
Sbjct: 345 AQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFD-GHTGEVTAISF 403
Query: 369 LWQGKHLISVSLSGV 413
G L + + GV
Sbjct: 404 SENGYFLATAAEDGV 418
Score = 34.3 bits (75), Expect = 0.075
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLY--DGATSELKG 191
D T +F+ P + T H++ +V++ D L +A D + ++ G + G
Sbjct: 243 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 302
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ-RTTLFNMGNAVENQQVSC 368
+ H V ++ P K +S S D T +D+ + + + V+ +
Sbjct: 303 YTLND-HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF 361
Query: 369 LWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVT 548
G L + + V+ DV + + GH +T ++ NG + TA+ DG V
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAK-FDGHTGEVTAISFSENGYFLATAAEDG-VR 419
Query: 549 EWNV 560
W++
Sbjct: 420 LWDL 423
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
+T R+SPDG A G + +YD T E + H + ++W+P+GK
Sbjct: 194 NTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGD-HLEAICYLTWAPNGKY 252
Query: 258 LLSCSGDKTCAIWDIETMQ 314
+ + DK +WD++ Q
Sbjct: 253 IATSGLDKQVLLWDVDKKQ 271
Score = 43.6 bits (98), Expect = 1e-04
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFL---YDGATSE-L 185
D+ + +++ P +F+ T + + ++ GSL A+AG D I L +DG+ L
Sbjct: 83 DHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVL 142
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET-MQRTTLFNMG-NAVENQQ 359
KG HKG V G+ + P+G+ L S T W+++ + TL + + N
Sbjct: 143 KG------HKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTS 196
Query: 360 VSCL--W--QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTA 527
+ + W G+ L L + D +K + H + I L NGK + T+
Sbjct: 197 IVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATS 256
Query: 528 SHDGCVTEWNVD 563
D V W+VD
Sbjct: 257 GLDKQVLLWDVD 268
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
RVL GH P+T L H NG+ + + G V W + +G
Sbjct: 140 RVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNG 178
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/82 (20%), Positives = 36/82 (43%)
Frame = +3
Query: 54 KFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGI 233
K + +H + ++P+G A++G D ++ L+D + K +I + + +
Sbjct: 229 KLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWD---VDKKQDIDRHKFEERICCM 285
Query: 234 SWSPDGKQLLSCSGDKTCAIWD 299
SW P+G L +W+
Sbjct: 286 SWKPNGNALSVIDAKGRYGVWE 307
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +3
Query: 363 SCLWQGK--HLISVSLSGV-INYLD-VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTAS 530
S LW K H ++ S S I+ D + P +L H +T LAL + + + S
Sbjct: 22 SILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGS 81
Query: 531 HDGCVTEWNVDSGE 572
D CV + SGE
Sbjct: 82 IDHCVKLYKFPSGE 95
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/116 (23%), Positives = 48/116 (41%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
SPDG L A G D L D + + G + H + +W P+G + + DKTC
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTL--KGHLDYSFASAWHPNGVTFATGNQDKTC 343
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKR 455
IWD + + GN + + G+++ + ++ D + K ++
Sbjct: 344 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 399
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/116 (23%), Positives = 48/116 (41%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
SPDG L A G D L D + + G + H + +W P+G + + DKTC
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTL--KGHLDYSFASAWHPNGVTFATGNQDKTC 337
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKR 455
IWD + + GN + + G+++ + ++ D + K ++
Sbjct: 338 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 393
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
+++S DG + I++ D E K +G +++PDGK +LS SGD
Sbjct: 206 IKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGD 265
Query: 279 KTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKHLISVSLSGVINYLDVDNPDKP 449
T W+IE + V VSCL W + + V+ S V+ + ++ + P
Sbjct: 266 GTLHAWNIENPSEVARWENNIGV----VSCLKWAPRRAMFVAASTVLTFWIPNDGESP 319
Score = 35.5 bits (78), Expect = 0.032
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGG---VYGISWSPD 248
H R AV Y G +FA A G + L+D + KG + G V I +S D
Sbjct: 153 HLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYD-KGPFDTFLVGGDTAEVNDIKFSND 211
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQ-QVSCLWQGKHLISVSLSGVINYL 425
GK +L + + + D ++ F++ + + + GK+++S S G ++
Sbjct: 212 GKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAW 271
Query: 426 DVDNPDKPKR 455
+++NP + R
Sbjct: 272 NIENPSEVAR 281
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 93 QAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCS 272
+ V ++ GSL A+ DG ++D T + EI + +SWS G +LL +
Sbjct: 27 KCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSA 86
Query: 273 GDKTCAIWDIETMQR 317
DK+ +WD+ T ++
Sbjct: 87 ADKSLTLWDVSTGEK 101
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
++ +S DG+ A+ G DG + ++D +T +L G ++ G + +WS DGK LL+
Sbjct: 308 SIAFSNDGAYLATVGRDGYLRIFDFSTQKLV--CGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 276 DKTCAIWDIE 305
D +W +E
Sbjct: 366 DDLVQVWSME 375
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +3
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
G +L +V G + D K + + + C A +GK + T D V W+
Sbjct: 315 GAYLATVGRDGYLRIFDFST-QKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS 373
Query: 558 VDSGEARHVEGQGHGNQVNGM 620
++ + G+GH + V+G+
Sbjct: 374 MEDRKV-VAWGEGHNSWVSGV 393
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 44.8 bits (101), Expect = 5e-05
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLY---DGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
V++S G A+A D ++ D ELK + S H+ V +SWSPD +LL+C
Sbjct: 230 VQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLES--HQNPVSFVSWSPDDTKLLTC 287
Query: 270 SGDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLW 374
+ +WD++T + R T N N SC W
Sbjct: 288 GNAEVLKLWDVDTGVLRHTFGN--NNTGFTVSSCAW 321
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +3
Query: 33 VFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAH 212
V + + K T + H V +SPD + + G + L+D T L+ G+
Sbjct: 253 VLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNT 312
Query: 213 KGGVYGISWSPDGKQLLSCSGD--KTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
V +W PD +L+ S D + +WD + + + ++ G+
Sbjct: 313 GFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDG-NEIKAWRGTRIPKVVDLAVTPDGES 371
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK 512
+I+V I L+++ K +RV+ +PIT L++ G+GK
Sbjct: 372 MITVFSDKEIRILNLET--KVERVI-SEEQPITSLSISGDGK 410
Score = 32.7 bits (71), Expect = 0.23
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 8/160 (5%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QG 380
AHK V+ + +S GK L + S D T IW + + L + + +N W
Sbjct: 222 AHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDD 281
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNK---PITCLALHGNGKTVYTASHD--GCV 545
L++ + V+ DVD R G+N ++ A + + S D +
Sbjct: 282 TKLLTCGNAEVLKLWDVDT--GVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 546 TEWNVDSGEARHVEGQGHGNQVNGMRTTKDG-SLLTIGID 662
W+ D E + G V+ + T DG S++T+ D
Sbjct: 340 VMWDTDGNEIKAWRGTRIPKVVD-LAVTPDGESMITVFSD 378
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV---DSGEARHVEGQGHGNQ 608
P + ++L+ H + + +GK + TAS D W V + E +H + H N
Sbjct: 213 PSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTL-ESHQNP 271
Query: 609 VNGMRTTKDGS-LLTIGIDDTL 671
V+ + + D + LLT G + L
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVL 293
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG---KHLI 392
+ +S S DGK + + +WD+ + L G+ + + G +
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 393 SVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALH-GNGKTVYTASHDGCVTEW 554
S S + ++ N KP VL GH+ + C++ + N + + +AS D + W
Sbjct: 460 SGSEDSQVYIWNLKNT-KPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 44.8 bits (101), Expect = 5e-05
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMG--NAVENQQVSCLWQGK 383
HKG V +S++ DG LLS S D+ +WD +T F+ G N + + +
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMG-HNKPITCLALH-GNGKTVYTASHDGCVTEWN 557
+++ + + Y + + + L+G H P+ LA+ G+ + YT DG V ++
Sbjct: 114 TIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHFD 173
Query: 558 V 560
+
Sbjct: 174 L 174
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP--D 248
+H V ++ DG + S D ++ L+D T+ +K S H ++ + P D
Sbjct: 53 KHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDS-GHFNNIFQAKFMPFSD 111
Query: 249 GKQLLSCSGDK 281
+ +++ + DK
Sbjct: 112 DRTIVTSAADK 122
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 44.8 bits (101), Expect = 5e-05
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 13/213 (6%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T Q HT ++ ++P+ + SA DG++ +++ TS+ I P V ++SP
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPC--AWVMTCAFSP 117
Query: 246 DGKQLLSCSG-DKTCAIWDIE-TMQRTTLFNMGNAVENQQ--VSCLW----QGKHLISVS 401
+G Q ++C G D C+I+ + T + + + + VSC + HLI+ S
Sbjct: 118 NG-QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 402 LSGVINYLDVDNPDKPK----RVLMGHNKPITCLALHGNGKTVY-TASHDGCVTEWNVDS 566
DV K GH + +++ G+ + + S D W+ +
Sbjct: 177 GDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRA 236
Query: 567 GEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
GH VN ++ DG G DD
Sbjct: 237 ASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSP---AHKGGVYGISWSPD 248
H V++ PDG F + DG LYD T + ++ P G V I++S
Sbjct: 247 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 305
Query: 249 GKQLLS-CSGDKTCAIWD 299
G+ L + + + TC +WD
Sbjct: 306 GRLLFAGYASNNTCYVWD 323
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL 371
H+G V + + PDG + + S D TC ++DI T + ++ EN V+ +
Sbjct: 247 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSI 300
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 44.8 bits (101), Expect = 5e-05
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 13/213 (6%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T Q HT ++ ++P+ + SA DG++ +++ TS+ I P V ++SP
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPC--AWVMTCAFSP 117
Query: 246 DGKQLLSCSG-DKTCAIWDIE-TMQRTTLFNMGNAVENQQ--VSCLW----QGKHLISVS 401
+G Q ++C G D C+I+ + T + + + + VSC + HLI+ S
Sbjct: 118 NG-QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSS 176
Query: 402 LSGVINYLDVDNPDKPK----RVLMGHNKPITCLALHGNGKTVY-TASHDGCVTEWNVDS 566
DV K GH + +++ G+ + + S D W+ +
Sbjct: 177 GDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRA 236
Query: 567 GEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
GH VN ++ DG G DD
Sbjct: 237 ASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSP---AHKGGVYGISWSPD 248
H V++ PDG F + DG LYD T + ++ P G V I++S
Sbjct: 247 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 305
Query: 249 GKQLLS-CSGDKTCAIWDIETMQRTTLFNMGNAVEN--QQVSCL 371
G+ L + + + TC +WD T+ + ++G ++ ++SCL
Sbjct: 306 GRLLFAGYASNNTCYVWD--TLLGEVVLDLGLQQDSHRNRISCL 347
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 96 AVRYSPDGSL-FASAGFDGKIFLYDGATSELKGEIG--SPAHKGGVYGISWSPDGKQLLS 266
++ +S G L FA + +++D E+ ++G +H+ + + S DG L +
Sbjct: 299 SIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCT 358
Query: 267 CSGDKTCAIW 296
S D IW
Sbjct: 359 GSWDSNLKIW 368
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
++ +S DG+ A+ G DG + ++D T +L G ++ G + SWS DGK +L+
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQKLV--CGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 276 DKTCAIWDIE 305
D +W +E
Sbjct: 366 DDLVQVWSME 375
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNK--PITCLALHGNGKTVYTASHDGCVTE 551
G HL +V G + D K V G + + C + +GK + T D V
Sbjct: 315 GAHLATVGRDGYLRIFDFLTQ---KLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQV 371
Query: 552 WNVDSGEARHVEGQGHGNQVNGM 620
W+++ + G+GH + V+G+
Sbjct: 372 WSMEDRKV-VAWGEGHNSWVSGV 393
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 44.8 bits (101), Expect = 5e-05
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 7/204 (3%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
HT+ AV + G + S DG + ++D E + E S + V + P+ +
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP---VNTVVLHPNQTE 139
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV------IN 419
L+S + +WD+ + + ++ +W G +++ + G +
Sbjct: 140 LISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLC 199
Query: 420 YLDVDNPDKPKRVLMGHNKPIT-CLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQG 596
+P L HN I CL GN K + TAS D V WN+D + V G
Sbjct: 200 ERQTMTEFEPLHKLQAHNSHILKCLLSPGN-KYLATASSDKTVKIWNLDGFKLEKVL-TG 257
Query: 597 HGNQVNGMRTTKDGSLLTIGIDDT 668
H V + DG L DT
Sbjct: 258 HERWVWDCDFSMDGEYLVTASSDT 281
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Frame = +3
Query: 165 DGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW----DIETMQRTTLFN 332
D + EL E+G+P + W DG +++ + TC +W + +TM +
Sbjct: 157 DLCSCELVPEVGTPIRS---LTVMW--DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLH 211
Query: 333 MGNAVENQQVSCLWQ--GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGN 506
A + + CL K+L + S + ++D K ++VL GH + + +
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDG-FKLEKVLTGHERWVWDCDFSMD 270
Query: 507 GKTVYTASHDGCVTEWNVDSGEARHV 584
G+ + TAS D W++ +G+ V
Sbjct: 271 GEYLVTASSDTTARLWSMRAGKEEMV 296
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/101 (23%), Positives = 42/101 (41%)
Frame = +3
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
L + S D+T +W T + F + N+ +GK + + + + L N
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSYN 72
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
P P R + H K + + G +Y+ S DG V W++
Sbjct: 73 PHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL 113
Score = 30.7 bits (66), Expect = 0.92
Identities = 24/97 (24%), Positives = 37/97 (38%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
AH + SP K L + S DKT IW+++ + + G+ G++
Sbjct: 215 AHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLT-GHERWVWDCDFSMDGEY 273
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLAL 497
L++ S S L K + V H K C L
Sbjct: 274 LVTAS-SDTTARLWSMRAGKEEMVYQAHRKATVCCTL 309
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 44.8 bits (101), Expect = 5e-05
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Frame = +3
Query: 87 FAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLS 266
F+ + +S D + A+ G D L+D + ++ + H V I + D +L+
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTL--TGHSKKVTSIKFVGDTDLVLT 281
Query: 267 CSGDKTCAIW----DIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD 434
S DKT IW D R TL ++ E + V+ K+ +S SL + D+
Sbjct: 282 ASSDKTVRIWGCSEDGNYTSRHTL--KDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLS 339
Query: 435 NPDKPKRVLMGHNKPI--TCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQ 608
+ +V + T A H +G + T + V W+V S +A + GH +
Sbjct: 340 SGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKS-QANVAKFGGHNGE 398
Query: 609 VNGMRTTKDGSLL-TIGID 662
+ + +++G L T +D
Sbjct: 399 ITSISFSENGYFLATAALD 417
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 44.4 bits (100), Expect = 7e-05
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAH--KGGVYGISWSPDGKQLLSCSGD- 278
SP + A DGKI +++ +L EI + H +G V +S+S DG+ LL+ G
Sbjct: 190 SPALDVVAIGCADGKIHVHN---IKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSF 246
Query: 279 KTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRV 458
+IW++ + ++ + ++ L L+S S + D D R+
Sbjct: 247 GVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRL 306
Query: 459 LM---GHNKPITCLALHGNGKTVYTASHD 536
L GH+ P C+ + NG+ + +A D
Sbjct: 307 LRFRSGHSAPPLCIRFYSNGRHILSAGQD 335
Score = 36.7 bits (81), Expect = 0.014
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
AH G V G++ ++S +WD + + + +++G ++ V ++ +
Sbjct: 472 AHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSL----VKIVYHRVN 527
Query: 387 --LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
L +V+ VI DV K R GH IT L +GK V ++S DG + W+V
Sbjct: 528 GLLATVADDFVIRLYDVVTL-KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Score = 30.3 bits (65), Expect = 1.2
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKG--EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
+L SAG+ G + ++D ELK ++G K I + L + + D +
Sbjct: 487 TLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVK-----IVYHRVNGLLATVADDFVIRL 541
Query: 294 WDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHN 473
+D+ T++ F G+ + GK +IS S+ G + DV + V + +
Sbjct: 542 YDVVTLKMVREFR-GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHV--D 598
Query: 474 KPITCLALHGNGKTVYTASHD 536
PIT L+L N + TA D
Sbjct: 599 VPITALSLSPNMDVLATAHSD 619
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.4 bits (100), Expect = 7e-05
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 6/168 (3%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDG-SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPD 248
QEH R Q+V Y+P F ++ +D + L+ A H VY W+P
Sbjct: 103 QEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW--AMDRPASVRTFKEHAYCVYQAVWNPK 160
Query: 249 -GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH---LISVSLSGVI 416
G S SGD T IWD+ T + A + + +SC W L + S+ +
Sbjct: 161 HGDVFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCILATSSVDKTV 217
Query: 417 NYLDVDNPDKPKRVLMGHNKPITCLALHGNGKT-VYTASHDGCVTEWN 557
DV + P VL GH + + + ++ + + S+D V W+
Sbjct: 218 KVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 44.4 bits (100), Expect = 7e-05
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL-FNMGNAVENQQVSC-LWQG 380
AH G V G+ + DG LLS D +WDIE+ + T + F G N+ +
Sbjct: 310 AHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDD 369
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
L+ V + + + + +L GH + + + N + +YT+ D + W+
Sbjct: 370 PALVFVPCMKTVKAFGMWS-GRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 44.4 bits (100), Expect = 7e-05
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFK-FKCTKQEHTRFAQAVRYSPDGSLFASAGFDG-KIFLYDGATSELKG 191
D T+ ++ +K +K R ++ P G + + D +IF++ T ++K
Sbjct: 412 DGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKD 471
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL 371
+ H+ V+G+ +SP + L S S D T +WD+ + T+ + + V+
Sbjct: 472 ILSG--HEAPVHGLMFSPLTQLLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFR 528
Query: 372 WQGKHLISVSLSGVINYLD 428
GK L S +L G IN+ D
Sbjct: 529 PDGKQLASSTLDGQINFWD 547
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDG-S 641
GH + C+ + + + T + D V WNV SG + H N V + D S
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTC-FITFTEHTNAVTALHFMADNHS 405
Query: 642 LLTIGIDDTL 671
LL+ +D T+
Sbjct: 406 LLSASLDGTV 415
Score = 32.3 bits (70), Expect = 0.30
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 3/195 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
DN + V+ T EHT A+ + D SA DG + +D +
Sbjct: 370 DNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTY 429
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDK-TCAIWDIETMQRTTLFNMGNA-VENQQVSCL 371
+P + V ++ P G + + + D +W +T Q + + A V S L
Sbjct: 430 TTPTPRQFV-SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPL 488
Query: 372 WQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTE 551
Q L S S + DV K HN + +A +GK + +++ DG +
Sbjct: 489 TQ--LLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINF 545
Query: 552 WNVDSGEARH-VEGQ 593
W+ G + +EG+
Sbjct: 546 WDTIEGVLMYTIEGR 560
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 2/160 (1%)
Frame = +3
Query: 147 GKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL 326
G++ ++D T + H V +++SPD + L + + D +W++ M T
Sbjct: 329 GQLLVWDWRTETYI--LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV--MSGTCF 384
Query: 327 FNMGNAVENQQVSCLWQGKH-LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG 503
H L+S SL G + D K + L
Sbjct: 385 ITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADP 444
Query: 504 NGKTVYTASHDGC-VTEWNVDSGEARHVEGQGHGNQVNGM 620
+G V + D + W+ +G+ + + GH V+G+
Sbjct: 445 SGDVVCAGTLDSFEIFVWSKKTGQIKDIL-SGHEAPVHGL 483
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 44.4 bits (100), Expect = 7e-05
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFK-FKCTKQEHTRFAQAVRYSPDGSLFASAGFDG-KIFLYDGATSELKG 191
D T+ ++ +K +K R ++ P G + + D +IF++ T ++K
Sbjct: 452 DGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKD 511
Query: 192 EIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL 371
+ H+ V+G+ +SP + L S S D T +WD+ + T+ + + V+
Sbjct: 512 ILSG--HEAPVHGLMFSPLTQLLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFR 568
Query: 372 WQGKHLISVSLSGVINYLD 428
GK L S +L G IN+ D
Sbjct: 569 PDGKQLASSTLDGQINFWD 587
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDG-S 641
GH + C+ + + + T + D V WNV SG + H N V + D S
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTC-FITFTEHTNAVTALHFMADNHS 445
Query: 642 LLTIGIDDTL 671
LL+ +D T+
Sbjct: 446 LLSASLDGTV 455
Score = 32.3 bits (70), Expect = 0.30
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 3/195 (1%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
DN + V+ T EHT A+ + D SA DG + +D +
Sbjct: 410 DNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTY 469
Query: 198 GSPAHKGGVYGISWSPDGKQLLSCSGDK-TCAIWDIETMQRTTLFNMGNA-VENQQVSCL 371
+P + V ++ P G + + + D +W +T Q + + A V S L
Sbjct: 470 TTPTPRQFV-SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPL 528
Query: 372 WQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTE 551
Q L S S + DV K HN + +A +GK + +++ DG +
Sbjct: 529 TQ--LLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINF 585
Query: 552 WNVDSGEARH-VEGQ 593
W+ G + +EG+
Sbjct: 586 WDTIEGVLMYTIEGR 600
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 2/160 (1%)
Frame = +3
Query: 147 GKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL 326
G++ ++D T + H V +++SPD + L + + D +W++ M T
Sbjct: 369 GQLLVWDWRTETYI--LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV--MSGTCF 424
Query: 327 FNMGNAVENQQVSCLWQGKH-LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG 503
H L+S SL G + D K + L
Sbjct: 425 ITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADP 484
Query: 504 NGKTVYTASHDGC-VTEWNVDSGEARHVEGQGHGNQVNGM 620
+G V + D + W+ +G+ + + GH V+G+
Sbjct: 485 SGDVVCAGTLDSFEIFVWSKKTGQIKDIL-SGHEAPVHGL 523
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +3
Query: 51 FKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYG 230
+K T + HT + +SPD S+ AS D + +++ T + H V G
Sbjct: 108 WKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRG--HLSLVKG 165
Query: 231 ISWSPDGKQLLSCSGDKTCAIW 296
++W P G + S S DKT IW
Sbjct: 166 VTWDPIGSFIASQSDDKTVIIW 187
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL 326
H V ++WSPD L S S D T IW++ T TT+
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTV 155
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAI 293
V +SWSPDG L +CS D T A+
Sbjct: 331 VVDLSWSPDGYSLFACSLDGTVAM 354
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 43.6 bits (98), Expect = 1e-04
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG- 275
+++S D AS G D K+F+++ +++ + H V I+WSP LL+ G
Sbjct: 298 LKWSSDNRELASGGNDNKLFVWNQHSTQ--PVLRFCEHAAAVKAIAWSPHHFGLLASGGG 355
Query: 276 --DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI-NYLDV-DNPD 443
D+ W+ T + + V N +W VS G N + V P
Sbjct: 356 TADRCIRFWNTTTNTHLNCVDTNSQVCN----LVWSKNVNELVSTHGYSQNQIIVWKYPT 411
Query: 444 KPK-RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
K L GH+ + LA+ +G+T+ T + D + WNV
Sbjct: 412 MSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLF 329
HK + G+ WS D ++L S D +W+ + Q F
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRF 330
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +3
Query: 219 GVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLI-S 395
G++ + +S DG+++++ S D + ++D+E R +L + + + V + +LI S
Sbjct: 231 GIFSVKFSTDGREVVAGSSDDSIYVYDLEA-NRVSLRTVAHTSDVNTVCFADESGNLILS 289
Query: 396 VSLSGVINYLD---VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV-- 560
S + D DKP VL+GH + +T + G+G+ + D + W++
Sbjct: 290 GSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRK 349
Query: 561 --DSGEARH 581
S ARH
Sbjct: 350 MSSSAPARH 358
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETM 311
H GV I DG+ +S D+T +WDI M
Sbjct: 317 HLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKM 350
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 43.6 bits (98), Expect = 1e-04
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 10/178 (5%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDG 251
E+T V +SPDG L A + +Y E L+ + AH G V +++S
Sbjct: 417 EYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPN 476
Query: 252 KQL--LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH---LISVSLSGVI 416
+QL ++C DKT +WD T + F G+ V C Q ++ + S ++ G I
Sbjct: 477 QQLCVVTCGEDKTIKVWDAVTGNKLHTFE-GHEAPVYSV-CPHQKENIQFIFSTAVDGKI 534
Query: 417 NYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
DN + + T +A +G +++ S +G + EWN G +
Sbjct: 535 KAWLYDNMGS-RVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVK 591
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/111 (21%), Positives = 49/111 (44%)
Frame = +3
Query: 240 SPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVIN 419
S + ++S SG K +++++ T + T F M ++ Q ++I++ +
Sbjct: 854 SKNDSYVMSASGGKI-SLFNMMTFKTMTTF-MAPPPAATSLAFHPQDNNIIAIGMDDSSI 911
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
+ D+ K L GH K +T LA + ++ D + W++D E
Sbjct: 912 QIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWE 962
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 43.6 bits (98), Expect = 1e-04
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 10/178 (5%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE-LKGEIGSPAHKGGVYGISWSPDG 251
E+T V +SPDG L A + +Y E L+ + AH G V +++S
Sbjct: 417 EYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPN 476
Query: 252 KQL--LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH---LISVSLSGVI 416
+QL ++C DKT +WD T + F G+ V C Q ++ + S ++ G I
Sbjct: 477 QQLCVVTCGEDKTIKVWDAVTGNKLHTFE-GHEAPVYSV-CPHQKENIQFIFSTAVDGKI 534
Query: 417 NYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYT--ASHDG--CVTEWNVDSGEAR 578
DN + + T +A +G +++ S +G + EWN G +
Sbjct: 535 KAWLYDNMGS-RVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVK 591
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/111 (21%), Positives = 49/111 (44%)
Frame = +3
Query: 240 SPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVIN 419
S + ++S SG K +++++ T + T F M ++ Q ++I++ +
Sbjct: 854 SKNDSYVMSASGGKI-SLFNMMTFKTMTTF-MAPPPAATSLAFHPQDNNIIAIGMDDSSI 911
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
+ D+ K L GH K +T LA + ++ D + W++D E
Sbjct: 912 QIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWE 962
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 43.2 bits (97), Expect = 2e-04
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIW---DIETMQRTTLFNMG--NAVENQQVSCLW 374
H V G++ S DG L S S D+T IW D + ++ T + NAV + ++
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 375 QGKHLISVSL-SGVINYLDVDNPDKPK--RVLMGHNKPITCLALHG-NGKTVYTASHDGC 542
G + + IN +V K +L HN I LAL G NG +++ DG
Sbjct: 224 TGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGS 283
Query: 543 VTEWNVDSGEARHVEG--QGHGNQVNGMRTTKD 635
+ W D G V G +GH V + D
Sbjct: 284 ILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD 316
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 507 GKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMR 623
GK +YT S+DG V WN ++ E E +G+ + G R
Sbjct: 48 GKRLYTGSNDGVVRLWNANTLETL-AEASSNGDVITGER 85
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/109 (24%), Positives = 46/109 (42%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
SPDG L A G + L D T K G H + +W P+G+ L + + D TC
Sbjct: 286 SPDGKLVAVLGDSPECLLAD--TGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTC 343
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD 434
+WD+ + ++ GN + + G+ L + ++ D +
Sbjct: 344 RLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTE 392
Score = 27.5 bits (58), Expect = 8.6
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = +3
Query: 240 SPDGK-QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI 416
+P G ++++ + D T ++D F +V N +S GK L++V
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWSVNN--ISTSPDGK-LVAVLGDSPE 300
Query: 417 NYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQG 596
L K L GH A H NG+ + T + D W+V + +G
Sbjct: 301 CLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKG 360
Query: 597 HGNQVNGMRTTKDGSLLTI 653
+ + +R T DG L +
Sbjct: 361 NMGAIRALRFTSDGRFLAM 379
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-DGKQLLSCSGDKTCAIW 296
S AS+ F+G + ++D A ++L E+ H+ V+ I +S D L S S D + +W
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
Query: 297 DI-ETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHN 473
I + + T+ N Q S G+ L S + Y D+ NP P ++GH+
Sbjct: 605 SINQGVSIGTIKTKANICCVQFPS--ETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHH 662
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEWNV 560
K ++ + + T+ ++S D + W++
Sbjct: 663 KTVSYVRF-VDSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-DGKQLLSCSGDKTCAIW 296
S AS+ F+G + ++D A ++L E+ H+ V+ I +S D L S S D + +W
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLW 604
Query: 297 DI-ETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHN 473
I + + T+ N Q S G+ L S + Y D+ NP P ++GH+
Sbjct: 605 SINQGVSIGTIKTKANICCVQFPS--ETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHH 662
Query: 474 KPITCLALHGNGKTVYTASHDGCVTEWNV 560
K ++ + + T+ ++S D + W++
Sbjct: 663 KTVSYVRF-VDSSTLVSSSTDNTLKLWDL 690
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Frame = +3
Query: 264 SCSGDKTCAIWDIETMQRTTLFNMGNA-VENQQVSCLW---QGKHLISVSLSGVINYL-D 428
S S D T +WD ++ + A + V C+ G ++V + Y+ D
Sbjct: 39 SGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYD 98
Query: 429 VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEA-RHVEGQGHGN 605
+ P L GH K ++ + G TV TA DGC+ W+V+ G R EG +
Sbjct: 99 IRKLVDPALTLQGHTKTVSYVRFLDGG-TVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNR 157
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
G+ ++G+L G ++
Sbjct: 158 NFVGLSVWRNGALFGCGSEN 177
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVEN-QQVSCLWQGK 383
H V+ ++W+P ++ SCS DKT IW+ ++ R+ +G+ + + +C+W+
Sbjct: 19 HTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVWENF 78
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
S S+S VL GH + ++ + +G + T D V W +
Sbjct: 79 ATDSESVS----------------VLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQ 122
Query: 564 SGE 572
E
Sbjct: 123 PEE 125
Score = 41.1 bits (92), Expect = 7e-04
Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 13/163 (7%)
Frame = +3
Query: 141 FDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ-- 314
FDG +++ ++ + H+ V +SW+ G L +C DK+ IW+I+ +
Sbjct: 68 FDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDD 127
Query: 315 --RTTLFNMGNAVENQQVSCLWQGKH--LISVSLSGVINYLDVDNPDKPKRVLM------ 464
T G++ + + V LW L S S I ++ D +
Sbjct: 128 EFDTIAVLTGHSEDVKMV--LWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELN 185
Query: 465 -GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG 590
GH+ + ++ + G + T S D V W D + EG
Sbjct: 186 NGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEG 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLY-----DGATS--ELKGEIGSPAHKGGVYGIS 236
H+ + V + P + S +D I ++ DG + + E+ + H V+ IS
Sbjct: 138 HSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNN-GHSSTVWSIS 196
Query: 237 WSPDGKQLLSCSGDKTCAIW--DIETMQ 314
++ G ++++CS D IW DI MQ
Sbjct: 197 FNAAGDKMVTCSDDLAVKIWKTDISRMQ 224
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 132 SAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
SA DG I L+D S + P H+G V G++ S DG L+SC D T +W++
Sbjct: 74 SASMDGDIRLWD--ISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +3
Query: 18 DNTIAVFEGPPF-KFKCTKQEHTRFAQAVRYSPDGSLFASAGFDG--KIFLYDGATSELK 188
D + F+G + KC ++H + +SP G F + +D +IF Y+G S
Sbjct: 257 DGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSR-- 314
Query: 189 GEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQR 317
EI V+ + +S D ++S S D +W + ++
Sbjct: 315 -EIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKASEQ 356
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/114 (22%), Positives = 51/114 (44%)
Frame = +3
Query: 330 NMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNG 509
N ++ E+ ++ G++L + + ++ DV + + GH ++CL
Sbjct: 218 NKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQ-AFPGHRNTVSCLCFRYGT 276
Query: 510 KTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDDTL 671
+Y+ S D V WNV+ +A E GH ++ + + LT+G D T+
Sbjct: 277 SELYSGSFDRTVKVWNVED-KAFITENHGHQGEILAIDALRKERALTVGRDRTM 329
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDG 251
+ H+R + A+ S DG A+ G D + ++D T E P H+ V + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAF--PGHRNTVSCLCFRYGT 276
Query: 252 KQLLSCSGDKTCAIWDIE 305
+L S S D+T +W++E
Sbjct: 277 SELYSGSFDRTVKVWNVE 294
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 41.9 bits (94), Expect = 4e-04
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG- 275
+++S D AS G D ++F+++ +++ + H V I+WSP LL+ G
Sbjct: 341 LKWSYDNRELASGGNDNRLFVWNQHSTQ--PVLKYSEHTAAVKAIAWSPHVHGLLASGGG 398
Query: 276 --DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI-NYLDV-DNPD 443
D+ W+ T T L ++ +Q + W VS G N + V P
Sbjct: 399 TADRCIRFWNTTT--NTHLSSIDTC--SQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPT 454
Query: 444 KPK-RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
K L GH + LA+ +G+T+ T + D + WNV
Sbjct: 455 MSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
HK V G+ WS D ++L S D +W+ + Q
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ 368
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/135 (20%), Positives = 55/135 (40%)
Frame = +3
Query: 153 IFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
++L+D ++ + +G V I+W+ DG L + +WD + ++
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 333 MGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK 512
G+ E++ S W L + + G I DV +GH + + L +GK
Sbjct: 174 GGH--ESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGK 231
Query: 513 TVYTASHDGCVTEWN 557
+ + +D V W+
Sbjct: 232 KLASGGNDNVVHIWD 246
Score = 36.3 bits (80), Expect = 0.019
Identities = 42/172 (24%), Positives = 63/172 (36%), Gaps = 11/172 (6%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHK-----GGVYGISWS 242
HT +++S G AS G D + ++D + H+ V ++W
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 243 PDGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
P LL+ G D W+ T G+ V S LW +S G
Sbjct: 277 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV----CSLLWSKSERELLSSHGF 332
Query: 414 I-NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
N L + P K L GH + +A +G TV +A+ D + WNV
Sbjct: 333 TQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGA--TSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW 296
+ + G DGKI D +S ++ +G H V G+ WS GK+L S D IW
Sbjct: 189 ILTTGGMDGKIVNNDVRIRSSIVETYLG---HTEEVCGLKWSESGKKLASGGNDNVVHIW 245
Query: 297 D 299
D
Sbjct: 246 D 246
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 41.5 bits (93), Expect = 5e-04
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 1/189 (0%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
+PDG SA D L +G T + G HKG V+ + + S S D +
Sbjct: 28 TPDGFFLISASKDSHPMLRNGETGDWIGTF--EGHKGAVWSSCLDNNALRAASASADFSA 85
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMG 467
+WD T F + V S K L++ ++ D++ D P +
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFS--EDTKSLLTGGFEKILRVFDMNRLDAPPTEVDK 143
Query: 468 HNKPITCLA-LHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSL 644
I L LH + + + + G V W+V SG+ V+ + V ++DG
Sbjct: 144 SPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKI--VQTLETKSPVTSAEVSQDGRY 201
Query: 645 LTIGIDDTL 671
+T T+
Sbjct: 202 ITTADGSTV 210
Score = 28.3 bits (60), Expect = 4.9
Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 2/199 (1%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDG 251
EH +A +S D + GF+ + ++D E+ G + ++W
Sbjct: 100 EHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDK--SPGSIRTLTWLHSD 157
Query: 252 KQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
+ +L SC+ +WD+ + + + V + +VS Q I+ + + + D
Sbjct: 158 QTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVS---QDGRYITTADGSTVKFWD 214
Query: 429 VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQ 608
++ K M N L +G+ D V ++ +GE +GH
Sbjct: 215 ANHFGLVKSYDMPCNIESASLE-PKSGEKFVAGGEDMWVRVFDFYTGEEIGC-NKGHHGP 272
Query: 609 VNGMRTTKDGSLLTIGIDD 665
V+ +R T G G +D
Sbjct: 273 VHCVRFTPTGLSYASGSED 291
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 41.5 bits (93), Expect = 5e-04
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 1/189 (0%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
+PDG SA D L +G T + G HKG V+ + + S S D +
Sbjct: 28 TPDGFFLISASKDSHPMLRNGETGDWIGTF--EGHKGAVWSSCLDNNALRAASASADFSA 85
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMG 467
+WD T F + V S K L++ ++ D++ D P +
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFS--EDTKSLLTGGFEKILRVFDMNRLDAPPTEVDK 143
Query: 468 HNKPITCLA-LHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSL 644
I L LH + + + + G V W+V SG+ V+ + V ++DG
Sbjct: 144 SPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKI--VQTLETKSPVTSAEVSQDGRY 201
Query: 645 LTIGIDDTL 671
+T T+
Sbjct: 202 ITTADGSTV 210
Score = 28.3 bits (60), Expect = 4.9
Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 2/199 (1%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDG 251
EH +A +S D + GF+ + ++D E+ G + ++W
Sbjct: 100 EHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDK--SPGSIRTLTWLHSD 157
Query: 252 KQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
+ +L SC+ +WD+ + + + V + +VS Q I+ + + + D
Sbjct: 158 QTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVS---QDGRYITTADGSTVKFWD 214
Query: 429 VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQ 608
++ K M N L +G+ D V ++ +GE +GH
Sbjct: 215 ANHFGLVKSYDMPCNIESASLE-PKSGEKFVAGGEDMWVRVFDFYTGEEIGC-NKGHHGP 272
Query: 609 VNGMRTTKDGSLLTIGIDD 665
V+ +R T G G +D
Sbjct: 273 VHCVRFTPTGLSYASGSED 291
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 41.1 bits (92), Expect = 7e-04
Identities = 46/206 (22%), Positives = 73/206 (35%), Gaps = 6/206 (2%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP 245
T HT AV + D S DG + ++D + E S A V + P
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA---AVNTVVLHP 129
Query: 246 DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSG----- 410
+ +L+S + +WD+ + + ++ +W G +++ + G
Sbjct: 130 NQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVW 189
Query: 411 -VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVE 587
++ +P L HN I L K + TAS D V WNVD + V
Sbjct: 190 RLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVL 249
Query: 588 GQGHGNQVNGMRTTKDGSLLTIGIDD 665
GH V + DG L D
Sbjct: 250 -TGHQRWVWDCVFSVDGEFLVTASSD 274
Score = 40.7 bits (91), Expect = 9e-04
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 7/186 (3%)
Frame = +3
Query: 63 CTKQ-EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISW 239
C K+ E V P+ + S +G I ++D + E+ P V ++
Sbjct: 112 CQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCEL-VPEVDTAVRSLTV 170
Query: 240 SPDGKQLLSCSGDKTCAIWDI----ETMQRTTLFNMGNAVENQQVSCLWQ--GKHLISVS 401
DG +++ + TC +W + +TM + A + CL K+L + S
Sbjct: 171 MWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATAS 230
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
+ +VD K ++VL GH + + +G+ + TAS D W++ +G+
Sbjct: 231 SDKTVKIWNVDG-FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVK 289
Query: 582 VEGQGH 599
V QGH
Sbjct: 290 VY-QGH 294
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLW--QG 380
AH G + SP K L + S DKT IW+++ + L + + C++ G
Sbjct: 209 AHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFK---LEKVLTGHQRWVWDCVFSVDG 265
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALH 500
+ L++ S S + L K +V GH+K C ALH
Sbjct: 266 EFLVTAS-SDMTARLWSMPAGKEVKVYQGHHKATVCCALH 304
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD- 434
L + S D T W+ ET + ++ N+ + KH ++ + + I DV+
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLE--ITPDKHYLAAACNPHIRLFDVNS 65
Query: 435 NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
N +P H + + + K +Y+ S DG V W++
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 41.1 bits (92), Expect = 7e-04
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Frame = +3
Query: 129 ASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWS-PDGKQLLSCSGDKTCAIWDIE 305
AS+ ++G + ++D T + E H+ + + +S + L+S S D +W
Sbjct: 437 ASSDYEGIVTVWDVTTRQSLMEYEE--HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWC-- 492
Query: 306 TMQRTTLFNMGNAVENQQVSCLWQGKHLISV-SLSGVINYLDVDNPDKPKRVLMGHNKPI 482
T Q ++ N+ V + I+V S I+Y D+ N +P V GH K +
Sbjct: 493 TRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAV 552
Query: 483 TCLALHGNGKTVYTASHDGCVTEWNV-DSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ + N + + +AS D + W+V D+ R +GH N+ N + T + L G
Sbjct: 553 SYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTF--RGHTNEKNFVGLTVNSEYLACG 608
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 450 KRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH---VEGQGHGNQVNGM 620
K + H+ + +A+ NG TVYT S D + W +GE RH + H + VN +
Sbjct: 228 KESIKAHDDAVNAIAVSTNG-TVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL 286
Query: 621 RTTKDGSLLTIGIDD 665
DGS+L G D
Sbjct: 287 ALNDDGSVLFSGSCD 301
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Frame = +3
Query: 18 DNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
D T+ ++ + K + + H A+ S +G+++ + D +I ++ T E + +
Sbjct: 214 DKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSA-DRRIRVWAKPTGEKRHTL 272
Query: 198 GSPA--HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL 371
+ HK V ++ + DG L S S D++ +W+ E ++ + L
Sbjct: 273 VATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
Query: 372 WQGKHLI---SVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK-----TVYTA 527
+ L+ S + I D+ VL GH KP+ LA + ++ +
Sbjct: 333 FNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISG 392
Query: 528 SHDGCVTEWNV 560
S DG V W V
Sbjct: 393 SLDGEVKCWKV 403
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 40.7 bits (91), Expect = 9e-04
Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 25/215 (11%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYD--GATSELKG--EIGSPAHKGGVYGISWSP 245
HT+ ++ G+ S +D + +YD G S L+ +I P+ V +SWSP
Sbjct: 176 HTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQI-EPSEGHQVRSVSWSP 234
Query: 246 DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQ--------VSC-LWQGKH---L 389
Q L +G I+D + + + + + ++C W + +
Sbjct: 235 TSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTKETV 294
Query: 390 ISVSLSGVINYLDVDN------PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTE 551
++ S G + DV+N KPK G P+T A +GK + DG +
Sbjct: 295 LTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGR-VPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 552 WNVDSGEARHVE---GQGHGNQVNGMRTTKDGSLL 647
W++ G + G+ H + + ++ + DG +L
Sbjct: 354 WSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRIL 388
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYD---GATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKT 284
DG A DG I ++ G S +G AH + + +S DG+ LLS S D +
Sbjct: 338 DGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGK-AHTDDITSVKFSSDGRILLSRSFDGS 396
Query: 285 CAIWDIETMQ 314
+WD+ M+
Sbjct: 397 LKVWDLRQMK 406
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYD--GATSELKGEIGSPAHKGGVYGISWSPDG 251
HT +V++S DG + S FDG + ++D LK G P + +++SPD
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQT-NVAFSPDE 430
Query: 252 KQLLS 266
+ +L+
Sbjct: 431 QIILT 435
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 9 RLRDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELK 188
R + VFEG P + T + Q + ++ G G + YD E+
Sbjct: 403 RQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGTSVEKDSTTG--GLLCFYDRTKLEIV 460
Query: 189 GEIG-SPAHKGGVYGISWSPDGKQLLSCSGDKT 284
++G SP V +W P Q+ + SGDK+
Sbjct: 461 QKVGISPT--SSVVQCAWHPRLNQIFATSGDKS 491
Score = 27.5 bits (58), Expect = 8.6
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Frame = +3
Query: 78 HTRFAQAV-RYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
H R + V S DGSL +D FL T +K ++ P + V +W DGK
Sbjct: 287 HPRTKETVLTSSEDGSLRI---WDVNNFL--SQTQVIKPKLARPG-RVPVTTCAWDRDGK 340
Query: 255 QLLSCSGDKTCAIWDIET--MQRTTLFNMGNAVENQQVSCLW--QGKHLISVSLSGVINY 422
++ GD + IW ++ R ++ +G A + S + G+ L+S S G +
Sbjct: 341 RIAGGVGDGSIQIWSLKPGWGSRPDIY-VGKAHTDDITSVKFSSDGRILLSRSFDGSLKV 399
Query: 423 LDVDNPDKPKRVLMG 467
D+ + +V G
Sbjct: 400 WDLRQMKEALKVFEG 414
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/135 (20%), Positives = 53/135 (39%)
Frame = +3
Query: 153 IFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
++L+D ++ + KG V I+W+ DG L + +WD + ++
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 333 MGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK 512
G+ E++ S W L + + G I DV +GH + + L +G
Sbjct: 208 GGH--ESRVGSLAWDNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGN 265
Query: 513 TVYTASHDGCVTEWN 557
+ +D V W+
Sbjct: 266 KQASGGNDNVVHIWD 280
Score = 39.1 bits (87), Expect = 0.003
Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 10/171 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG----SPAHKGGVYGISWSP 245
HT +++S G+ AS G D + ++D + + K H V ++W P
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
Query: 246 DGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI 416
LL+ G D W+ T G+ V S LW +S G
Sbjct: 311 FQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV----CSLLWSQSERELLSSHGFT 366
Query: 417 -NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
N L + P K L GH + +A NG TV +A+ D + WNV
Sbjct: 367 QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG- 275
+++S D AS G D ++ +++ + + ++ H V I+WSP LL+ G
Sbjct: 304 LKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTE--HTAAVKAITWSPHQSSLLASGGG 361
Query: 276 --DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI-NYLDV-DNPD 443
D+ W+ + + G+ V N W VS G N + + P
Sbjct: 362 TADRCIRFWNTTNGNQLNSIDTGSQVCN----LAWSKNVNEIVSTHGYSQNQIMLWKYPS 417
Query: 444 KPK-RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
K L GH+ + LA +G+T+ T + D + WNV
Sbjct: 418 MSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
HK V G+ WS D ++L S D +W+ + Q
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQ 331
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNA--VENQQVSCLWQGK 383
HKG V +S++ +G L+S S D+ +WD + F+ G+A V + +
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMG-HNKPITCLALH-GNGKTVYTASHDGCVTEWN 557
+++ + G++ + DK + +G H L + GN YT DG V ++
Sbjct: 118 TIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFD 177
Query: 558 V 560
+
Sbjct: 178 L 178
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 40.3 bits (90), Expect = 0.001
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 12/208 (5%)
Frame = +3
Query: 24 TIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAG-FDGKIFLYDGATSELKGEIG 200
TIAV E PP + +++ P G++ A AG + L+D A+ L +
Sbjct: 94 TIAVLEAPPSE-----------VWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLS 142
Query: 201 SP-----------AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAV 347
P + K V ++WSP+GK+L S D T ++D++ + N
Sbjct: 143 IPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMP 202
Query: 348 ENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTA 527
V + L S S G +N D + + GH + + +G + T
Sbjct: 203 VRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTL-LGSMSGHTSWVLSVDASPDGGAIATG 261
Query: 528 SHDGCVTEWNVDSGEARHVEGQGHGNQV 611
S D V W++ A H +QV
Sbjct: 262 SSDRTVRLWDLKMRAAIQTM-SNHNDQV 288
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/110 (21%), Positives = 45/110 (40%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTC 287
SPDG L A G + + D + ++ + HK + +W P+G L + + D C
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRG--HKDYSFASAWHPNGLILATGNQDTAC 314
Query: 288 AIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
+WDI + GN + + +G+ L + ++ D +
Sbjct: 315 RLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQS 364
Score = 37.5 bits (83), Expect = 0.008
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Frame = +3
Query: 243 PDGK-QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVIN 419
P G +L++ + D ++D ++ R + F + +V N VS GK L V S
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSP--DGKLLAVVGDSTECL 273
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGH 599
D + K L GH A H NG + T + D W++ + +G+
Sbjct: 274 ISD-SHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGN 332
Query: 600 GNQVNGMRTTKDGSLLTI 653
+ G++ T +G L +
Sbjct: 333 MGAIRGLKFTPEGRFLAM 350
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 35.1 bits (77), Expect = 0.043
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGS-LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
H R + ++P + A+A D + L+D + S H+G V+ + W P+ +
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK-HEGEVFQVEWDPNHE 318
Query: 255 QLLSCSG-DKTCAIWDI 302
+L+ SG D+ +WDI
Sbjct: 319 TVLASSGEDRRLMVWDI 335
Score = 32.3 bits (70), Expect(2) = 0.001
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +3
Query: 150 KIFLYDGA-------TSELKGEIGSPAHKGGVYGISWSPDGK-QLLSCSGDKTCAIWDIE 305
++FL+D A TSE ++ H+ YG++WS + LLS S D+ +WD+
Sbjct: 141 EVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVS 200
Query: 306 TMQRTTLFNMGNAVENQQ 359
+ N + E Q
Sbjct: 201 ATATDKVLNPMHVYEGHQ 218
Score = 27.1 bits (57), Expect(2) = 0.001
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 447 PKRVLMGHNKPITCLALHGNGKTVYTASHDGC-VTEWNVDSGEARHVEGQGHGNQVN 614
P V GH I +A H + ++ ++ D C + W++ + + +H + + H ++N
Sbjct: 210 PMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQH-QVKVHEREIN 265
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
H+G ++ I WS DG +++S S D++ IW+I++ +
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQE 268
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQ 314
H+G ++ I WS DG +++S S D++ IW+I++ +
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQE 268
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 39.5 bits (88), Expect = 0.002
Identities = 40/147 (27%), Positives = 69/147 (46%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
S AS+ FDG + ++D A S+L E+ HK V+ I S LL+ D +
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKE--HKKRVWSIDISSADPTLLASGSDDGTGV-S 653
Query: 300 IETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKP 479
I T++ T N+ V+ S G+ L S + Y D+ NP P ++GH+K
Sbjct: 654 IGTIK--TKANVC-CVQFPSDS----GRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKT 706
Query: 480 ITCLALHGNGKTVYTASHDGCVTEWNV 560
++ + + T+ ++S D + W++
Sbjct: 707 VSYVKF-VDSSTLVSSSTDNTLKLWDL 732
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 456 VLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKD 635
++ GH +P+T L + NG +++ + D T W D+GE R +GH V ++D
Sbjct: 32 LMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGE-RLGTYRGHSGAVWCCDISRD 90
Query: 636 GSLLTIGIDD 665
S L G D
Sbjct: 91 SSRLITGSAD 100
Score = 38.7 bits (86), Expect = 0.003
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 12/208 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H R +RY+ +G L S D ++ E G H G V+ S D +
Sbjct: 36 HERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRG--HSGAVWCCDISRDSSR 93
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS-----CLWQGKHLISVSLSGVINY 422
L++ S D+T +WD+++ + F G + S + H + S + +
Sbjct: 94 LITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKR 153
Query: 423 LDVDNPDK-PKRVLM----GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE--ARH 581
+ D D+ VL+ K I +T+ + D + W+ ++G+ +
Sbjct: 154 IAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQS 213
Query: 582 VEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
E GH + + D S G D
Sbjct: 214 DEEVGHKEAITSLCKAADDSHFLTGSHD 241
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDK 281
+ P S G D I ++D T +L K HK + + + D L+ S DK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDK 242
Query: 282 TCAIWDIETM 311
T +WD+ T+
Sbjct: 243 TAKLWDMRTL 252
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLY 164
A+ +SPDG F+S G DG + L+
Sbjct: 322 ALAFSPDGKSFSSGGEDGYVRLH 344
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 120 SLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLL-SCSGDKTCAIW 296
+LF SAG DG++ ++D T++++ ++ H+ V +S++P + +L + S D T A++
Sbjct: 231 NLFGSAGEDGRLVIWDTRTNQMQHQV--KVHEREVNYLSFNPFNEWVLATASSDSTVALF 288
Query: 297 DIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
D+ + ++ ++ E + W H ++ SG
Sbjct: 289 DLRKLNAP--LHVMSSHEGEVFQVEWDPNHETVLASSG 324
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGS-LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
H R + ++P + A+A D + L+D + S +H+G V+ + W P+ +
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMS-SHEGEVFQVEWDPNHE 317
Query: 255 QLLSCSG-DKTCAIWDI 302
+L+ SG D+ +WD+
Sbjct: 318 TVLASSGEDRRLMVWDL 334
Score = 35.5 bits (78), Expect = 0.032
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 150 KIFLYDGA-------TSELKGEIGSPAHKGGVYGISWSPDGK-QLLSCSGDKTCAIWDIE 305
++FL+D A TSE ++ H YG+SWSP + LLS S D+ +WD+
Sbjct: 140 EVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVS 199
Query: 306 TMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
+ + N E + + H+ + +L G
Sbjct: 200 ATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFG 234
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSP------AHKGGVYGI 233
Q H+ + +S D +L S D ++ ++ GE+ AHK ++
Sbjct: 644 QSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTD-NGEVSHKLMAKVEAHKRIIWAC 702
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQR 317
SW+P G Q + S DKT IW +E R
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSVENDAR 730
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSELKGEIGS-----PAHKGGVYGISWSPDGKQLLSC 269
+SP+ + G+ G L+ +S + E H V ++W+ G+ LLS
Sbjct: 374 WSPNSLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSV 433
Query: 270 SGDKTCAIW 296
S D+T ++
Sbjct: 434 SQDQTTRVF 442
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSEL----KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCA 290
L AS G++F++ SE K H+ V + WSPD L+S S D +C
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 291 IWDI 302
IWD+
Sbjct: 79 IWDV 82
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + +++SPD + S D ++D + + + H V G++W P K
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHY--VQGVAWDPLAKY 109
Query: 258 LLSCSGDKTCAIW 296
+ S S D+TC I+
Sbjct: 110 VASLSSDRTCRIY 122
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Frame = +3
Query: 123 LFASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
+ A+A DG + LY + E S P G ++WSPD K++ S S D WD
Sbjct: 167 ILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWD 226
Query: 300 IETMQRTTLFNMG-NAVENQQVSCLW-----QGKHLISVSLSGVINYLDVDNPDKPKRVL 461
+ G + + C+W + L+S +G + + D ++
Sbjct: 227 ATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEH-GTLLEAH 285
Query: 462 MGHNKPITCLALHGNGKTVYTASHDGCV 545
H + LA + V++A DG V
Sbjct: 286 SNHKGDVNTLAAAPSHNRVFSAGADGQV 313
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 19/148 (12%)
Frame = +3
Query: 108 SPDGSLFASAGF--DGKIF--LY--DGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
SP+G A+A F D K++ +Y DG+ E+ + HK V + +SP+ +Q+++
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 270 SGDKTCAIWDI-------ETMQRTTLFNM------GNAVENQQVSCLWQGKHLISVSLSG 410
S D + +W+I E + +F + GN + ++S +GK +++ S
Sbjct: 308 SKDGSIRVWNINVRYHLDEDPKTLKVFPIPLCDSGGNPLHYDRLSLCPEGK-ILAASHGS 366
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLA 494
+ +L + + H ITC++
Sbjct: 367 TLQWLCAETGNVLDTAEKAHEGDITCIS 394
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +3
Query: 246 DGKQLL-SCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINY 422
DG ++ SCS +W +T + + N ++N + G+ L + + + +
Sbjct: 207 DGSVVIASCSEGTDIVLWHGKTGRNLGHVDT-NQLKNHMAAVSPNGRFLAAAAFTADVKV 265
Query: 423 LDV----DNPDKP-KRV--LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
++ D K RV L GH +T L N + + TAS DG + WN++
Sbjct: 266 WEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEAR 578
L GH +T L +GK++ TA DG + + +D ++
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSK 121
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQL--LSCS 272
V +SPDG+L + I +Y S+L+ + AH G V ++++ KQ+ ++C
Sbjct: 415 VAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCG 474
Query: 273 GDKTCAIWDI 302
DK +WD+
Sbjct: 475 DDKLIKVWDL 484
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/135 (20%), Positives = 53/135 (39%)
Frame = +3
Query: 153 IFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
++L+D ++ + G V I+W+ DG L + +WD + +
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 333 MGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK 512
G+ E++ S W L + + G I DV +GH + + L +GK
Sbjct: 192 GGH--ESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK 249
Query: 513 TVYTASHDGCVTEWN 557
+ + +D V W+
Sbjct: 250 KLASGGNDNVVHIWD 264
Score = 36.7 bits (81), Expect = 0.014
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 10/171 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYD---GATSELKGEIGS-PAHKGGVYGISWSP 245
HT +++S G AS G D + ++D +++ + + H V ++W P
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 246 DGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI 416
LL+ G D W+ T G+ V S LW +S G
Sbjct: 295 FQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV----CSLLWSKSERELLSAHGFT 350
Query: 417 -NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
N L + P K L GH + +A +G TV +A+ D + WNV
Sbjct: 351 QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 35.9 bits (79), Expect = 0.025
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +3
Query: 63 CTKQEHTRFAQAVRYSPDGSL------FASAGFDGKIFLYD-GATSELKGEIGSPAHKGG 221
C H R + S GSL + G DGKI D S + G H
Sbjct: 181 CVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTY--VGHTEE 238
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWD 299
V G+ WS GK+L S D IWD
Sbjct: 239 VCGLKWSESGKKLASGGNDNVVHIWD 264
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/76 (36%), Positives = 36/76 (47%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V +SWS + LLS S DKT +WDIET LF + V Q + L +
Sbjct: 518 HLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPL-DEDYF 575
Query: 390 ISVSLSGVINYLDVDN 437
IS SL I ++ N
Sbjct: 576 ISGSLDAKIRIWNISN 591
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE 305
AH+GG++ + +SPD L S D +W+++
Sbjct: 409 AHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ 441
Score = 30.7 bits (66), Expect = 0.92
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDG 251
Q H +++SPD L ASAG D I +++ E+ ++G + I S G
Sbjct: 408 QAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMS-----MNEGSLTPIHPSMSG 462
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAV 347
S GD D + +T++ GN +
Sbjct: 463 STDKSSEGDAAEVSQDKKKKGKTSMSKKGNQI 494
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 38.7 bits (86), Expect = 0.003
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 5/174 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + S D L S +D ++ S+L+ AH+ V + DG
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVW--RVSDLRCVESVNAHEDAVNAVVSGFDGL- 266
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS----CLWQGKHLISVSLS-GVINY 422
+ + S D T +W E + T + Q + + Q L+ S G +N+
Sbjct: 267 VFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNF 326
Query: 423 LDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHV 584
+ +N K VL GH + CL GN +++ S D + W G HV
Sbjct: 327 WERENNMKNGGVLKGHKLAVLCLVAAGN--LMFSGSADLGIRVWRRPEGGGEHV 378
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/135 (20%), Positives = 54/135 (40%)
Frame = +3
Query: 153 IFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
++L+D ++ + KG V I+W+ DG L + +WD + ++
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLI 204
Query: 333 MGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGK 512
G+ E++ S W L + + G I DV +GH + + L +GK
Sbjct: 205 GGH--ESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESGK 262
Query: 513 TVYTASHDGCVTEWN 557
+ + + V W+
Sbjct: 263 KLASGGNYNVVHIWD 277
Score = 34.3 bits (75), Expect = 0.075
Identities = 44/172 (25%), Positives = 66/172 (38%), Gaps = 11/172 (6%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDG---ATSELKGEI--GSPAHKGGVYGISWS 242
HT +++S G AS G + ++D A+S+ + H V ++W
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 243 PDGKQLLSCSG---DKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
P LL+ G D W+ T G+ V S LW + +S G
Sbjct: 308 PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV----CSLLWSQRERELLSSHGF 363
Query: 414 I-NYLDV-DNPDKPKRV-LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
N L + P K L GH + +A NG TV +A+ D + WNV
Sbjct: 364 TQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 37.9 bits (84), Expect = 0.006
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = +3
Query: 258 LLSCSGDKTCAIWDIET--MQRTTLF-NMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
++S S D+TC +W + + + +F ++ NA+ C++ S G IN
Sbjct: 190 IISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAINATS 249
Query: 429 VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHV 584
+ + + K ITCLA +G + + S DG V W D RHV
Sbjct: 250 -EYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVW--DPKSLRHV 298
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYD-GATSELKGEI-GSPAHKG-GVYGISWSPDGKQLLS 266
A+ P G +F + D KI++ ATSE ++ GS + KG + +++ DG L+S
Sbjct: 221 ALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLIS 280
Query: 267 CSGDKTCAIWDIETMQ--RTTLFNMGN 341
S D +WD ++++ RT + G+
Sbjct: 281 GSEDGVVCVWDPKSLRHVRTLIHAKGS 307
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 375 QGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+G +L+ +SG I +V K+ GH + +TCL G+ + + S DG + W
Sbjct: 89 EGTYLVGGGISGDIYLWEVATGKLLKK-WHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Query: 555 NV 560
++
Sbjct: 148 SL 149
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.9 bits (84), Expect = 0.006
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Frame = +3
Query: 60 KCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKG-EIGSPAHKGGVYGIS 236
KCT H ++ S DGSL SA +D ++ TS+ K + AH + I
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIW--RTSDFKCLDSIEKAHDDAINAIV 242
Query: 237 WSPDGKQLLSCSGDKTCAIWDIETMQRT---TLFNMGNAVENQQVS----CLWQGKHLIS 395
S DG + + S DK +W+ + + + TL +AV +S L+ G S
Sbjct: 243 VSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRS 301
Query: 396 VSL-SGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEW 554
+ + +IN D + L GH K I CLA+ + V + S D + W
Sbjct: 302 ILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVW 353
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLL 647
H ++ LAL +G +Y+AS D W + + H + +N + +KDG +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 648 TIGID 662
T D
Sbjct: 251 TGSAD 255
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE 305
AH ++ ISW LL+ SGD+T +WD+E
Sbjct: 126 AHYNAIFDISWIKGDSCLLTASGDQTIKVWDVE 158
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASHDGCVTEWNVD 563
L++ S I DV+ +K VL+GH + + H N + + S DGC W++
Sbjct: 143 LLTASGDQTIKVWDVEE-NKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Query: 564 SGEARHVE 587
+ H E
Sbjct: 202 CKSSSHKE 209
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +3
Query: 66 TKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAH---KGGVYGIS 236
TK++ + ++ G+ ++ D +I+LY+ + KG + S +
Sbjct: 287 TKEKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTLRLD-KGPVQSFSGCRIDSFFVRTM 345
Query: 237 WSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVE 350
SPDG+ +LS S D IW + Q + G+ E
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFE 383
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 13/210 (6%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H R +RY+ +G L S D L+ E G H G V+ S D +
Sbjct: 9 HERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRG--HNGAVWCCDVSRDSSR 66
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS-----CLWQGKHLISVSLSGVINY 422
L++ S D+T +WD+++ + F + + + H + + + +
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKR 126
Query: 423 LDVDNPDK-PKRVLMGH----NKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE--ARH 581
+ D ++ + VL+ H K I +T+ + D + W+ ++G+ +
Sbjct: 127 IAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQS 186
Query: 582 VEGQGHGNQVNGM-RTTKDGSLLTIGIDDT 668
E GH + + + D LT +D T
Sbjct: 187 DEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 456 VLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKD 635
++ GH +P+T L + G +++ + D T W D+GE R +GH V ++D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGE-RLGTYRGHNGAVWCCDVSRD 63
Query: 636 GSLLTIGIDD 665
S L G D
Sbjct: 64 SSRLITGSAD 73
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 84 RFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGKQL 260
R +AV + P S G D I ++D T +L K HK + + + D
Sbjct: 150 RINRAV-WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 261 LSCSGDKTCAIWDIETM 311
L+ S DKT +WD+ T+
Sbjct: 209 LTGSLDKTAKLWDMRTL 225
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 13/210 (6%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H R +RY+ +G L S D L+ E G H G V+ S D +
Sbjct: 9 HERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRG--HNGAVWCCDVSRDSSR 66
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS-----CLWQGKHLISVSLSGVINY 422
L++ S D+T +WD+++ + F + + + H + + + +
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKR 126
Query: 423 LDVDNPDK-PKRVLMGH----NKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE--ARH 581
+ D ++ + VL+ H K I +T+ + D + W+ ++G+ +
Sbjct: 127 IAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQS 186
Query: 582 VEGQGHGNQVNGM-RTTKDGSLLTIGIDDT 668
E GH + + + D LT +D T
Sbjct: 187 DEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 456 VLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKD 635
++ GH +P+T L + G +++ + D T W D+GE R +GH V ++D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGE-RLGTYRGHNGAVWCCDVSRD 63
Query: 636 GSLLTIGIDD 665
S L G D
Sbjct: 64 SSRLITGSAD 73
Score = 35.9 bits (79), Expect = 0.025
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 12/173 (6%)
Frame = +3
Query: 84 RFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGKQL 260
R +AV + P S G D I ++D T +L K HK + + + D
Sbjct: 150 RINRAV-WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 261 LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS------CLWQGKHLISVSLSG-VIN 419
L+ S DKT +WD+ T+ + V +S L G+ +V+ +
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAG 268
Query: 420 YLDVDNPDKPKRV----LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ DK + + GH PI LA + +GK+ + DG V + DS
Sbjct: 269 KFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDS 321
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 13/210 (6%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H R +RY+ +G L S D L+ E G H G V+ S D +
Sbjct: 9 HERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRG--HNGAVWCCDVSRDSSR 66
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS-----CLWQGKHLISVSLSGVINY 422
L++ S D+T +WD+++ + F + + + H + + + +
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKR 126
Query: 423 LDVDNPDK-PKRVLMGH----NKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE--ARH 581
+ D ++ + VL+ H K I +T+ + D + W+ ++G+ +
Sbjct: 127 IAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQS 186
Query: 582 VEGQGHGNQVNGM-RTTKDGSLLTIGIDDT 668
E GH + + + D LT +D T
Sbjct: 187 DEEVGHKKDITSLCKAADDSHFLTGSLDKT 216
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 456 VLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKD 635
++ GH +P+T L + G +++ + D T W D+GE R +GH V ++D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGE-RLGTYRGHNGAVWCCDVSRD 63
Query: 636 GSLLTIGIDD 665
S L G D
Sbjct: 64 SSRLITGSAD 73
Score = 35.9 bits (79), Expect = 0.025
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 12/173 (6%)
Frame = +3
Query: 84 RFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL-KGEIGSPAHKGGVYGISWSPDGKQL 260
R +AV + P S G D I ++D T +L K HK + + + D
Sbjct: 150 RINRAV-WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 261 LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVS------CLWQGKHLISVSLSG-VIN 419
L+ S DKT +WD+ T+ + V +S L G+ +V+ +
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAG 268
Query: 420 YLDVDNPDKPKRV----LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ DK + + GH PI LA + +GK+ + DG V + DS
Sbjct: 269 KFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDS 321
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 37.5 bits (83), Expect = 0.008
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 7/157 (4%)
Frame = +3
Query: 129 ASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE 305
A+A DG + +Y + S+ S P G ++WS D +++ S S D WD
Sbjct: 169 AAACDDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDAN 228
Query: 306 TMQRTTLFNMG-NAVENQQVSCLW-----QGKHLISVSLSGVINYLDVDNPDKPKRVLMG 467
+G + N C+W + L+S +G + + D + +
Sbjct: 229 LCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQH-GTLLQAHSN 287
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEAR 578
H + LA + V++A DG V + + G +R
Sbjct: 288 HKGDVNALAASPSHNRVFSAGADGQVILYKLSGGTSR 324
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKG--GVYGISWSPDGKQLLSC 269
A+ +SP G ASA +D F ++ G+P +G G+ + WSP G +
Sbjct: 217 ALSWSPCGRYLASASYDSSSF----TIWDVSQGAGTPIRRGLGGISMLKWSPTGDYFFAA 272
Query: 270 SGDKTCAIWDIET 308
D T +W+ T
Sbjct: 273 RFDGTFCLWETNT 285
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL-FNMGNAVENQQVSC-LWQG 380
AH G V G+ + DG LLS +WDIE+ + T + F G ++ +
Sbjct: 310 AHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDD 369
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
L+ V + + + + +L GH + + + N + +YT+ D + W+
Sbjct: 370 PALVFVPCMKTVKGFGMWS-GRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 6 NRLRDNTIAVFEGPPFKFKCTKQ-EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE 182
N R +I ++ ++ + +K + A S DG L A +G + + D +T
Sbjct: 249 NTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIID-STKM 307
Query: 183 LKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
+I AH G V +++SPD + L+S S D
Sbjct: 308 QTNQIVKKAHLGLVTALTFSPDSRCLVSVSFD 339
Score = 27.5 bits (58), Expect = 8.6
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 6/178 (3%)
Frame = +3
Query: 141 FDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRT 320
FD + + D E + + G +S++ DG L + + D T +++ +M +T
Sbjct: 118 FDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSM-KT 176
Query: 321 TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPI-TC-LA 494
L + ++ GK L+S+ + + DV+ + ++ +C +
Sbjct: 177 LLNESKTHASVKSLTFSESGKFLVSLG-APLCRVWDVNASAAIASLSKEKDEMFASCRFS 235
Query: 495 LHGNGKTV-YTASHD---GCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ +G V Y A++ G + W+ S R + N ++ + DG LL +G
Sbjct: 236 VDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVG 293
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 6 NRLRDNTIAVFEGPPFKFKCTKQ-EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE 182
N R +I ++ ++ + +K + A S DG L A +G + + D +T
Sbjct: 249 NTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIID-STKM 307
Query: 183 LKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
+I AH G V +++SPD + L+S S D
Sbjct: 308 QTNQIVKKAHLGLVTALTFSPDSRCLVSVSFD 339
Score = 27.5 bits (58), Expect = 8.6
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 6/178 (3%)
Frame = +3
Query: 141 FDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRT 320
FD + + D E + + G +S++ DG L + + D T +++ +M +T
Sbjct: 118 FDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSM-KT 176
Query: 321 TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPI-TC-LA 494
L + ++ GK L+S+ + + DV+ + ++ +C +
Sbjct: 177 LLNESKTHASVKSLTFSESGKFLVSLG-APLCRVWDVNASAAIASLSKEKDEMFASCRFS 235
Query: 495 LHGNGKTV-YTASHD---GCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIG 656
+ +G V Y A++ G + W+ S R + N ++ + DG LL +G
Sbjct: 236 VDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVG 293
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H G + ISWS + + LLS S D + +W I +F+ N V + Q + + H
Sbjct: 355 HSGDILDISWSKNNR-LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPV-DDDHF 412
Query: 390 ISVSLSGVI 416
IS S+ G +
Sbjct: 413 ISGSIDGKV 421
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQR 317
AH+G + + +SPDG+ L S D +W + +R
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE 182
Q H A+++SPDG ASAG DG + ++ E
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H G + ISWS + + LLS S D + +W I +F+ N V + Q + + H
Sbjct: 355 HSGDILDISWSKNNR-LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPV-DDDHF 412
Query: 390 ISVSLSGVI 416
IS S+ G +
Sbjct: 413 ISGSIDGKV 421
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQR 317
AH+G + + +SPDG+ L S D +W + +R
Sbjct: 249 AHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSE 182
Q H A+++SPDG ASAG DG + ++ E
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 36.7 bits (81), Expect = 0.014
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 5/168 (2%)
Frame = +3
Query: 75 EHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
+H + + + L SA +D I ++ A S+ I PAH V + + +
Sbjct: 204 KHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI--PAHDDAVNSVVSTTEAI 261
Query: 255 QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQ--VSCLWQGKHLISV---SLSGVIN 419
+ S S D T W + + T + + Q+ V+ L K+ +V S G++N
Sbjct: 262 -VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVN 320
Query: 420 YLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
+ + + +L GH + CL + G+ V++ S D + W D
Sbjct: 321 FWEREKQLNYGGILKGHKLAVLCLEVAGS--LVFSGSADKTICVWKRD 366
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVNGMRTTKDGSL 644
H ++CL+L+ +Y+AS D + W + +++ +E H + VN + +T + +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRI--ADSKCLESIPAHDDAVNSVVSTTEAIV 262
Query: 645 LTIGIDDTL 671
+ D T+
Sbjct: 263 FSGSADGTV 271
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 36.7 bits (81), Expect = 0.014
Identities = 26/100 (26%), Positives = 43/100 (43%)
Frame = +3
Query: 6 NRLRDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSEL 185
N R +I + +K K +K A S DG L A +G + + + +
Sbjct: 260 NTERGGSIITCDTKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTLEGDVLILESTRMQT 319
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIE 305
++ AH G V +++SPD + L+S S D + IE
Sbjct: 320 I-QVVKKAHLGLVTALTFSPDSRGLVSVSFDSRARLTMIE 358
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 36.7 bits (81), Expect = 0.014
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKH 386
H+ V + +S Q+++ S DKT WD T +G ++ ++V+ L G
Sbjct: 96 HEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSLVGNR 155
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPIT-CLALHGNGKTVYTASHDGCVTEWNVD 563
L+ + +N D+ N +P++ K T C+ + NG +S +G V+ D
Sbjct: 156 LVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVSMEFFD 215
Query: 564 SGEA 575
EA
Sbjct: 216 LSEA 219
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDGKQL--LSC 269
V +SPDG+ A I LY ++L+ AH G V ++++ +QL ++C
Sbjct: 413 VAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLCVITC 472
Query: 270 SGDKTCAIWDIETMQRTT 323
DK +WD+ + T
Sbjct: 473 GDDKLIKVWDVSGRKHFT 490
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/116 (22%), Positives = 55/116 (47%)
Frame = +3
Query: 231 ISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSG 410
I+ S + ++S +G K +++++ T + T F M + ++ Q ++I++ +
Sbjct: 826 IALSKNDSYVMSAAGGKV-SLFNMMTFKVMTTF-MPPPPASTFLAFHPQDNNVIAIGMED 883
Query: 411 VINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEAR 578
++ D+ K L GH K IT LA + ++ D + W++D+ E R
Sbjct: 884 STIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKR 939
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 36.3 bits (80), Expect = 0.019
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 5/176 (2%)
Frame = +3
Query: 69 KQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPD 248
K +H ++ + L S+ +D I ++ A S+ I AH + + D
Sbjct: 231 KTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIH--AHDDAINSVMSGFD 288
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQ--VSCLW---QGKHLISVSLSGV 413
+ + S D T +W E + T + + Q+ V+ L Q + S G+
Sbjct: 289 DL-VFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGL 347
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
+NY + +L GH + CL + GN + + S D + W D + H
Sbjct: 348 VNYWERSKRSFTGGILKGHKSAVLCLGIAGN--LLLSGSADKNICVWRRDPSDKSH 401
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAI 293
DG + A+AG+D +I +Y+ + H+ +S+SPD + + S S D T A+
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAIL--KYHRATCNAVSYSPDCELMASASEDATVAL 376
Query: 294 WDI 302
W +
Sbjct: 377 WKL 379
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNG 617
P P VL GH + ++ H + ++T S DG + W D+ + R V ++ NG
Sbjct: 6 PPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIW--DTIQHRAVSSAWAHSRANG 63
Query: 618 M 620
+
Sbjct: 64 V 64
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 36.3 bits (80), Expect = 0.019
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 10/162 (6%)
Frame = +3
Query: 84 RFAQAVR---YSPDGSLFASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDG 251
RFA+++ +SPD S+ A + ++ +Y + + + H V GI WS
Sbjct: 8 RFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS 67
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKHLISVSLSG-----V 413
++++ S D+ +W +E + + N+ C+ W K SG +
Sbjct: 68 NKIVTVSHDRNSYVWSLEGAEWVPTLVILRL--NRAALCVQWSPKENKFAVGSGAKTVCI 125
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG 539
Y +N K + H +T +A H N + T S DG
Sbjct: 126 CYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDG 167
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 36.3 bits (80), Expect = 0.019
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 10/162 (6%)
Frame = +3
Query: 84 RFAQAVR---YSPDGSLFASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDG 251
RFA+++ +SPD S+ A + ++ +Y + + + H V GI WS
Sbjct: 8 RFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS 67
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKHLISVSLSG-----V 413
++++ S D+ +W +E + + N+ C+ W K SG +
Sbjct: 68 NKIVTVSHDRNSYVWSLEGAEWVPTLVILRL--NRAALCVQWSPKENKFAVGSGAKTVCI 125
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG 539
Y +N K + H +T +A H N + T S DG
Sbjct: 126 CYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDG 167
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 36.3 bits (80), Expect = 0.019
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 10/162 (6%)
Frame = +3
Query: 84 RFAQAVR---YSPDGSLFASAGFDGKIFLYDGATSELKGEIGS-PAHKGGVYGISWSPDG 251
RFA+++ +SPD S+ A + ++ +Y + + + H V GI WS
Sbjct: 8 RFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS 67
Query: 252 KQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKHLISVSLSG-----V 413
++++ S D+ +W +E + + N+ C+ W K SG +
Sbjct: 68 NKIVTVSHDRNSYVWSLEGAEWVPTLVILRL--NRAALCVQWSPKENKFAVGSGAKTVCI 125
Query: 414 INYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG 539
Y +N K + H +T +A H N + T S DG
Sbjct: 126 CYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDG 167
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNM 335
AH G + + +SPDGK + S D +W I +RT + +
Sbjct: 216 AHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEV 258
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNM 335
AH G + + +SPDGK + S D +W I +RT + +
Sbjct: 216 AHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEV 258
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKH 386
HK V+ ++W+ +G +L S S D+T IW+IE + ++ V L W KH
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKH 78
Score = 34.3 bits (75), Expect = 0.075
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 1/162 (0%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGS-LFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
HT + + P S L A+A D + L+D + + ++ G I++ PDG
Sbjct: 65 HTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVEL---SGENINITYKPDGT 121
Query: 255 QLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVD 434
+ + D I D+ + L E +++ G + G + L
Sbjct: 122 HVAVGNRDDELTILDVRKFK--PLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYP 179
Query: 435 NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+ KP L H C+A+ G+ S D V+ W++
Sbjct: 180 SL-KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDI 220
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD---SGEARHVEGQGHGNQVN 614
R GH K + +A + NG + + S D WN++ +A+ +E +GH + V+
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVD 70
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETM 311
AH G Y I+ P G+ S D ++WDI M
Sbjct: 189 AHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDM 223
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 35.9 bits (79), Expect = 0.025
Identities = 31/118 (26%), Positives = 49/118 (41%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H + +SWS + LLS S DKT +WDIET LF + V Q S + +
Sbjct: 505 HLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPV-DENYF 562
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
+S SL I + D+ ++ +T +G+ SH G ++ +
Sbjct: 563 LSGSLDAKIRIWSIQ--DRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTE 618
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
AH+G V+ I +S D L S D+ +W+++ + ++ N G+ C G
Sbjct: 402 AHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSM-NEGSLTPIHPSLCDSSGNE 460
Query: 387 LISV 398
+ V
Sbjct: 461 ITVV 464
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG-CVTEWNVDSGEARHVEGQGH- 599
D+ D P +L GH+ ITCL + + V + S DG CV E R++ H
Sbjct: 1096 DIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFH---TLREGRYIRSLKHP 1152
Query: 600 -GNQVNGMRTTKDGSLLTIGIDD 665
G+ V+ + + G ++ G DD
Sbjct: 1153 SGSAVSKLAASHHGRIVLYGDDD 1175
Score = 29.1 bits (62), Expect = 2.8
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 7/162 (4%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPD-----GKQL 260
A +SP L+ + + G T +K + + H GG + S + D G +
Sbjct: 927 ATTHSPSAVLYVGVVDSNIVLVNQGLTLSVKIWLTTQLHSGGNFTFSSAQDPFFGVGSDV 986
Query: 261 LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSC-LWQGK-HLISVSLSGVINYLDVD 434
LS + ++E + M +EN VSC W+ H+IS++ V+
Sbjct: 987 LSPRNIGSPLADNVE-LGSQCFAAMQMPLENFLVSCGNWENSFHVISLTDGRVV------ 1039
Query: 435 NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+ + H ++C+A+ + + T S+D V W++
Sbjct: 1040 ------QSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/106 (26%), Positives = 47/106 (44%)
Frame = +3
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
G L S SG K A++D++ ++ F G+ G L++V L ++
Sbjct: 441 GSYLFSTSGGKI-AVFDLKNFEKVASF--GSPTPMATYFIFIPGD-LLAVGLDDGSIFIH 496
Query: 429 VDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ K K L GH++ ITCLA + ++ DG + W+ S
Sbjct: 497 CLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 159 LYDGATSELKGEIGS-PAHKGGVYGISWSP---DGKQLLSCSGDKTCAIWDIETMQ 314
L D T+E K + PAH GGV + S QL++ DKT AIWD T +
Sbjct: 185 LPDLVTAEAKAPLFLVPAHDGGVVAVELSRVSGSAPQLITIGADKTLAIWDTMTFK 240
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +3
Query: 69 KQEHTRFAQAVRYSP-DGSLFASAGFDGKIFLYDGATSELKGEIGSP-----AHKGGVYG 230
++ H V ++P D +L + D + L+D G +GSP HK V
Sbjct: 333 EKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANG-VGSPIYKFEGHKAAVLC 391
Query: 231 ISWSPDGKQLLSCSG-DKTCAIWDIETMQR 317
+ WSPD + S D IWD + + +
Sbjct: 392 VQWSPDKSSVFGSSAEDGLLNIWDYDRVSK 421
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAI-WDIETMQRTTLFNMGNAVENQQVSCLWQGKH 386
H+ V +++SP Q GD +C I WD T T + + C+ H
Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDART--GTNPVTKVEKAHDADLHCVDWNPH 348
Query: 387 ----LISVSLSGVINYLD-----VDNPDKPKRVLMGHNKPITCLALHGNGKTVY-TASHD 536
+++ S + D + P GH + C+ + +V+ +++ D
Sbjct: 349 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAED 408
Query: 537 GCVTEWNVD 563
G + W+ D
Sbjct: 409 GLLNIWDYD 417
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 34.7 bits (76), Expect = 0.057
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET-MQRTTLFNMGNAVENQQVSCLWQGKH 386
H+G V ++ DG L+C D+T +W+ + T + G V + V+
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTS--DNAK 74
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
S + Y DV + + R GH+ + + + + V +A D + W+ S
Sbjct: 75 FCSCGGDRQVYYWDV-STGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Query: 567 GEARHVE 587
V+
Sbjct: 134 HSVEPVQ 140
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +3
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNG 617
P K +L GH + +G+G T D + WN G + HG +V
Sbjct: 7 PTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTY-KSHGREVRD 65
Query: 618 MRTTKDGS 641
+ T D +
Sbjct: 66 VHVTSDNA 73
Score = 31.5 bits (68), Expect = 0.53
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H A R++ DG+ + G D I L++ L S H V + + D +
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKS--HGREVRDVHVTSDNAK 74
Query: 258 LLSCSGDKTCAIWDIET 308
SC GD+ WD+ T
Sbjct: 75 FCSCGGDRQVYYWDVST 91
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKH 386
HK VY ++ + G L+S +K +WD T ++ + +N +V L G+
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS--MKLRGHTDNVRVLLLDSTGRF 269
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCV 545
+S S +I D+ + H + LA + + VY+ D C+
Sbjct: 270 CLSGSSDSMIRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCL 321
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL-WQGKH 386
HK VY ++ + G L+S +K +WD T ++ + +N +V L G+
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKS--MKLRGHTDNVRVLLLDSTGRF 269
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCV 545
+S S +I D+ + H + LA + + VY+ D C+
Sbjct: 270 CLSGSSDSMIRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCL 321
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 34.3 bits (75), Expect = 0.075
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQG 596
L GH K +T +AL +YTAS D V W+ SG+ V G
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLG 185
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H+ V GI+ +L + S D+T IWD + Q T + N+G +V C+
Sbjct: 143 HQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGG-----EVGCIISEGPW 197
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPI-TCLALHGNGKTVYTASHDGCVTEWNVDS 566
+ V + ++ ++ N + N P+ +L ++ + DG + W +S
Sbjct: 198 LLVGMPNLVKAWNIQN-----NADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNS 252
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 90 AQAVRYSPDGSLFASAGFDGKIFLYD-GATSELKGEIGSPAHKGGVYGISWSPDGKQLLS 266
A + + P +L A+ DG + LY + S L E AHK + + DG+++++
Sbjct: 9 AFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVT 68
Query: 267 CSGDKTCAIWDIET 308
S D + D+ET
Sbjct: 69 ASADCSILATDVET 82
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
LI+ +G+I+ + + P++ + + H+ PI LAL + K + + +HD + WN++
Sbjct: 235 LITGCDNGIISLVGI-LPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLE 292
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 34.3 bits (75), Expect = 0.075
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 105 YSPDGSLF----ASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCS 272
+ DG+L AS+GFD ++D T+ + + H V + +SP+G L S
Sbjct: 134 WKTDGTLLQTFKASSGFDSLARVWDLRTA--RNILIFQGHIKQVLSVDFSPNGYHLASGG 191
Query: 273 GDKTCAIWDI 302
D C IWD+
Sbjct: 192 EDNQCRIWDL 201
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASHDGCVTEW 554
GK L++ SLSGV +V VL GH + +T + + + + TAS D W
Sbjct: 75 GKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIW 134
Query: 555 NVD 563
D
Sbjct: 135 KTD 137
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGM--RTTKDG 638
G ++P+T +L +GK + T S G W V + V +GH V + + D
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDE 120
Query: 639 SLLTIGIDDT 668
L T D T
Sbjct: 121 CLATASTDRT 130
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 26.6 bits (56), Expect(2) = 0.086
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQG 380
H ++ S DG+ L + D +WDI T + + + N V C + G
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTG 261
Score = 26.2 bits (55), Expect(2) = 0.086
Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVNGMRTTKDGS 641
GH ++ L +++ S+DG ++ WN + ++E GH +++ +
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAE--HRTYIESCFGHQSELLSIDALGRER 318
Query: 642 LLTIGIDDTL 671
+L++G D T+
Sbjct: 319 VLSVGRDRTM 328
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.9 bits (74), Expect = 0.099
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H G V ISWS D LLS S DKT +W + + +F + V + Q + + +
Sbjct: 327 HTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPV-NENYF 384
Query: 390 ISVSLSGVINYLDV 431
+S S+ G + ++
Sbjct: 385 MSGSIDGKVRIWNI 398
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTL 326
AH G + + +S DGK L S D +W + +++ L
Sbjct: 219 AHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRL 258
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 171 ATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW 296
+T + + + + AH V G++WS DG+ L SCS D W
Sbjct: 422 STRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSW 463
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 33.9 bits (74), Expect = 0.099
Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 8/194 (4%)
Frame = +3
Query: 78 HTRFAQAVRYSP-DGSLFASAGFDGKIFLYDGATSELKGE-IGSPAHKGGVYGISWSPDG 251
H A+ +SP S I L++ A+ + I H V + WSP
Sbjct: 222 HKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAE 281
Query: 252 KQLL-SCSGDKTCAIWDIETMQRTTL-FNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
+ + SCS D + A+WDI + L F NA N L S S G +
Sbjct: 282 ENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIR 341
Query: 426 D---VDNPDKPKRVLMGHNKPITCLALHGN-GKTVYTASHDGCVTEWNVDSGEARHVEGQ 593
D + D H PIT + + T+ S D +T W++ + E +
Sbjct: 342 DLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAE 401
Query: 594 GHGNQVNGMRTTKD 635
+ + T +D
Sbjct: 402 FNAQTKELVNTPQD 415
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 33.9 bits (74), Expect = 0.099
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
L GH+ ++C+ + +G+ V TA+HDG V W+V
Sbjct: 935 LKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDV 967
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQR 317
AHKG ++ I +S DG+ L S D IW + +R
Sbjct: 361 AHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESER 397
Score = 32.3 bits (70), Expect = 0.30
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Frame = +3
Query: 78 HTRFAQAVRYSP-DGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
H+ + ++++P D + F S D K+ ++ ++ + H+ V ++PDG+
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVD--WNDLHEM-VTAACYTPDGQ 563
Query: 255 QLLSCSGDKTCAIWDIET--MQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
L S TC +++ +Q+ N+ N + + + + S ++ D
Sbjct: 564 GALVGSYKGTCCLYNTHDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSAD 623
Query: 429 -----VDNPDKPKRV--LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
VD D + N I+ +L NGK + +AS D V WN DS
Sbjct: 624 SRTRVVDGVDLVHKFKGFRNTNSQISA-SLTSNGKFLVSASEDSNVYVWNYDS 675
Score = 31.5 bits (68), Expect = 0.53
Identities = 28/116 (24%), Positives = 48/116 (41%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V +SWS + LLS S DKT +WD+ + +F+ + V Q + + +
Sbjct: 467 HLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPV-DDNYF 524
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
IS SL + + PD ++ +T +G+ S+ G +N
Sbjct: 525 ISGSLDAKVRIWSI--PDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYN 578
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
Q H ++++S DG ASAG D I ++ SE KGE+
Sbjct: 360 QAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGEL 401
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 90 AQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG-SPAHKGGVYGISWSPDGKQLLS 266
A V++S DG L DG I + D L P ++SP+G ++S
Sbjct: 208 ANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVS 267
Query: 267 CSGDKTCAIWDIET 308
SGD + W + +
Sbjct: 268 GSGDGSTHAWGVRS 281
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 90 AQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIG-SPAHKGGVYGISWSPDGKQLLS 266
A V++S DG L DG I + D L P ++SP+G ++S
Sbjct: 205 ANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVS 264
Query: 267 CSGDKTCAIWDIET 308
SGD + W + +
Sbjct: 265 GSGDGSTHAWGVRS 278
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
L GHNK + +AL +++ S DG + W+ +SG+ H
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVH 167
Score = 32.3 bits (70), Expect = 0.30
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLY----DGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDK 281
+G LFA G I ++ D + K H G V ++ G+ L S S DK
Sbjct: 222 NGMLFAGTS-SGSILVWKATTDSESDPFKYLTSLEGHSGEV--TCFAVGGQMLYSGSVDK 278
Query: 282 TCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI 416
T +WD+ T+Q S L K LIS SL G I
Sbjct: 279 TIKMWDLNTLQCIMTLKQHTGT---VTSLLCWDKCLISSSLDGTI 320
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 435 NPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDS 566
+P K L GH+ +TC A+ G+ +Y+ S D + W++++
Sbjct: 246 DPFKYLTSLEGHSGEVTCFAV--GGQMLYSGSVDKTIKMWDLNT 287
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.1 bits (72), Expect = 0.17
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = +3
Query: 114 DGSLFASAGFDGKIFLYDGATSE---LKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKT 284
+G LFA G I ++ SE K H G + G+ L S S DKT
Sbjct: 276 NGMLFAGTS-SGSILVWKATDSESDPFKYLTSLEGHHSGEV-TCFVVGGEVLYSGSVDKT 333
Query: 285 CAIWDIETMQ-RTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVI 416
+WD+ T+Q R TL V S L K LIS SL G I
Sbjct: 334 IKVWDLNTLQCRMTLKQHIGTV----TSLLCWDKCLISSSLDGTI 374
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNM 335
HK + GI+ +L S SGD T IWD + Q N+
Sbjct: 186 HKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINL 227
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
L GH I +AL +++ S DG + W+ +SG+
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQ 220
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 33.1 bits (72), Expect = 0.17
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +3
Query: 63 CTKQEHTRFAQAVRYSPDGSLFASAGFD-GKIFLYDGATSELKGEIGS-PAHKGGVYGIS 236
C+ T+ SP + +AGF G+ L+D + G I S AH G V +
Sbjct: 408 CSGGSQTKHGDGASVSPS---WIAAGFSSGQCRLFDLREN---GFISSWRAHDGYVTKLV 461
Query: 237 WSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
+P+ L+S S DKT IWD+ F + + +W GK +IS+S + +
Sbjct: 462 -APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIW-GKDVISISRNNI 518
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 TRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQL 260
T+ ++ SPDG + +A K F S+LK H G V ++++ DGK +
Sbjct: 158 TKTVSSLCVSPDGKILVTASTQLKTF----NCSDLKKIQKFTGHPGVVRCVAFTEDGKYV 213
Query: 261 LSCS-GDKTCAIW 296
LS + G++ A+W
Sbjct: 214 LSSAVGERYIAVW 226
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 33.1 bits (72), Expect = 0.17
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 12/164 (7%)
Frame = +3
Query: 144 DGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTT 323
D ++ + L E H+G V ++W+ +G L+S S D IW+ + +
Sbjct: 27 DQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLH 86
Query: 324 LFNMGNA--------VENQQVSCLWQGKHLISVSL---SGVINYLDVDNPDKPKRVLMGH 470
+ G+ V + G V L S + + DN P + H
Sbjct: 87 SIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCH 146
Query: 471 NKPITCLALH-GNGKTVYTASHDGCVTEWNVDSGEARHVEGQGH 599
+ + LA+ GN V++AS DG + + + + G H
Sbjct: 147 TRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRESTSCPPAGTAH 190
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2
Query: 628 VVLMPLTWFP*PWPST*RASPESTFHSVTQ 539
+VL PL FP PWPST S FH V +
Sbjct: 1470 IVLAPLGLFPRPWPSTADISEGGQFHKVIE 1499
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2
Query: 628 VVLMPLTWFP*PWPST*RASPESTFHSVTQ 539
+VL PL FP PWPST S FH V +
Sbjct: 1561 IVLAPLGLFPRPWPSTADISEGGQFHKVIE 1590
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSL-FASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGK 254
H + V + P + F S G D + L+D T AH ++ + W+P
Sbjct: 280 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDN 339
Query: 255 QL-LSCSGDKTCAIWD 299
L L+ S D T ++D
Sbjct: 340 NLILTGSADNTVRVFD 355
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Frame = +3
Query: 69 KQEHTRFAQAVRYSP-DGSLFASAGFDGKIFLYDGATSELKGEIGSPA-----HKGGVYG 230
++ H V ++P D +L + D + ++D G +GSP H+ V
Sbjct: 322 EKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNG-VGSPVYKFEGHRAAVLC 380
Query: 231 ISWSPDGKQLLSCSG-DKTCAIWDIE 305
+ WSPD + S D IWD +
Sbjct: 381 VQWSPDKSSVFGSSAEDGLLNIWDCD 406
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 210 HKGGVYGISWSP-DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGN 341
H+ GV + W P D LL+C+ D WD T + GN
Sbjct: 262 HQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGN 306
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 210 HKGGVYGISWSP-DGKQLLSCSGDKTCAIWDIETMQRTTLFNMGN 341
H+ GV + W P D LL+C+ D WD T + GN
Sbjct: 262 HQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGN 306
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/117 (23%), Positives = 47/117 (40%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H+G V G+ + +S D +W+ +T R +G+ + V + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKT-HRCLFTLLGHLDYIRTVQFHHENPWI 108
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+S S I + + VL GHN + C + H V +AS D V W++
Sbjct: 109 VSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 30.7 bits (66), Expect = 0.92
Identities = 34/182 (18%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + + V++ + SA D I +++ + + H V S+ P
Sbjct: 92 HLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL--TGHNHYVMCASFHPKEDL 149
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
++S S D+T +WDI +++ + + + Q++ G + ++ Y
Sbjct: 150 VVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFG------GVDAIVKY----- 198
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVN 614
VL GH++ + + H + + + D V W ++ +A V+ +GH N V+
Sbjct: 199 ------VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 615 GM 620
+
Sbjct: 253 SV 254
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 33.1 bits (72), Expect = 0.17
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 1/182 (0%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ 257
H + + V++ + SA D I +++ + + H V S+ P
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL--TGHNHYVMCASFHPKEDL 149
Query: 258 LLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDN 437
++S S D+T +WDI +++ T+ + + Q++ G + ++ Y
Sbjct: 150 VVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFG------GVDAIVKY----- 198
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVN 614
VL GH++ + A H + + + D V W ++ +A V+ +GH N V+
Sbjct: 199 ------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 615 GM 620
+
Sbjct: 253 SV 254
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/117 (22%), Positives = 46/117 (39%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H+G V G+ + +S D +W+ + R +G+ + V + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKN-HRCLFTLLGHLDYIRTVQFHHEYPWI 108
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+S S I + + VL GHN + C + H V +AS D V W++
Sbjct: 109 VSASDDQTIRIWNWQSRTCVS-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 210 HKGGVYGISWSP---DGKQLLSCSGDKTCAIWDIETMQ 314
H G V I++SP QLLS S D TC IWD Q
Sbjct: 328 HTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQ 365
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDG 638
L GH + C L +G+ V T S D V W++D+ +GH + + + +
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCL-ASCRGHEGDITDLAVSSNN 299
Query: 639 SLLTIGIDD 665
+ +D
Sbjct: 300 IFIASASND 308
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 32.7 bits (71), Expect = 0.23
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V + +S Q+++ S DKT WD +G ++ ++V + H
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHR 156
Query: 390 ISVSLSG-VINYLDVDNPDKPKRVLMGHNKPIT-CLALHGNGKTVYTASHDGCVTEWNVD 563
+ V+ +G +N D+ N +P++ K T C+ + NG +S +G V D
Sbjct: 157 LVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFD 216
Query: 564 SGEA 575
EA
Sbjct: 217 LSEA 220
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/130 (21%), Positives = 56/130 (43%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVS 401
V + P +L+ T IW+ +T T F + + + + + + +++ +
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEV-TELPVRSAKFIPRKQWVVAGA 76
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
I + + DK K V H+ I C+A+H V ++S D + W+ ++G A
Sbjct: 77 DDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACT 135
Query: 582 VEGQGHGNQV 611
+GH + V
Sbjct: 136 QIFEGHSHYV 145
Score = 27.5 bits (58), Expect = 8.6
Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 2/200 (1%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-D 248
+ H+ + + V P S+ D I L+D +I H V + ++P D
Sbjct: 96 EAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE-GHSHYVMQVVFNPKD 154
Query: 249 GKQLLSCSGDKTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
S S D+T IW++ + TL V +LI+ S
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN 605
D + L GH ++ + H + T S DG V W+ + + G
Sbjct: 215 DYQTKSCVQ-TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL-E 272
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
+V + K + IG D+
Sbjct: 273 RVWAIGYIKSSRRVVIGYDE 292
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/130 (21%), Positives = 56/130 (43%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVS 401
V + P +L+ T IW+ +T T F + + + + + + +++ +
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEV-TELPVRSAKFIPRKQWVVAGA 76
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
I + + DK K V H+ I C+A+H V ++S D + W+ ++G A
Sbjct: 77 DDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACT 135
Query: 582 VEGQGHGNQV 611
+GH + V
Sbjct: 136 QIFEGHSHYV 145
Score = 27.5 bits (58), Expect = 8.6
Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 2/200 (1%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-D 248
+ H+ + + V P S+ D I L+D +I H V + ++P D
Sbjct: 96 EAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE-GHSHYVMQVVFNPKD 154
Query: 249 GKQLLSCSGDKTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
S S D+T IW++ + TL V +LI+ S
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN 605
D + L GH ++ + H + T S DG V W+ + + G
Sbjct: 215 DYQTKSCVQ-TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL-E 272
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
+V + K + IG D+
Sbjct: 273 RVWAIGYIKSSRRVVIGYDE 292
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/130 (21%), Positives = 56/130 (43%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVS 401
V + P +L+ T IW+ +T T F + + + + + + +++ +
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEV-TELPVRSAKFIPRKQWVVAGA 76
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
I + + DK K V H+ I C+A+H V ++S D + W+ ++G A
Sbjct: 77 DDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACT 135
Query: 582 VEGQGHGNQV 611
+GH + V
Sbjct: 136 QIFEGHSHYV 145
Score = 27.5 bits (58), Expect = 8.6
Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 2/200 (1%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-D 248
+ H+ + + V P S+ D I L+D +I H V + ++P D
Sbjct: 96 EAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE-GHSHYVMQVVFNPKD 154
Query: 249 GKQLLSCSGDKTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
S S D+T IW++ + TL V +LI+ S
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN 605
D + L GH ++ + H + T S DG V W+ + + G
Sbjct: 215 DYQTKSCVQ-TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL-E 272
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
+V + K + IG D+
Sbjct: 273 RVWAIGYIKSSRRVVIGYDE 292
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 DNTIAV--FEGPPFKFKC--TKQEHTRFAQAVRYSPD----GSLFASAGFDGKIFLYD-G 170
D+T+ V F +K C +HT + + V ++P+ S AS DGK+ ++ G
Sbjct: 185 DSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIG 244
Query: 171 ATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW 296
E K V+ +SWS G L G+ +W
Sbjct: 245 KEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 GSLFASAGFDGKIFLY-DGATSELKGEIGSPAHKGGVYGISWSP 245
GSL AS +DG+I L+ +G ++ HK V I+W+P
Sbjct: 70 GSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAP 113
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
K GH P+TCLAL + + T S D V W +
Sbjct: 2659 KTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 378 GKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHD 536
G +LI S G + + D+D KP + L H K IT +A+H + + S D
Sbjct: 640 GDNLIVGSKEGKMCWFDMDLSSKPYKTLKNHPKDITNVAVHRSYPLFASCSED 692
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHV 584
GH +T ++ +G+ + + S DG V W V++G V
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKV 460
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAV 347
H G V IS G+ + S S D + +W++ET + ++ A+
Sbjct: 422 HTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAI 467
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Frame = +3
Query: 18 DNTIAVFE--GPPFKFKC--TKQEHTRFAQAVRYSPD----GSLFASAGFDGKIFLYD-G 170
DNT+ V++ +K C Q+HT + + V ++P+ S AS DGK+ ++ G
Sbjct: 185 DNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVG 244
Query: 171 ATSEL-KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIW 296
E +G++ V+ +SWS G L G+ +W
Sbjct: 245 KEGEQWEGKVLKD-FMTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 117 GSLFASAGFDGKIFLY-DGATSELKGEIGSPAHKGGVYGISWSPD--GKQLLSCSGDKTC 287
GS+ AS +DG++ L+ +G ++ + HK V I+W+P G L S D
Sbjct: 70 GSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNI 129
Query: 288 AIW 296
+++
Sbjct: 130 SVF 132
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 480 ITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGI 659
I +++ +V+TA+ D C W+V+SG+ + + +GH + ++ + + S + G
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIK-MTFKGHSDYLHTVVSRSSASQILTGS 220
Query: 660 DD 665
+D
Sbjct: 221 ED 222
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 54 KFKCTKQEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGI 233
K K T + H+ + V S + DG ++D T + IGS K +
Sbjct: 192 KIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVS 251
Query: 234 SWSPDGKQ-LLSCSGDKTCAIWDI 302
S + DG + L C K A+W++
Sbjct: 252 SMALDGSESWLVCGQGKNLALWNL 275
Score = 26.2 bits (55), Expect(2) = 0.43
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHG 602
DV++ K K GH+ + + + + T S DG W+ +G+ V G Q
Sbjct: 187 DVES-GKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKK 245
Query: 603 NQVNGMRTTKDGS 641
+++ DGS
Sbjct: 246 SRLRVSSMALDGS 258
Score = 24.2 bits (50), Expect(2) = 0.43
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +3
Query: 186 KGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
KG G+ + + +S P + + +GD WD+E+
Sbjct: 150 KGPWGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVES 190
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 32.3 bits (70), Expect = 0.30
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H+ VY + G+ +++ S D+ IW +ET G+ + ++ +
Sbjct: 304 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCR-GHEGDITDLAVSSNNALV 362
Query: 390 ISVSLSGVINYLDVDNPD-KPKRVLMGHNKPITCLALHGNGKTVY---TASHDGCVTEWN 557
S S VI + PD P VL GH +T +A +VY ++S DG W+
Sbjct: 363 ASASNDFVIRVWRL--PDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 210 HKGGVYGISWSPDGK---QLLSCSGDKTCAIWDIETMQ 314
H G V I++SP QLLS S D TC IWD Q
Sbjct: 388 HTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQ 425
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGNQVNGMRTTKDG 638
L GH + C +G+ V T S D V W++++ +GH + + + +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCL-ASCRGHEGDITDLAVSSNN 359
Query: 639 SLLTIGIDD 665
+L+ +D
Sbjct: 360 ALVASASND 368
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 465 GHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
GH IT LA+ N V +AS+D + W + G
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDG 379
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAV 347
H G V ++WS D LLS S DKT +W Q +F+ N V
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYV 315
Score = 31.9 bits (69), Expect = 0.40
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 2/127 (1%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVE--NQQVSCLWQGK 383
HKG ++ + +SPDGK L + D IW I T+ + L + E NQQ + + +
Sbjct: 197 HKGKIWTLKFSPDGKYLATGGEDGVVKIWRI-TLSDSLLASFLRQQEPINQQAALVLFPQ 255
Query: 384 HLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
+ + P + L GH + LA + + +AS D V W
Sbjct: 256 KAFHIE-------------ETPFQELYGHTGDVLDLA-WSDSNLLLSASKDKTVRLWRTG 301
Query: 564 SGEARHV 584
+ HV
Sbjct: 302 CDQCLHV 308
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCL--WQGK 383
H+G V + ++ G L+S S D+ +W+ + R + G+ Q + +
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDR 113
Query: 384 HLISVSLSGVINYLDV--DNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWN 557
+I+ G + + + + KR+ H + L G+ Y+ DG V ++
Sbjct: 114 TIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQHFD 173
Query: 558 VDSGEARHV 584
+ S A V
Sbjct: 174 IRSNSATMV 182
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN---QVNGMRTT 629
L GH + + + G + + S D + WN SG + GH Q + T
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 630 KDGSLLTIGID 662
D +++T G D
Sbjct: 111 DDRTIITSGAD 121
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.9 bits (69), Expect = 0.40
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Frame = +3
Query: 159 LYDGATSELKGEIGSPAHKGGVYGISWSPDGKQ----LLSCSGDKTCAIWDIETMQRTTL 326
LY T + GE H V I++S D L SCS D T WD + Q+ +
Sbjct: 67 LYSPVTGQYYGEC--KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSR 124
Query: 327 FNMGNAVENQQVSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGN 506
+ GN E S +L++ + D N + + H +T + N
Sbjct: 125 IDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPN 184
Query: 507 -GKTVYTASHDGCVTEWNV--DSGEARHVE 587
+ +AS DG + +N D + H+E
Sbjct: 185 KPNKLLSASVDGLICLFNTEGDINDDDHLE 214
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 453 RVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
+V M H++P+ C A +G TV+T D W + SG
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSG 105
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/110 (23%), Positives = 49/110 (44%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V ++WS + LLS S DKT +W++ + +F+ + V Q + + ++
Sbjct: 512 HVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPV-DDRYF 569
Query: 390 ISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG 539
IS SL + + PD+ ++ +T +G+ V S+ G
Sbjct: 570 ISGSLDAKVRVWSI--PDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKG 617
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
AH G ++ I +S DGK L S D IW +
Sbjct: 411 AHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEI 197
Q H ++++S DG ASAG D I ++ +E KGE+
Sbjct: 410 QAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGEL 451
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 78 HTRFAQAVRYSPDGSLFASAGFDGK-IFLYDGATSELKGEIGSPAHKGGVYGIS---WSP 245
H V + P G D + IFL+ S+ E+ S G ++ +S W P
Sbjct: 119 HVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDP 178
Query: 246 DGKQLLSCSGDKTCAIWDIETMQR 317
++ +G+ + WD+ TM++
Sbjct: 179 HDVNAVAATGESSVQFWDLRTMKK 202
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.70
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Frame = +3
Query: 108 SPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGG--VYGISWSP-DGKQLLSCSGD 278
S G + A+ F G + + D T+ GE HK G V G+ +P + LLSC D
Sbjct: 277 SEKGVVLAADNF-GFLHMIDHRTNNSTGE-PILIHKQGSKVCGLDCNPVQPELLLSCGND 334
Query: 279 KTCAIWDIETMQ-RTTLFNMGN-AVENQQVSCLWQGKHLISVSLSGVINYLD--VDNPDK 446
IWD+ +Q + +L ++ + V N G +++ I D N D
Sbjct: 335 HFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWDSIFGNLDL 394
Query: 447 PKRVLMGHN 473
P R ++ N
Sbjct: 395 PSREIVHSN 403
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 252 KQLLSCSGDKTCAIWDIE-TMQRTTLFNMGNAVENQQVSCLW-QGKHLISVSLSGVINYL 425
K+L +CS D TC IWDIE ++ T L A + + W + + SVS G +
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLI----AHDKEVHDIAWGEARVFASVSADGSVRIF 201
Query: 426 DV 431
D+
Sbjct: 202 DL 203
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCA-IWDIETM 311
H+ V I+W+P + + GD T A IW++ T+
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 297
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 252 KQLLSCSGDKTCAIWDIE-TMQRTTLFNMGNAVENQQVSCLW-QGKHLISVSLSGVINYL 425
K+L +CS D TC IWDIE ++ T L A + + W + + SVS G +
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLI----AHDKEVHDIAWGEARVFASVSADGSVRIF 201
Query: 426 DV 431
D+
Sbjct: 202 DL 203
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCA-IWDIETM 311
H+ V I+W+P + + GD T A IW++ T+
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 297
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 252 KQLLSCSGDKTCAIWDIE-TMQRTTLFNMGNAVENQQVSCLW-QGKHLISVSLSGVINYL 425
K+L +CS D TC IWDIE ++ T L A + + W + + SVS G +
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLI----AHDKEVHDIAWGEARVFASVSADGSVRIF 201
Query: 426 DV 431
D+
Sbjct: 202 DL 203
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCA-IWDIETM 311
H+ V I+W+P + + GD T A IW++ T+
Sbjct: 263 HQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 297
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 399 SLSGVINYLDVDNPDKPKRV--LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGE 572
SL G+ N D+ K K L GH PIT LAL + ++++ S D V W D
Sbjct: 231 SLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLAL--DMTSIFSGSWDMSVRIW--DRSS 286
Query: 573 ARHVEGQGHGNQVNGMRTTKDGSLLTIGID 662
+ V+ H + V G+ + T G D
Sbjct: 287 MKCVKTLRHSDWVWGLAPHETTLASTSGSD 316
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSG 569
L GH + + + L + K V+T+ +D V W+++ G
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 69 KQEHTRFAQAV---RYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISW 239
KQE + A+ +SPDG +S D I ++D + + AHK V+ W
Sbjct: 575 KQESSESQSALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEW 634
Query: 240 SPDGKQLLSCSGDKTCAI 293
L+S S D I
Sbjct: 635 HSSYPLLVSISSDLAIGI 652
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLS 407
SWSPDG + S S D I+DI + +M A + + W + + VS+S
Sbjct: 589 SWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSM-KAHKKRVFKAEWHSSYPLLVSIS 645
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/144 (20%), Positives = 61/144 (42%)
Frame = +3
Query: 180 ELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQ 359
E+K ++ + + V + P +L+ T IW+ +T F + + +
Sbjct: 6 EIKRKLAQRSER--VKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEV-TELPVRS 62
Query: 360 VSCLWQGKHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDG 539
+ + + +++ + I + + DK K V H+ I C+A+H V ++S D
Sbjct: 63 AKFVARKQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDM 121
Query: 540 CVTEWNVDSGEARHVEGQGHGNQV 611
+ W+ + G A +GH + V
Sbjct: 122 LIKLWDWEKGWACTQIFEGHSHYV 145
Score = 28.7 bits (61), Expect = 3.7
Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 2/200 (1%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-D 248
+ H+ + + V P S+ D I L+D +I H V ++++P D
Sbjct: 96 EAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFE-GHSHYVMQVTFNPKD 154
Query: 249 GKQLLSCSGDKTCAIWDIETMQRT-TLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYL 425
S S D+T IW++ + TL V +LI+ S
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 426 DVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQGHGN 605
D + L GH ++ + H + T S DG V W+ + + G
Sbjct: 215 DYQTKSCVQ-TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL-E 272
Query: 606 QVNGMRTTKDGSLLTIGIDD 665
+V + K + IG D+
Sbjct: 273 RVWAIGYIKSSRRVVIGYDE 292
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +3
Query: 93 QAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCS 272
+A+RYS G LF SAG D + ++ + + S V ++ S D + C
Sbjct: 67 RAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR---VSAVAISSDDSHV--CY 121
Query: 273 GDKTCAIWDIE 305
DK +W IE
Sbjct: 122 ADKFGVVWVIE 132
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVNGMRTTKDGSL 644
H+ ++CL+L + +Y+AS D V W + + + +E + H + VN + TT + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIH--DLKCIESIKAHDDAVNSV-TTAESLV 190
Query: 645 LTIGIDDTL 671
T D T+
Sbjct: 191 FTGSADGTV 199
>At3g57610.1 68416.m06418 adenylosuccinate synthetase (ADSS)
identical to adenylosuccinate synthetase, chloroplast
precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS)
(AMPSase) (Swiss-Prot:Q96529) [Arabidopsis thaliana]
Length = 490
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 165 DGATSELKGEIGSPAHKGGVYGISWSPDGK 254
D A +E G IGS + GV G W +GK
Sbjct: 52 DSAATESLGRIGSLSQVSGVLGCQWGDEGK 81
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 450 KRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEG-QGHGNQVNGMRT 626
KR+ + H I+CLA+H +Y+ S D + W + + + +E + H + +NG+
Sbjct: 167 KRLWIEHADSISCLAVHAG--IIYSGSWDKTLKVWRL--SDLKCLESIKAHDDAINGL-V 221
Query: 627 TKDGSLLTIGID 662
DG + + D
Sbjct: 222 AGDGRVYSASAD 233
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCA-IWDIETM 311
H+ V I+W+P + +GD + A IWDI +M
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = +3
Query: 165 DGATSELKGEIGSPAHK---GGVYGISWSP-DGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
D + ELK + S + G + W+ + +++ + S D TC IWDIE R +
Sbjct: 116 DESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIE---REVVDT 172
Query: 333 MGNAVENQQVSCLWQGKHLI-SVSLSGVINYLDV 431
A + + W G + SVS G + D+
Sbjct: 173 QLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDL 206
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHG-NGKTVYTASHDGCVTEWNVDSG 569
+ G+I +DV N + + L+GH + + + V TAS D V WNV++G
Sbjct: 106 VKGIIRVIDV-NSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETG 161
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 144 DGKIFLYD--GATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGDKTCAIWDIET 308
+GK++++D L ++ K + + S DG +L+C D T WD+ T
Sbjct: 312 EGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDVIT 368
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 417 NYLDVDNPDKPKRVL-MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQ 593
NY++V + K VL + H ++CL+L+ +Y+ S D + W + + Q
Sbjct: 233 NYVEVR---RRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLE-SIQ 288
Query: 594 GHGNQVNGMRTTKDGSLLTIGIDDTL 671
H + +N + D L T D TL
Sbjct: 289 AHDDAINTVAAGFDDLLFTGSADGTL 314
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 30.3 bits (65), Expect = 1.2
Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 12/210 (5%)
Frame = +3
Query: 72 QEHTRFAQAVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-D 248
+ H + + V P S+ D I L+D L +I H V ++++P D
Sbjct: 96 EAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFE-GHSHYVMQVTFNPKD 154
Query: 249 GKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGVINYLD 428
S S D+T IW N+G+ N + +G + + G YL
Sbjct: 155 TNTFASASLDRTIKIW-----------NLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLI 203
Query: 429 VDNPDKPKRV-----------LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEA 575
+ D +V L GH ++ ++ H + T S DG V W+ +
Sbjct: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRL 263
Query: 576 RHVEGQGHGNQVNGMRTTKDGSLLTIGIDD 665
+ G +V + K + IG D+
Sbjct: 264 ENTLNYGL-ERVWAIGHIKGSRRVVIGYDE 292
Score = 28.3 bits (60), Expect = 4.9
Identities = 26/130 (20%), Positives = 53/130 (40%)
Frame = +3
Query: 222 VYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVS 401
V + P +L+ T IW+ +T F++ + + + + + +++ +
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDV-TELPVRSAKFIARKQWVVAGA 76
Query: 402 LSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARH 581
I + + DK K V H I C+A+H V ++S D + W+ + G
Sbjct: 77 DDMFIRVYNYNTMDKIK-VFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCT 135
Query: 582 VEGQGHGNQV 611
+GH + V
Sbjct: 136 QIFEGHSHYV 145
>At1g19430.1 68414.m02421 dehydration-responsive protein-related low
similarity to early-responsive to dehydration stress
ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 724
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 252 YRPATTRCRKR-RPCAPENRSLL*ALRWLRHRGRSCHRSQLMRTGCHLDCSVPLERNAYA 76
+R TR + PC +N L+ L+ RHR RSC + +M C VPL + Y
Sbjct: 221 WRLCNTRSKHNYMPCI-DNDGLIGRLQSYRHRERSCPKKPVM-------CLVPLPHDGYD 272
Query: 75 P 73
P
Sbjct: 273 P 273
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 459 LMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHV 584
L GH K ++ +AL +YT S D + W+ SG+ V
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGV 188
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLLSCSGDKTCAIWD-IETMQRTTLFNMGNAVENQQVSCLWQG 380
AH G + + +S DGK L S D +W+ IE +R F V SC++ G
Sbjct: 255 AHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFE----VAESDSSCVYFG 309
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 12 LRDNTIAVFEGPPFKFKCTKQEHTRFAQAVRYSPDG-SLFASAGFDGKIFLYDGATSELK 188
+R +I+ E P T H A +V Y+ +L A+ D + L+D + +E
Sbjct: 349 VRQASISASESNP---SFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPS 405
Query: 189 GEIGSPAHKGGVYGISWSPDGKQLLSCSGDK-TCAIWD 299
+ GG++ I++SPD LL+ G +WD
Sbjct: 406 CIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.5 bits (63), Expect = 2.1
Identities = 31/161 (19%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Frame = +3
Query: 96 AVRYSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHK-----GGVYGISWSPDGKQL 260
+V+++ +G ++G D ++ ++D + SP+H G +Y ++ P +
Sbjct: 484 SVKFACNGRKMLTSGAD-RLQMFDVNRKASSVRL-SPSHTQTLSHGTIYDVAVDPTSGLV 541
Query: 261 LSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSG-VINYLDVDN 437
++ DK I+DIE+ + F + L + + S S I ++D
Sbjct: 542 VTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFVT 601
Query: 438 PDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
+ + GH + +T + + K + + + DGC+ W +
Sbjct: 602 GELVAQAT-GHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 354 GFRRRCPC*IGWSSASSRYPI-SRRSCLPNRTVTVYRPATTRCRKRRPCAPENRSLL*AL 178
G RR P G S ++SR +RRS P T + RP TTR R P +R+ L A
Sbjct: 143 GLRR--PSSSGSSRSTSRPATPTRRSTTP--TTSTSRPVTTRASNSRSSTPTSRATLTAA 198
Query: 177 R 175
R
Sbjct: 199 R 199
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 165 DGATSELKGEIGSPAHK---GGVYGISWSP-DGKQLLSCSGDKTCAIWDIETMQRTTLFN 332
D + ELK + S + G + W+ + +++ + S D TC IWDIE R +
Sbjct: 116 DHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIE---REAVDT 172
Query: 333 MGNAVENQQVSCLWQGKHLI-SVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNG 509
A + + W G + SVS G + D+ + + ++ ++P T L G
Sbjct: 173 QLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEH-STIIYESSEPDTPLVRLGWN 231
Query: 510 K 512
K
Sbjct: 232 K 232
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCA-IWDIETM 311
H+ V I+W+P + +GD + A IWDI +M
Sbjct: 266 HQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM 300
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 105 YSPDGSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSGD 278
+SPDG S D I ++D + K AH+ V+ W L+S S D
Sbjct: 446 WSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQPLLISISSD 503
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 234 SWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLSGV 413
SWSPDG + S S D ++DI R ++ A + + W + +S+S
Sbjct: 445 SWSPDGLYITSGSVDPVIHVFDIRYNARKPTQSI-KAHQKRVFKAEWHYSQPLLISISSD 503
Query: 414 IN 419
+N
Sbjct: 504 LN 505
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 28.7 bits (61), Expect = 3.7
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 6/160 (3%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHL 389
H V + W P+ + S S D + WD+ET + + G A+ V G+
Sbjct: 271 HTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG----GESS 325
Query: 390 ISVSLSGVINYLDVDNPDKPKR-----VLMGHNKPITCLALH-GNGKTVYTASHDGCVTE 551
++ G L V +P KP H+ I+ H + + +AS+DG +
Sbjct: 326 ALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIML 385
Query: 552 WNVDSGEARHVEGQGHGNQVNGMRTTKDGSLLTIGIDDTL 671
W++ + V H ++V K S+++ G D L
Sbjct: 386 WDLRTAWPLSVI-DTHNDKVLSADWWKGESVVSGGADSNL 424
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 28.7 bits (61), Expect = 3.7
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Frame = +3
Query: 117 GSLFASAGFDGKIFLYDGATSELKGEIGSPAHKGGVYGISWSP-DGKQLLSCSGDKTCAI 293
G L+AS G + L+D +L + S + + GV +S S G QL + D + +
Sbjct: 1140 GYLYAS-GETSTVTLWDLEKEQLVRSVPSES-ECGVTALSASQVHGGQLAAGFADGSLRL 1197
Query: 294 WDIETMQRTTLFNMGNAVENQQVSCLWQG----KHLISVSLSGVINYLDVDNPDKPKRVL 461
+D+ + + + + V +Q ++S S +G I +LD+ +
Sbjct: 1198 YDVRSPEPLVCATRPHQKVERVVGLSFQPGLDPAKVVSASQAGDIQFLDLRTTRDTYLTI 1257
Query: 462 MGHNKPITCLALHGNGKTVYTAS 530
H +T LA+H + + + S
Sbjct: 1258 DAHRGSLTALAVHRHAPIIASGS 1280
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 28.7 bits (61), Expect = 3.7
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 106 TVQMAACSHQLASMARSSSMTEPPQSSKERSVLRRTRA-AFTASRGRRTVNSYCPVRETR 282
+V + + + ARSSS+T P S+ + S R+ + + +V+SY +R +
Sbjct: 138 SVSQSESGYHSSRPARSSSVTRPSISTSQYSSFTSGRSPSSILNTSSASVSSY--IRPSS 195
Query: 283 P-ARYGISRRCRGPPYSTWATPSKTNRCLAYGKGSISYPCPCPG*SITWMSTTRTSRSE 456
P +R S R P ++ A+ S T + G S S P S++ +T TSR +
Sbjct: 196 PSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMDKARP--SLSSRPSTPTSRPQ 252
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 387 LISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNVD 563
LI+ +G+I+ + + P++ + + H+ PI LAL + K + + +HD + WN++
Sbjct: 178 LITGCDNGIISLVGI-LPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLE 235
>At2g29125.1 68415.m03540 expressed protein
Length = 115
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 154 SSSMTEPPQSSKERSVLRRTRAAFTASRGRRTVNSYCPVRETRPARYGISRRC 312
SSS + SS RS R+ R + ++S T Y + + + AR+ I RRC
Sbjct: 51 SSSSSSSSSSSISRSFSRKERRSSSSSSSSIT-QKYSSLAKEQKARFYIMRRC 102
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 287 RDMGYRDDAEDHPIQHGQRRRKPTGVLPMAREASHIRVPVRGDQ 418
RD RD + DH Q RR+ V R++ H R RGD+
Sbjct: 11 RDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDHYRSSRRGDR 54
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 228 GISWSPDGKQLLSCSGDKTCAIWDI 302
G+ WSPDG L+ S D T +++ +
Sbjct: 56 GLKWSPDGSCFLASSEDNTLSLFHL 80
>At3g62770.2 68416.m07051 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 432
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 444 KPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTE-WNVDSGEARHVEG 590
K + +M H+ I C AL +G + TAS G + +N G R G
Sbjct: 239 KRTKFVMAHDSRIACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQESG 288
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 468 HNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVE 587
H +TC +L G+ V + S D + W + G+ E
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAE 933
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWDI 302
HK V S S G+ +LS S DKT +W I
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
>At1g15670.1 68414.m01881 kelch repeat-containing F-box family
protein similar to SP|Q9ER30 Kelch-related protein 1
(Sarcosin) {Rattus norvegicus}; contains Pfam profiles
PF01344: Kelch motif, PF00646: F-box domain
Length = 359
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 147 GKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLS 266
GK + G ++E +G+ A V WSP G++ LS
Sbjct: 217 GKFHVIGGYSTEEQGQFSKTAESFDVTTWRWSPQGEEFLS 256
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 207 AHKGGVYGISWSPDGKQLL-SCSGDKTCAIWDI 302
+HK V+ + W+P + +L SC + +WD+
Sbjct: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
>At5g42180.1 68418.m05134 peroxidase 64 (PER64) (P64) (PRXR4)
identical to SP|Q43872 Peroxidase 64 precursor (EC
1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) {Arabidopsis
thaliana}
Length = 317
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 334 MLNRVVLCIVSISHIAQVLSPEQDSNCLPSGDH 236
MLN +V+ I +S Q LSP + P DH
Sbjct: 5 MLNLLVIVIFVVSFDVQALSPHYYDHTCPQADH 37
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 210 HKGGVYGISWSPDGKQLLSCSGDKTCAIWD 299
H+G + ++W P L + S DKT WD
Sbjct: 113 HEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
>At1g73180.1 68414.m08469 eukaryotic translation initiation
factor-related similar to eukaryotic translation
initiation factor 2A (GI:21956484) [Homo sapiens];
similar to Eukaryotic translation initiation factor 3
subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
(Swiss-Prot:P55884) [Homo sapiens]
Length = 513
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 99 VRYSPDGSLFASAGFD---GKIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSC 269
+R++P G + AGF G + +D K ++GS + V WSPDG+ L+
Sbjct: 319 LRWNPKGRVLCVAGFGNLPGDMAFWDVVN---KKQLGSNKAEWSVTS-EWSPDGRYFLTA 374
Query: 270 S 272
S
Sbjct: 375 S 375
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 381 KHLISVSLSGVINYLDVDNPDKPKRVLMGHNKPITCLALHGNGKTVYTASHDGCVTEWNV 560
++LIS + G + D D P + H K + LA+H +GK D N+
Sbjct: 101 RNLISAAADGSVAIFDTD-PFVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNL 159
Query: 561 DSGEARHVEGQGH 599
G+ GH
Sbjct: 160 VRGKRSFCCRLGH 172
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 417 NYLDVDNPDKPKRVL-MGHNKPITCLALHGNGKTVYTASHDGCVTEWNVDSGEARHVEGQ 593
NY++V + K VL + H ++CL+L+ + +Y+ S D + W + + +
Sbjct: 229 NYVEVR---RRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLE-SIE 284
Query: 594 GHGNQVNGMRTTKDGSLLTIGIDDTL 671
H + VN + + D + T D TL
Sbjct: 285 AHDDAVNTVVSGFDDLVFTGSADGTL 310
>At1g25180.1 68414.m03127 hypothetical protein
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 172 PPQSSKERSVLRRTRAAFTASRGRRTVNSYCP---VRETRPARYGISRRCRGPPYSTWAT 342
PP + + R+ + TR + ASR + +S P R+ P +Y SR S+ A
Sbjct: 8 PPDTQRHRAARQLTRPKYPASRSVSSSSSAHPSQAARQLSPPKYPASRSVSS---SSSAH 64
Query: 343 PSKTNRCLA 369
PS+ R L+
Sbjct: 65 PSQAARQLS 73
>At1g25112.1 68414.m03120 hypothetical protein
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 172 PPQSSKERSVLRRTRAAFTASRGRRTVNSYCP---VRETRPARYGISRRCRGPPYSTWAT 342
PP + + R+ + TR + ASR + +S P R+ P +Y SR S+ A
Sbjct: 8 PPDTQRHRAARQLTRPKYPASRSVSSSSSAHPSQAARQLSPPKYPASRSVSS---SSSAH 64
Query: 343 PSKTNRCLA 369
PS+ R L+
Sbjct: 65 PSQAARQLS 73
>At1g25025.1 68414.m03116 hypothetical protein
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 172 PPQSSKERSVLRRTRAAFTASRGRRTVNSYCP---VRETRPARYGISRRCRGPPYSTWAT 342
PP + + R+ + TR + ASR + +S P R+ P +Y SR S+ A
Sbjct: 8 PPDTQRHRAARQLTRPKYPASRSVSSSSSAHPSQAARQLSPPKYPASRSVSS---SSSAH 64
Query: 343 PSKTNRCLA 369
PS+ R L+
Sbjct: 65 PSQAARQLS 73
>At5g62570.1 68418.m07852 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 487
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 150 KIFLYDGATSELKGEIGSPAHKGGVYGISWSPDGKQLLSCSG 275
++ YD S ++ + +PA +G V GI +S G L S G
Sbjct: 350 EVISYDDEVSMMRNVLNAPASQGSVAGIDYS--GLSLTSLDG 389
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 94 KRYATVQMAACSHQLASMARSSSMTEPPQSSKERSVLRRTRAAFTASRG 240
K++ +Q+ C + S + SSS++ PP S S T F + RG
Sbjct: 22 KKHKNLQLKICRSSIESSSSSSSLSSPPSLSSPIS-RTWTHQVFPSFRG 69
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 477 PITCLALHGNGKTVYTASHDGCVTEWNVD 563
P TCL + + V++ DG + W +D
Sbjct: 217 PTTCLMVDNGNRLVWSGHKDGKIRSWKMD 245
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +3
Query: 228 GISWSPDGKQLLSCSGDKTCAIWDIETMQRTTLFNMGNAVENQQVSCLWQGKHLISVSLS 407
G +W+P ++ + + + WD+ TM++ + V N + L + L+S
Sbjct: 173 GGAWNPHDVNSVAATSESSIQFWDLRTMKKNNSIERAH-VRNVDYN-LKREHILVSADDE 230
Query: 408 GVINYLDVDNPDKPKRVLMGH 470
I+ D+ P + L GH
Sbjct: 231 SGIHLWDLRKTKFPVQELPGH 251
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 402 LSGVINYLDVDNPDKPKRVLM 464
L+ ++N +D+D+PD PK V +
Sbjct: 1969 LTSILNVIDLDHPDAPKLVTL 1989
>At1g01560.1 68414.m00073 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK11) similar to MAP kinase 5
GI:4239889 from [Zea mays]; mitogen-activated protein
kinase (MAPK)(AtMPK11), PMID:12119167
Length = 275
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 285 CAIWDIETMQRTTLFNMGNAVEN--QQVSCLWQGKHLISVSLSGVINYLDVDNPDKP 449
CA W+ ET + + +GNA N L + K L + VI +D+ P +P
Sbjct: 55 CAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQP 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,726,082
Number of Sequences: 28952
Number of extensions: 365334
Number of successful extensions: 2163
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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