Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30856
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293...    33   0.31 
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300...    31   0.95 
09_04_0288 + 16416409-16416603,16417584-16417635,16417842-164178...    31   1.3  
12_02_0914 + 24248993-24249047,24249995-24250122,24250523-242506...    29   2.9  
03_03_0156 + 14939355-14939435,14939559-14939624,14940331-149404...    28   6.7  
01_06_1139 + 34835430-34835883,34836377-34836855                       28   8.9  

>11_04_0391 +
           17127309-17127449,17127886-17127950,17129209-17129305,
           17129729-17130193,17130505-17130528
          Length = 263

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +1

Query: 514 DHNHMREVKNVQM-LEEGIHETPEA-SEFSLNDSTNENINFQHKRKWG*IHYPR 669
           +H+  +E KN +M +++ + E   A S  S  DST  +I+F H+R  G    PR
Sbjct: 196 EHSSCKEAKNNEMEVDKQVDELASAVSRLSTADSTPSSISFGHRRSRGLAFVPR 249


>11_06_0768 +
           27129007-27129038,27129140-27129220,27129723-27130089,
           27130165-27130255,27130515-27130595,27130764-27131830,
           27132060-27132071,27132465-27133209,27133210-27135244,
           27135712-27135787,27135925-27136029,27137080-27137166
          Length = 1592

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 499 ILETVDHNHMREVKNVQMLEEGIHETPEASEFSLNDSTNENINFQHKRKWG 651
           +LE  D N  ++ K++  L+E I  +PE S+   ND+  E  N   ++K G
Sbjct: 592 VLEDQDWNSQQKAKSITELDELIRHSPEQSQ-KTNDAPLEEDNLHLRQKDG 641


>09_04_0288 +
           16416409-16416603,16417584-16417635,16417842-16417890,
           16418354-16418497,16418730-16418783,16418883-16418948,
           16419174-16419252,16419390-16419467
          Length = 238

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = +1

Query: 70  RSANISFKNSHANEQPVRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIKYFENISSSK 249
           R +++SF+       P+  C +    +E++     E   Q G   + NH KY     SSK
Sbjct: 41  RVSSVSFRR-RPPASPLVRCSQDPGKIEVFNTEGTE-QSQGGSTGSINHGKYSTRSFSSK 98

Query: 250 DQTFRNYVHYL 282
           D     Y HYL
Sbjct: 99  DANITTYNHYL 109


>12_02_0914 +
           24248993-24249047,24249995-24250122,24250523-24250633,
           24250714-24250836,24251183-24251269
          Length = 167

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +1

Query: 427 GQYLTDEEIKERDRITENVSFLNLILETVDHNHMREVKNVQMLEEGIHETPEASEFSLND 606
           G+Y  +   K R  + + +S LNL ++       R   NV+          E S F+ N+
Sbjct: 90  GRYYDEGLEKTRQTLGDKISQLNLAIDKAASRLKRVAGNVEKEAINDESEIEISSFNDNE 149

Query: 607 STNENINFQ 633
              EN+N Q
Sbjct: 150 LVAENLNEQ 158


>03_03_0156 +
           14939355-14939435,14939559-14939624,14940331-14940414,
           14940796-14940875,14941313-14941358,14941456-14941566,
           14942224-14942290,14942615-14942630,14942871-14942931,
           14943015-14943145,14943243-14943360,14944053-14944176,
           14944517-14944618,14944717-14944785,14946250-14946329
          Length = 411

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 574 FHEYLLQAFAHSSPLSCGCDPQ 509
           +H+Y+LQA      LSC C P+
Sbjct: 342 YHQYMLQAAIFCEALSCLCSPE 363


>01_06_1139 + 34835430-34835883,34836377-34836855
          Length = 310

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 130 EKLQMALEIYKRSPVEFLMQFGKYLAPNHIK-YFENISSSKD 252
           +++++ +E+Y+R PV FL +  +  A   +K YF+  S  KD
Sbjct: 69  QQMELTVEVYRREPV-FLREHLQGTAVIQMKEYFDKFSQGKD 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,427,653
Number of Sequences: 37544
Number of extensions: 296427
Number of successful extensions: 636
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)