Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30856
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119623-1|AAM50277.1|  364|Drosophila melanogaster LD46912p pro...    86   4e-17
AE014134-1457|AAF52638.1|  364|Drosophila melanogaster CG7810-PA...    86   4e-17

>AY119623-1|AAM50277.1|  364|Drosophila melanogaster LD46912p
           protein.
          Length = 364

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
 Frame = +1

Query: 43  VTDIIDYLVRSANISFKNSHANEQPVRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIK 222
           + DI   L  +  I FK+   ++  +   EK Q+A + + ++   FL++FG +L    + 
Sbjct: 29  IIDIFKSLAENNQIVFKSQQIDDPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLG 88

Query: 223 YFENISSSK----DQTFRNYVHYLSDYHSE-TSXXXXXXXXXYKALQKMKIKTDYFSEKQ 387
            F+ ++  +    D+        L D+  +  +         Y A+Q++  K +YFSE +
Sbjct: 89  SFQELAVKEPIKADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHE 148

Query: 388 MMYRNPLLYEQLVGQYLTDEEIKERDRI-TENVSFLNLILETVDHNHMREVKNVQMLEEG 564
           MM R P LY++LVGQYLT+ E K RD     N SF  +++ T++     E+   +  +EG
Sbjct: 149 MMQRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELLE-ETQQEG 207

Query: 565 IHETPEASEFSLNDSTNENINFQHKRKWG 651
                  SE   N   + ++    +++WG
Sbjct: 208 KQSVQVTSE--SNPQADCDVPVACRKQWG 234


>AE014134-1457|AAF52638.1|  364|Drosophila melanogaster CG7810-PA
           protein.
          Length = 364

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
 Frame = +1

Query: 43  VTDIIDYLVRSANISFKNSHANEQPVRTCEKLQMALEIYKRSPVEFLMQFGKYLAPNHIK 222
           + DI   L  +  I FK+   ++  +   EK Q+A + + ++   FL++FG +L    + 
Sbjct: 29  IIDIFKSLAENNQIVFKSQQIDDPEIPVEEKQQIARDAFDKNRENFLIRFGGFLNVRQLG 88

Query: 223 YFENISSSK----DQTFRNYVHYLSDYHSE-TSXXXXXXXXXYKALQKMKIKTDYFSEKQ 387
            F+ ++  +    D+        L D+  +  +         Y A+Q++  K +YFSE +
Sbjct: 89  SFQELAVKEPIKADENLEEMCLLLEDFRRKLNTRAVSIKNRRYHAMQQLLDKGEYFSEHE 148

Query: 388 MMYRNPLLYEQLVGQYLTDEEIKERDRI-TENVSFLNLILETVDHNHMREVKNVQMLEEG 564
           MM R P LY++LVGQYLT+ E K RD     N SF  +++ T++     E+   +  +EG
Sbjct: 149 MMQRAPDLYQELVGQYLTEAEKKARDSYDVRNTSFSGILMHTLEKKQRDELLE-ETQQEG 207

Query: 565 IHETPEASEFSLNDSTNENINFQHKRKWG 651
                  SE   N   + ++    +++WG
Sbjct: 208 KQSVQVTSE--SNPQADCDVPVACRKQWG 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,039,354
Number of Sequences: 53049
Number of extensions: 554561
Number of successful extensions: 1558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)