Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30854
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.21 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   1.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   5.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   7.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   7.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   7.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 93  PAPTPKPMKQSDAKPKGKQTTFVNSLHEE 179
           P P P+P K S  KP+  + T V    E+
Sbjct: 251 PTPKPRPTKVSRRKPRPPRPTQVEEEEEK 279


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 166 HYTKNTFNSRIHSNASCSMYLGTPNS 243
           HY+KNT+N + +  A     LG P+S
Sbjct: 345 HYSKNTYNEQGNKLADLYKSLG-PDS 369


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 166 HYTKNTFNSRIHSNASCSMYLGTPNS 243
           HY+KNT+N + +  A     LG P+S
Sbjct: 237 HYSKNTYNEQGNKLADLYKSLG-PDS 261


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 99  PTPKPMKQSDAKPKGKQTTFVNSLHEEHIQQS 194
           P P P+    +KP   ++     LHEE ++ S
Sbjct: 38  PKPAPIYSPVSKPVSFESLPNRRLHEEFLRSS 69


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 57  ATKVFTAPTSKRPAPTPKPMKQSDAKP 137
           A K    P    P P P+P + ++++P
Sbjct: 385 ALKSDEIPPEPVPTPEPQPTQTTESEP 411


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 247 P*NSVSPSTLNMRRLNEFDC*MCS 176
           P +SVSP   +  R   F C +C+
Sbjct: 118 PTSSVSPEVKDSSRDRPFTCEVCN 141


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +3

Query: 45  SAPV-ATKVFTAPTSK---RPAPTPKPMKQSDAKPKGKQTTFVNS 167
           S+P+ A KV  +PT+     P P  +     DA  K   T F ++
Sbjct: 83  SSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASSKRIXTAFTST 127


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 63  KVFTAPTSKRPAPTPKP 113
           KV  +PTS  P   P P
Sbjct: 24  KVAASPTSANPDEEPDP 40


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 63  KVFTAPTSKRPAPTPKP 113
           KV  +PTS  P   P P
Sbjct: 24  KVAASPTSANPDEEPDP 40


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 12  EDGLPDAATELSAPVATKVFTAPTSKRPAP 101
           E+G P+   +L     T   T  ++  PAP
Sbjct: 18  EEGSPEEGDKLEGDEDTGSMTPNSAASPAP 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,717
Number of Sequences: 336
Number of extensions: 1111
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)