Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30854
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 33 0.064
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 33 0.064
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 33 0.064
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 33 0.064
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 33 0.064
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 32 0.11
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 0.79
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 29 1.0
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 28 1.8
AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical ... 28 1.8
Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical pr... 27 2.4
AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical ... 27 2.4
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 27 2.4
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 27 4.2
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 27 4.2
AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical ... 27 4.2
AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin prot... 27 4.2
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 27 4.2
AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin prot... 27 4.2
AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin prot... 27 4.2
Z78061-2|CAB01493.1| 474|Caenorhabditis elegans Hypothetical pr... 26 5.5
U40953-4|AAB52649.2| 421|Caenorhabditis elegans Hypothetical pr... 26 5.5
U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,... 26 5.5
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 26 5.5
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 26 5.5
Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical pr... 26 7.3
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 26 7.3
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 26 7.3
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 26 7.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 26 7.3
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 25 9.7
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 25 9.7
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 25 9.7
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 25 9.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 9.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 9.7
AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical... 25 9.7
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 25 9.7
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 25 9.7
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAP-TPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
+ +E S A+ V +APT P+P T P K + P G TT ++H QQ
Sbjct: 9 SCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAPLMPSGHVTTVDQQNRQQHQQQ 63
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAP-TPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
+ +E S A+ V +APT P+P T P K + P G TT ++H QQ
Sbjct: 11 SCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAPLMPSGHVTTVDQQNRQQHQQQ 65
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAP-TPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
+ +E S A+ V +APT P+P T P K + P G TT ++H QQ
Sbjct: 8 SCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAPLMPSGHVTTVDQQNRQQHQQQ 62
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAP-TPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
+ +E S A+ V +APT P+P T P K + P G TT ++H QQ
Sbjct: 46 SCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAPLMPSGHVTTVDQQNRQQHQQQ 100
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAP-TPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
+ +E S A+ V +APT P+P T P K + P G TT ++H QQ
Sbjct: 120 SCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAPLMPSGHVTTVDQQNRQQHQQQ 174
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 57 ATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLH 173
+T+V AP K P PTPKP+ K K FV S H
Sbjct: 370 STEVEEAPKKKDPEPTPKPL-DGITNEKRKTLYFVTSTH 407
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKG 143
P A A V TK TAP SK P P P + + A P+G
Sbjct: 290 PRTAVPSRATVLTK--TAPASKAPTRAPVPARSAPAPPRG 327
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKG 143
P A A V TK TAP SK P P P + + A P+G
Sbjct: 290 PRTAVPSRATVLTK--TAPASKAPTRAPVPARSAPAPPRG 327
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 31.5 bits (68), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKG 143
P A A V TK TAP SK P P P + + A P+G
Sbjct: 290 PRTAVPSRATVLTK--TAPASKAPTRAPVPARSAPAPPRG 327
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 9 QEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPK 140
Q LP T+ APV +P + +P P P P + + +PK
Sbjct: 613 QSTALPQQTTD--APVDPVTEASPLNPQPPPPPSPSPEPEPEPK 654
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 21 LPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKP 137
LPD T+ AT+V P+P P+P +S +P
Sbjct: 566 LPDETTDAPEEPATEVPNPQPPSPPSPEPEPEPKSTPEP 604
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 9 QEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKP 137
++D P+A E A +A + ++P P P+P+ +++A P
Sbjct: 115 KKDVEPEAEPEPEADIAPEPEKVAIVEKPEPKPEPITETEASP 157
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 ALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQTTFV-NSLHEE 179
A+Q + A + SAPVA +A + + PTP+ + K ++T +V + H+E
Sbjct: 51 AVQPEVAEPVAVQESAPVAP--VSATEAPKKEPTPEEDLVAPLAKKFQRTVYVDDGTHKE 108
Query: 180 HI 185
HI
Sbjct: 109 HI 110
>AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical
protein E02H9.2 protein.
Length = 231
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 27 DAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQTT 155
D L AP T T P K P TPKP Q D K K +
Sbjct: 185 DGLCSLGAPTTTTTTTTP--KPPPATPKP-DQKDPKDDAKSAS 224
>Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical
protein T04B2.3a protein.
Length = 412
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 136 RKENKRPS*IHYTKNTFNSRIHSNASCSMYLGTPNSKDATRDLLQRTND 282
RK+ KR S H T + N+ HS + CS + PN ++ D Q+ +D
Sbjct: 130 RKKRKRRS-KHSTNSMVNA--HSTSPCSSHPSDPNGDISSCDEFQKHSD 175
>AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical
protein Y45F10A.2 protein.
Length = 502
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 161 KFTTRRTHSTVEFIQTPHVQCTWGHRILRMRRVTSFSALTTARCS*LCGNNTINH 325
K+ R STVE + T + HR++ +R S A T C+ L N N+
Sbjct: 304 KYGCRVIQSTVETLSTDQYAQCYQHRVILLR---SLMAGVTRNCTQLASNEFANY 355
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 45 SAPVATKVFTA-PTSKRPAPTPKPMKQSDAKPKGK 146
S P +++V A P++ P P PKP + D KP K
Sbjct: 666 SKPSSSEVPPAEPSAPEPKPAPKPDPKPDPKPDPK 700
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +3
Query: 15 DGLPDAATELSAPVATKVFTAPTSKRPAPTPKPM-KQSDAKPKGKQTTFVNSLHEEHIQQ 191
D P A +P+A T T P + K S + P+GK+ + LH +H QQ
Sbjct: 12 DFTPVPAEPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGKKDEKNHILHHQHHQQ 71
Query: 192 SNSFKR 209
K+
Sbjct: 72 QQQSKQ 77
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 111 PMKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRLMF 218
P S G TT+ N + EEH S K+++F
Sbjct: 765 PKAASTINEFGPGTTYQNVISEEHATSSQKIKKVIF 800
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 111 PMKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRLMF 218
P S G TT+ N + EEH S K+++F
Sbjct: 765 PKAASTINEFGPGTTYQNVISEEHATSSQKIKKVIF 800
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +3
Query: 15 DGLPDAATELSAPVATKVFTAPTSKRPAPTPKPM-KQSDAKPKGKQTTFVNSLHEEHIQQ 191
D P A +P+A T T P + K S + P+GK+ + LH +H QQ
Sbjct: 12 DFTPVPAEPGKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQGKKDEKNHILHHQHHQQ 71
Query: 192 SNSFKR 209
K+
Sbjct: 72 QQQSKQ 77
>AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical
protein Y68A4B.2 protein.
Length = 209
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 36 TELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKG 143
T + T T+ T+ P P P QSD +P G
Sbjct: 21 TTSTTTTTTTTTTSTTTTTPIPCPTGWAQSDERPSG 56
>AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin
protein.
Length = 401
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 78 PTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEH 182
PT + P P P S A P+G + V S H++H
Sbjct: 334 PTRRLP---PHPSSSSAAPPRGHMSDKVESRHKDH 365
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 90 RPAPTPKPMKQSDAKPKGK 146
+P P PKP + D KPK K
Sbjct: 170 KPKPEPKPKPKPDPKPKPK 188
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSK-RPAPTPKPMKQSDAKPKGK 146
P T+L + K P K P P P PM + KPK K
Sbjct: 253 PKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHK 294
>AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin protein
1, isoform a protein.
Length = 401
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 78 PTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEH 182
PT + P P P S A P+G + V S H++H
Sbjct: 334 PTRRLP---PHPSSSSAAPPRGHMSDKVESRHKDH 365
>AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin protein
1, isoform b protein.
Length = 474
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 78 PTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEH 182
PT + P P P S A P+G + V S H++H
Sbjct: 407 PTRRLP---PHPSSSSAAPPRGHMSDKVESRHKDH 438
>Z78061-2|CAB01493.1| 474|Caenorhabditis elegans Hypothetical
protein C48G7.2 protein.
Length = 474
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 74 SADQQEASAYTETDEAVRRETERKTN 151
+ +++ SAY E+DEAVR+ R+ +
Sbjct: 86 NGNERPLSAYEESDEAVRQRKNRRAS 111
>U40953-4|AAB52649.2| 421|Caenorhabditis elegans Hypothetical
protein F53B1.6 protein.
Length = 421
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 60 TKVFTAPTSKRPAPTPKPMKQSDAKP 137
T++ T + ++P P PKP + + KP
Sbjct: 109 TQIITPASKRKPKPPPKPPQLVEDKP 134
>U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,
short chain protein5 protein.
Length = 378
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 96 APTPKPMKQSDAKPKGKQTTFVNSLH 173
APTP P S P+ T+F SLH
Sbjct: 2 APTPPPPLSSTLIPEESSTSFFASLH 27
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQ 149
P S+P A+K + P KR +P P ++ + + + K+
Sbjct: 112 PGVQKSSSSPSASKAESRPLRKRISPPPSENREKEKQSRDKE 153
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 83 QQEASAYTETDEAVRRETERKTNDLRKFTTR 175
+ E SA ET+ + ETERK + R+ R
Sbjct: 1059 EAEESARKETERRAKMETERKVAEARRAVER 1089
>Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical
protein T05C12.11 protein.
Length = 312
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/53 (22%), Positives = 22/53 (41%)
Frame = +2
Query: 104 TETDEAVRRETERKTNDLRKFTTRRTHSTVEFIQTPHVQCTWGHRILRMRRVT 262
T + R T+ TN KFT + + P ++ +W H + + +T
Sbjct: 219 TPSTSTSRTTTKNDTNKWSKFTLGKNPTVSSSTSEPKMESSWTHAVNKEWSIT 271
>Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical
protein R07E3.7 protein.
Length = 195
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 111 PMKQSDAKPKGKQTTFVNSLHEEHIQQSNS 200
PMK+ P F+N +HE H + S
Sbjct: 126 PMKKQVTTPDRPSIDFLNEIHESHAKTKES 155
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 45 SAPVATKV--FTAPTSKRPAPTPKPMKQS 125
S+P+ ++ F PT K P T +P+KQS
Sbjct: 195 SSPLRQRIASFLTPTKKAPKLTAQPVKQS 223
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 9 QEDGLPDAATELSAPVATKVFTAPTSKRP-APTPKPMKQSDAKPKGKQTTF--VNSLHEE 179
+EDGL D P +T +AP +K P A P+P + + + ++ H
Sbjct: 297 EEDGLDDDDVRRHIPAST---SAPVAKHPEAAMPEPAAEHSSIQSSEAQALGEISGAHPI 353
Query: 180 HIQQS 194
HI +S
Sbjct: 354 HIGES 358
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 81 TSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRL 212
T KR A P +SDA PKG + + +++I + RL
Sbjct: 49 TGKRNAKVT-PSNESDAVPKGGKLKLTEGVVQDYINIEKAINRL 91
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 45 SAPVATKV--FTAPTSKRPAPTPKPMKQS 125
S+P+ ++ F PT K P T +P+KQS
Sbjct: 195 SSPLRQRIASFLTPTKKAPKLTAQPVKQS 223
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 72 TAPTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRLMFNVLG 230
TAP + AP P P + P Q + + H QQ K+ +F V+G
Sbjct: 419 TAPPAPTSAPVPTPRHVAPLAPTVAQQSHLTPNHRHAAQQ----KKHLFPVVG 467
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +3
Query: 6 LQEDGLPDAATELSAP--VATKVFTAPTSKRPAPTPKPM----KQSDAKPKGKQ 149
+ E L +A +L+ VA T TS P PTP+P+ + A PK K+
Sbjct: 66 VSESHLTSSAEKLAREKHVAEAASTMSTSPAPTPTPEPVVTTTTTTSAAPKRKE 119
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +3
Query: 6 LQEDGLPDAATELSAP--VATKVFTAPTSKRPAPTPKPM----KQSDAKPKGKQ 149
+ E L +A +L+ VA T TS P PTP+P+ + A PK K+
Sbjct: 174 VSESHLTSSAEKLAREKHVAEAASTMSTSPAPTPTPEPVVTTTTTTSAAPKRKE 227
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 12 EDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKP 137
E+G AA APV + PAP P+ DA P
Sbjct: 178 EEGAAPAAPAEPAPVPAPEPAPEAAPAPAPEAAPVPAQDAAP 219
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 51 PVATKVFTAPTSKRPAPTPKPMKQSDAK 134
PV+T + +P +P P PKP+ S AK
Sbjct: 962 PVSTPIMVSP---QPIPIPKPVDASIAK 986
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 140 RKTNDLRKFTTRRTHSTVEFIQTPHVQC 223
+K+N L ++T +TVEF PH C
Sbjct: 372 KKSNKLEPMVVQKTMATVEF-DPPHYTC 398
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.4 bits (53), Expect = 9.7
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 68 LHSADQQEASAYTETDEAVRRETERKTNDLRKFTTRRTHSTVEFIQTPHVQCTWGHRILR 247
LH+ +++ +E A + +TE+ T+D+ TRR S + + R
Sbjct: 13812 LHNRFSTDSAVESEPKNAHKDDTEKTTDDM---MTRRKSSAIFSDDEQSISSKTSSEGRR 13868
Query: 248 MRRVTSFSALTTARCS*LCGNN 313
RR T F++ + L G+N
Sbjct: 13869 RRRRTGFASKFASDTLALRGDN 13890
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.4 bits (53), Expect = 9.7
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 68 LHSADQQEASAYTETDEAVRRETERKTNDLRKFTTRRTHSTVEFIQTPHVQCTWGHRILR 247
LH+ +++ +E A + +TE+ T+D+ TRR S + + R
Sbjct: 13812 LHNRFSTDSAVESEPKNAHKDDTEKTTDDM---MTRRKSSAIFSDDEQSISSKTSSEGRR 13868
Query: 248 MRRVTSFSALTTARCS*LCGNN 313
RR T F++ + L G+N
Sbjct: 13869 RRRRTGFASKFASDTLALRGDN 13890
>AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical
protein Y113G7A.4b protein.
Length = 873
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 140 RKTNDLRKFTTRRTHSTVEFIQTPHVQC 223
+K+N L ++T +TVEF PH C
Sbjct: 372 KKSNKLEPMVVQKTMATVEF-DPPHYTC 398
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 140 RKTNDLRKFTTRRTHSTVEFIQTPHVQC 223
+K+N L ++T +TVEF PH C
Sbjct: 372 KKSNKLEPMVVQKTMATVEF-DPPHYTC 398
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 51 PVATKVFTAPTSKRPAPTPKPMKQS 125
P +T T P S +PTP P+++S
Sbjct: 172 PSSTPTPTPPPSSSSSPTPTPLRRS 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,199,878
Number of Sequences: 27780
Number of extensions: 120026
Number of successful extensions: 798
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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