Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30854
(330 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 30 0.33
At5g38560.1 68418.m04662 protein kinase family protein contains ... 30 0.43
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 29 0.57
At4g26760.1 68417.m03855 microtubule associated protein (MAP65/A... 29 1.00
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 1.3
At1g06760.1 68414.m00718 histone H1, putative similar to histone... 28 1.3
At3g18990.1 68416.m02410 transcriptional factor B3 family protei... 28 1.7
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 28 1.7
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 27 2.3
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 4.0
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 4.0
At2g31880.1 68415.m03895 leucine-rich repeat transmembrane prote... 27 4.0
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 27 4.0
At5g12050.1 68418.m01409 expressed protein 26 5.3
At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 26 5.3
At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 26 5.3
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 26 5.3
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 26 7.0
At4g27370.1 68417.m03929 myosin family protein contains Pfam pro... 26 7.0
At1g73690.1 68414.m08533 cell division protein kinase, putative ... 26 7.0
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 26 7.0
At1g18040.1 68414.m02231 cell division protein kinase, putative ... 26 7.0
At1g12080.2 68414.m01397 expressed protein 26 7.0
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 25 9.3
At4g30680.1 68417.m04349 MA3 domain-containing protein similar t... 25 9.3
At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containi... 25 9.3
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 25 9.3
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 25 9.3
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 25 9.3
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 21 LPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKP 137
LP ++T L AP P SK PAP P P+ ++ P
Sbjct: 704 LPPSSTRLGAPPPPP--PPPLSKTPAPPPPPLSKTPVPP 740
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQTT 155
PDA+ AP T P+ P TP P ++ + PK +T
Sbjct: 119 PDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSPST 162
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 29.5 bits (63), Expect = 0.57
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEHIQQ 191
++T L+AP T+ P S +P QSD + T S E+ +QQ
Sbjct: 99 SSTTLAAPSTTQSIAVPASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQ 152
>At4g26760.1 68417.m03855 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 578
Score = 28.7 bits (61), Expect = 1.00
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 107 ETDEAVRR--ETERKTNDLRKFTTRRTHSTVEFIQTPHVQC 223
ETD +++R + +RK +L+K + R +EF+ T H C
Sbjct: 152 ETDLSLKRLDDFQRKLQELQKEKSDRLQKVLEFVSTVHDLC 192
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPK--GKQTTFVNSLHEEHIQ 188
P T S P K P +K + TP +QSD K K GK+T S+ E++ Q
Sbjct: 16 PSGGTGASGP--KKRGRKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKYSQ 70
>At1g06760.1 68414.m00718 histone H1, putative similar to histone
H1-1 GB:CAA44312 GI:16314 from [Arabidopsis thaliana];
identical to cDNA H1-1C mRNA for histone H1-1 (partial)
GI:732560
Length = 274
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 21 LPDAATELSAPVATKVFTAPTSKRPA--PTPKPMKQSDAKPKGKQTTFV 161
LP A+ + S+P A +AP K+PA K ++ A K K+T V
Sbjct: 128 LPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAV 176
>At3g18990.1 68416.m02410 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 341
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 LQEDGLPDAATELSAPVATKVFTAPT-SKRPAPTPKPMKQSDAKPKGKQTTFVNS 167
L E +P S+ + T +FT P ++ P PTPK K+ K K +NS
Sbjct: 144 LPESTVPANKGYASSAIQT-LFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINS 197
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 122 VRRETERKTNDLRKFTTRRTHSTVEFIQTPHVQCTWGHRILRMRRVTSFSAL 277
+R E K D R +T +F++TP + WG+R++ + V + + L
Sbjct: 407 LRESQEWKRMDGRDHFMVAGRTTWDFMRTPENESDWGNRLMILPEVRNMTML 458
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTS-KRPAPTPKPMKQSDAKPK 140
P + + P A K P+ K PAPTPKP+ PK
Sbjct: 81 PPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPK 120
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSD 128
P +SAPVA T P P PTP P+ ++
Sbjct: 108 PQTPASVSAPVAPAP-TRPPPPAPTPTPAPVAATE 141
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 24 PDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSD 128
P +SAPVA T P P PTP P+ ++
Sbjct: 108 PQTPASVSAPVAPAP-TRPPPPAPTPTPAPVAATE 141
>At2g31880.1 68415.m03895 leucine-rich repeat transmembrane protein
kinase, putative
Length = 641
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 30 AATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKPKGKQ 149
A T S+P K + TSK P PKP K K K K+
Sbjct: 243 AETPTSSPT-NKPNNSTTSKAPKGAPKPGKLKKKKKKSKK 281
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 87 KRPAPTPKPMKQSDAKPKGKQTT 155
K P+P+P P K ++K K K+++
Sbjct: 68 KSPSPSPSPKKSKESKKKHKRSS 90
>At5g12050.1 68418.m01409 expressed protein
Length = 362
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 120 QSDAKPKGKQTTFVNSLHEEHIQQSNSFK 206
++ A P G+ F+NSL + +QSN+ K
Sbjct: 159 KTPASPGGRIVNFLNSLFSNNSKQSNAVK 187
>At1g75080.2 68414.m08720 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 21 LPDAATELSAPVATKVFTAPTSKRPAPTP---KPMKQSDAKPKGKQTTF 158
LP S PV V ++PTSK P P P KQS A K +F
Sbjct: 165 LPSLRISNSCPVTPPV-SSPTSKNPKPLPNWESIAKQSMAIAKQSMASF 212
>At1g75080.1 68414.m08719 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 21 LPDAATELSAPVATKVFTAPTSKRPAPTP---KPMKQSDAKPKGKQTTF 158
LP S PV V ++PTSK P P P KQS A K +F
Sbjct: 165 LPSLRISNSCPVTPPV-SSPTSKNPKPLPNWESIAKQSMAIAKQSMASF 212
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 57 ATKVFTAPTSKRPAPTPKPMKQSDAKPK 140
++K T T ++P+P P+P K KP+
Sbjct: 419 SSKPETPKTPEQPSPKPQPPKHESPKPE 446
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 51 PVATKVFTAPTSKRPAPTPKPMKQSDAKPKGK 146
P K APT +P PTP P + KPK K
Sbjct: 28 PPKPKPAPAPTPPKPKPTPAP---TPPKPKPK 56
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 51 PVATKVFTAPTSKRPAPTPKPMKQSDAKPK 140
P K APT +P P P P KPK
Sbjct: 94 PPNPKPTPAPTPPKPKPAPAPAPTPAPKPK 123
>At4g27370.1 68417.m03929 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif
Length = 1126
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 87 KRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEHIQQSNSFK 206
K+P + + PK TTF N L ++H+ ++ FK
Sbjct: 584 KKPIGLVSLLNEESNFPKATDTTFANKL-KQHLNANSCFK 622
>At1g73690.1 68414.m08533 cell division protein kinase, putative
similar to cell division protein kinase 7 [Homo sapiens]
SWISS-PROT:P50613
Length = 398
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 24 PDAATELSAPVATKVFT-APTSKRPAPTPKPMKQSDAKPKGKQTTFVNSLHEEH 182
P + + + + FT AP+ P P+P+ + DAK + + L H
Sbjct: 276 PKSRISIQQALKHRYFTSAPSPTDPLKLPRPVSKQDAKSSDSKLEAIKVLSPAH 329
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 81 TSKRPAPTPKPMKQSDAKPKGKQT 152
TS P T P+KQ DA+ +GK++
Sbjct: 370 TSIAPVITVTPLKQQDAETEGKKS 393
>At1g18040.1 68414.m02231 cell division protein kinase, putative
similar to cell division protein kinase 7 [Homo sapiens]
SWISS-PROT:P50613
Length = 391
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 24 PDAATELSAPVATKVFT-APTSKRPAPTPKPMKQSDAK 134
P A + + + FT AP PA PKP+ + D K
Sbjct: 277 PKARISIKQALEHRYFTSAPAPTDPAKLPKPVPKQDGK 314
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 83 QQEASAYTETDEAVRRETERKTNDLRKFTTRRTHSTVEFIQTPHVQ 220
+ EA +E V E E+K + K T + T +TP V+
Sbjct: 48 KSEAPIVETNEEVVVEEAEKKDEETEKKTEEKDEKTEVITETPVVE 93
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 78 PTSKRPAPTPKPMKQSDAKP 137
PT K P PT KP S KP
Sbjct: 122 PTYKPPTPTVKPPTTSPVKP 141
>At4g30680.1 68417.m04349 MA3 domain-containing protein similar to
SP|Q03387 Eukaryotic initiation factor (iso)4F subunit
P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum};
contains Pfam profile PF02847: MA3 domain
Length = 263
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 84 SKRPAPTPKPMKQSDAKPK 140
S++P P P P +Q+ KPK
Sbjct: 65 SQQPKPVPSPTRQTVEKPK 83
>At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 521
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 96 APTPKPMKQSDAKPKGKQTTFVNSLHEEHIQ 188
A TP P +++ +PKG+ FVN H IQ
Sbjct: 37 ANTPIPHRRNP-EPKGQDLDFVNVAHSHLIQ 66
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 66 VFTAPTSKRPAPTPKPMKQS-DAKPKGKQTTFVNSLHEEHIQQS 194
+FT PTS P P P + + K K + + S + H+ S
Sbjct: 362 LFTQPTSAPPPTRPPPPRPTRPIKKKVNEPSIPTSAYHSHVPSS 405
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 3 ALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPMKQSDAKP 137
A G P +L P + ++ P + PAP P P S +P
Sbjct: 94 ACSGSGAPPPPPDLFPPPSAQMLPPPPASSPAP-PSPPSSSRPRP 137
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 78 PTSKRPAPTPK--PMKQSDAKPKGKQTTFVN 164
P+S P+ PK P+K S A PK T V+
Sbjct: 1437 PSSSEPSGLPKLKPIKNSKAAPKSAMKTSVD 1467
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,720,385
Number of Sequences: 28952
Number of extensions: 104430
Number of successful extensions: 555
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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