Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30853
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 81 1e-15
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 73 4e-13
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 48 9e-06
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 48 1e-05
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 4e-05
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 37 0.021
SB_47988| Best HMM Match : CH (HMM E-Value=0.47) 36 0.028
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 35 0.086
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.61
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 1.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 1.4
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 31 1.4
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 30 1.8
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17915| Best HMM Match : 7tm_1 (HMM E-Value=6e-30) 29 4.3
SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42) 28 7.5
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 28 9.9
SB_43170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 9.9
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 101 bits (242), Expect = 7e-22
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 8/170 (4%)
Frame = +1
Query: 79 QEQEVLTWISDVLGEPL--PNGAYEDV---LRDGVILCKLANKLAPGSVKKIQERGTNFQ 243
+E+E WI VLGE + NG + V L+DG +LC+LAN+L G KI ++ F+
Sbjct: 432 KEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GGDLKINQQKMPFK 489
Query: 244 LMENIQRFQAAIKK-YGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQL 420
MENI F + I+ GV + ++FQT DL+E+ N+ V C++A+GR + PQL
Sbjct: 490 QMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRRAYSLGKDV-PQL 548
Query: 421 GPKMADKNERTFTEEQLRAHNAELN-LQMG-FNKGASQSGHGGFGNTRHM 564
GPK + KN R FTE QL +N QMG K + + FG R +
Sbjct: 549 GPKESTKNPRQFTERQLNEGKTIINSFQMGPAAKNVATASGQSFGRQRQI 598
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 93.9 bits (223), Expect = 1e-19
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Frame = +1
Query: 70 NKDQEQEVLTWISDVLGEPLPNGA-----YEDVLRDGVILCKLANKLAPGSVKKIQERGT 234
+ D + WI +LGE + G +VL+DG +LC++ANKL G++K I
Sbjct: 65 DSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKLG-GNIK-INSSKM 122
Query: 235 NFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGP 414
F++MEN +F GVP+ ++FQT DL+E++N+P V ++ALGR + T
Sbjct: 123 AFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK-TCL 181
Query: 415 QLGPKMADKNERTFTEEQLRA 477
LGPK A N R FTEEQ RA
Sbjct: 182 ALGPKEASANPREFTEEQRRA 202
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 81.0 bits (191), Expect = 1e-15
Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Frame = +1
Query: 79 QEQEVLTWISDVLGEPLPNGA-----YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQ 243
QE+E WI VLGE + GA + VL+DG IL +LA KL G+ K+ E+ F+
Sbjct: 26 QEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIKVNEQNMPFK 83
Query: 244 LMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLG 423
MENI F + GV + FQTADL++ N +T C Q + P LG
Sbjct: 84 QMENIGNFLSHCGHLGVASGDQFQTADLYDNAN---MTSC--------QLIKDLDIPTLG 132
Query: 424 PKMADKNERTFTEEQLRA 477
PK A+ N R FTEEQLRA
Sbjct: 133 PKEAEANVREFTEEQLRA 150
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 142 YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTA 321
+++ L+ GV+LCKLAN + PG++KKI NF +MENI+ F ++ GV + F T
Sbjct: 90 FQNTLKSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTI 149
Query: 322 DLFERRNIPQVT 357
DLFE +N+ QV+
Sbjct: 150 DLFEGKNMHQVS 161
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 64.9 bits (151), Expect = 7e-11
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 130 PNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKK-YGVPEEE 306
P + + LR GVILCK+ANK+ ++ KI E +F + ENI +F ++ G+
Sbjct: 301 PGETFAEPLRSGVILCKIANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLN 360
Query: 307 IFQTADLFERRNIPQV 354
+FQT DLFER+N+ V
Sbjct: 361 LFQTVDLFERQNVGMV 376
Score = 36.7 bits (81), Expect = 0.021
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Frame = +1
Query: 187 NKLAPGSVKKIQE----RGTNFQLMENIQRFQAAI--KKYGVPEEEIFQTADLFERRNIP 348
N++ PG++ KI R FQ++ENI++F A + + ++F DL+E+ N+
Sbjct: 205 NEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNNVG 264
Query: 349 QV 354
QV
Sbjct: 265 QV 266
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +1
Query: 184 ANKLAPGSVKK--IQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNI 345
AN + PG +KK + F++MENI F IK YGV EE IF T DL+E+RN+
Sbjct: 188 ANAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 88 EVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRF 267
E WI P N + + L DGV+LC+L +A SV +I ++GT +N+ F
Sbjct: 32 EARRWIERATFTPFKNDDFRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSVF 91
Query: 268 QAAIKKYGVPEEEIFQTADLFE 333
A + G+ + ++F+ DL E
Sbjct: 92 FRACEALGLDKYQLFEHEDLDE 113
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +1
Query: 247 MENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQKHPEFTGPQLGP 426
MENI F + GV + ++FQT DL+E++N+ A G PQLGP
Sbjct: 18 MENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAAR----AKG--------LNCPQLGP 65
Query: 427 KMADKNERTFTEEQLRA 477
K A+ N R+F E++LRA
Sbjct: 66 KEAEANPRSFDEDKLRA 82
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 38.3 bits (85), Expect(2) = 4e-05
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 226 RGTNFQLMENIQRFQAAIKK--YGVPEEEIFQTADLFERRNIPQVTLCLYALGRITQKH 396
+ T+ + ENI F A ++ + +++FQT LFER+N+ QV + A R +KH
Sbjct: 891 KSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFARKVRKH 949
Score = 26.6 bits (56), Expect(2) = 4e-05
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 406 TGPQLGPKMADKNERTFTEE 465
T P GPK A+KN R F E+
Sbjct: 984 TVPLFGPKEAEKNPRNFPEQ 1003
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +1
Query: 154 LRDGVILCKLANKLAPGSVKKI--QERGTNFQLMENIQRF-QAAIKKYGVPEEEIFQTAD 324
LRDGV+LC++AN L PG+V + + + + F ++NI+ F A + + + + ++F +
Sbjct: 55 LRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANE 114
Query: 325 LFERRNIPQVTLCLYALGRITQKHPEFTGPQLGPKMADKNE-RTFTEEQLRAHNAELNLQ 501
L++ + +V L L + PE P + N+ + +E + ++ E+ L
Sbjct: 115 LYDVSDFGKVVNTLSKLSHL----PESLHRGFEPFPPNTNKFAAYQDEDIYSNLEEIALS 170
Query: 502 MGFNK 516
G +
Sbjct: 171 SGITQ 175
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 154 LRDGVILCKLANKLAPGSVKKIQ------ERGTNFQLMENIQRFQAAIKKYGVPEEEIFQ 315
L DGV+LC L N G++ I + T + M+N+ F A KK GV E +
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395
Query: 316 TADLFERRNIPQVTLCLYAL 375
+AD+ + ++ +V + AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 36.7 bits (81), Expect = 0.021
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Frame = +1
Query: 82 EQEVLTWISDVLGEP-LPNGAYEDVLRDGVILCKLAN-------------------KLAP 201
++++ +WIS +LGE L + +L GV+LC+LAN L P
Sbjct: 29 KEDLASWISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRGLFP 88
Query: 202 GSVKKIQERGT---NFQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYA 372
++RG +F +N+ F ++ VP+ +F+T DL +N V L L
Sbjct: 89 ACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLTLLE 148
Query: 373 LGR 381
+ R
Sbjct: 149 VAR 151
>SB_47988| Best HMM Match : CH (HMM E-Value=0.47)
Length = 133
Score = 36.3 bits (80), Expect = 0.028
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 85 QEVLTWISDVLGEPLPNGA-YEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQ 261
+E W+ L E LP E+ LR GV L KL N +P K + R +
Sbjct: 51 EEARVWMEACLKEELPETTNMEEALRCGVHLAKLGNFFSP---KMVPAR----------K 97
Query: 262 RFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYAL 375
F K Y V E T D+++++N+P++ C++AL
Sbjct: 98 IFDKDCKHYTVFYPE---TTDIYDKKNMPKLIYCIHAL 132
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 35.5 bits (78), Expect = 0.049
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +1
Query: 412 PQLGPKMADKNERTFTEEQLRA 477
P LGPK A+ N R FTEEQLRA
Sbjct: 10 PTLGPKEAEANVREFTEEQLRA 31
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 34.7 bits (76), Expect = 0.086
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 247 MENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQV 354
M I +F +GV + ++FQT DL+E++NI QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 239 KLVPLSWIFFTDPGANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTSCSWSLF 69
K+VP SW ++ L PS++ + P G GS + + +R S SW+ F
Sbjct: 6989 KIVPKSW----HSHMSMRVELYGCYPSMTRLCFKPLGVGSRRLPDANLRASSSWNRF 7041
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +1
Query: 55 TMPARNKDQEQEVLTWISDVLGEP------LPNGAYEDV------LRDGVILCKLANKLA 198
T + +K+++ WI+ L E LP A ED ++DG++LCK+ N A
Sbjct: 38 TKHSHSKEEQVAFADWINSSLKEDESVHKYLPIDASEDSSDLYEKVKDGILLCKMINLSA 97
Query: 199 PGSV 210
PG++
Sbjct: 98 PGTI 101
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 24/113 (21%)
Frame = +1
Query: 154 LRDGVILCKLANKL--------------APGSVKKIQE--RGTN----FQLMENIQRFQA 273
L DG +LCKLAN + PG K +E RG F EN+Q+F
Sbjct: 697 LEDGTLLCKLANYIQEMADTYGQKHNTHVPGKKIKFKESKRGHRESKLFHSRENVQKFLT 756
Query: 274 AIKKYGVPEEEIFQTADLFE----RRNIPQVTLCLYALGRITQKHPEFTGPQL 420
+ + +PE +F++ D+ R ++ +CL + R K+ P+L
Sbjct: 757 WCRWHDIPEAILFESNDVVLVDECRTGGREIVICLMEIARRVIKYEIKQVPKL 809
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 82 EQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQ 222
++++ W+S VL + + D L +GV+LCKLA + + + I+
Sbjct: 38 KEDLAEWLSRVLEVEVQADNFMDYLDNGVLLCKLAQLIQKAATEWIK 84
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 157 RDGVILCKLANKLAPGSV--KKIQERGTNFQLMENIQRFQAAIKKYGVP 297
RDG+ +C+L N L PG + K +E+ TN + I Q A +G+P
Sbjct: 454 RDGMAICELVNALQPGLIPDSKYKEK-TNSEATAKI-GIQTAHDAFGIP 500
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 82 EQEVLTWISDVLGEPLPNG--AYEDVLRDGVIL 174
+ E + WI VLGE + G EDVL+DG IL
Sbjct: 10 DAEAVDWIEKVLGEKVCQGKSINEDVLKDGQIL 42
>SB_17915| Best HMM Match : 7tm_1 (HMM E-Value=6e-30)
Length = 387
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 589 IFSTLISVFVNGRIWLNDFFTFKIILPITLCQRSCDRFYLIYFKY*STAFGTLIFVS 759
I S ++ F++ I L K +L QRSCD F ++ + + + + T+ F++
Sbjct: 61 ILSLSLADFLDSGIALQMVVFIKYLLRFPWTQRSCDSFIVLLYTFRTASASTVTFMA 117
>SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42)
Length = 1088
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 118 GEPLPNGAYEDVLRDGVILCKLANKLAPGSVKK---IQERGTNFQLMENIQRFQAAIKKY 288
GEP P+ + RDG + C L +L SV I ++ T + + ++ F +
Sbjct: 328 GEPGPHARACGIQRDGQLCCHLRGRLPEESVHSAFFIDDKETT-KRAKVLETFDEKLAPT 386
Query: 289 GVPEEEIFQTADLFERRNIPQVTL-CLYALGRITQKHPEF 405
G +E++F+ E + + L C+ ++ R Q F
Sbjct: 387 GCTKEDLFRLERKLEIKLVAVDALACMGSIPRPKQSCKNF 426
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/96 (18%), Positives = 42/96 (43%)
Frame = +1
Query: 82 EQEVLTWISDVLGEPLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQ 261
+Q +L W+ + E +P + DG + L + +APG + + ++ L Q
Sbjct: 496 KQALLAWVKSKMPESVPMDNFTTHWNDGRAIACLVDAVAPGLLPECEDLDPKDALQNAQQ 555
Query: 262 RFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLY 369
+ A +P ++ AD+ + + ++++ Y
Sbjct: 556 AMKLAQDWLDIP--QVLDPADMVNPK-VDELSMMTY 588
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 233 PTSSSWRTFKGSKRQSRNTEYQKKKYSKPPIFLRGVTFPK*HYVCTLWE 379
P + ++T + R E+Q+K+Y L+G TF + LW+
Sbjct: 51 PNTEKYKTEEALNRSRAYLEFQRKRYGNLYQLLKGNTFTDAEDLVKLWD 99
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 470 FGPTTLNLTSKWASIRAPPSPVMVASVTPATCK 568
FG TL W SI+A P V++ PA C+
Sbjct: 1728 FGDVTLPSAVDWRSIQAQPISGPVSTTCPAKCQ 1760
>SB_43170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -3
Query: 314 WNISSSGTPYFL--IAAWNL*MFSMSWKLVPL-SW 219
WN GTPYF+ +WNL + + L PL SW
Sbjct: 29 WNPVLHGTPYFMGPRTSWNLVLHGTPYFLEPLTSW 63
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 352 VTLCLYALGRITQKHPEFTGPQLGPKMADKNERTFTEEQLRAHNAELNL 498
+ + L R+TQK P G +L ++ D NER +EQ A A++ L
Sbjct: 1153 IRVSLDVASRVTQKIPNEQGKELEHELDDLNER--LDEQGGATQAQMEL 1199
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,349,135
Number of Sequences: 59808
Number of extensions: 599531
Number of successful extensions: 4661
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4649
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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