Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30852
(495 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.074
SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1) 31 0.69
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 30 0.91
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 30 0.91
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 30 0.91
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 30 0.91
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 30 0.91
SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_58030| Best HMM Match : cIII (HMM E-Value=7.7) 29 2.8
SB_5588| Best HMM Match : 3-dmu-9_3-mt (HMM E-Value=0.25) 29 2.8
SB_40568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_39682| Best HMM Match : Transposase_25 (HMM E-Value=4.8) 28 3.7
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16) 28 4.9
SB_46914| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 27 6.4
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 27 8.5
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 33.9 bits (74), Expect = 0.074
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 7 PTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHH 183
P T P+ P + P HP S+ PY T L G + REP P S+ H
Sbjct: 474 PHHATSYNAPSGMPTHREPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQ 531
Query: 184 P 186
P
Sbjct: 532 P 532
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 58 QDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHHP 186
+ P HP S+ PY T L G + REP P S+ H P
Sbjct: 520 EPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQP 561
>SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)
Length = 570
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 297 HLRCLFANHSLQHR-LCHLLFHKGITVVVVRRCPHC 193
H C + +LQ+R LCH L HK V ++ C HC
Sbjct: 329 HKLCYYV--ALQYRSLCHYLLHKLCYCVALQYCSHC 362
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 74 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 133
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 134 QRDPAVTRKFPV 145
>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 74 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 133
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 134 QRDPAVTRKFPV 145
>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 74 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 133
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 134 QRDPAVTRKFPV 145
>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 346
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 187 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 246
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 247 QRDPAVTRKFPV 258
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 167 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 226
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 227 QRDPAVTRKFPV 238
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 484 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 543
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 544 QRDPAVTRKFPV 555
>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTL 415
++R SRC + A C + N + +S+Y N L +G+K + L + G
Sbjct: 74 SERLSSRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRR 133
Query: 416 SRGKSFTKNAPM 451
R + T+ P+
Sbjct: 134 QRDPAVTRKFPV 145
>SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1261
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +1
Query: 76 EEEVVSNWPYRTTPLVLPGAKVRRE---PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQK 246
++E++ + + P A E PG ++ R P P P N + +L +K
Sbjct: 290 KQEILESQEFAQAPATPRSATTNPEDSSPGNRKAANRETPPPGTSTPKNIEAASSLQHEK 349
Query: 247 VAESV-LQRVVGEEAPKVLHKQFNSPINL 330
V E++ ++R+ EE K K N L
Sbjct: 350 VVETLEIRRMAVEEKRKKRMKYENGETGL 378
>SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 311 STLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLS-RGKSFTKNA 445
ST +S T RT+ + S ++ R+C++ T GR+ RGK +N+
Sbjct: 155 STTRSPVTVARTITSQSSNRQRVCEIFGNTSGRSRRVRGKRVQQNS 200
>SB_58030| Best HMM Match : cIII (HMM E-Value=7.7)
Length = 167
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 213 VRRCPHCWVGVMTQVTLCGARLPSDLSSREHERSGAVRPVADNFFFRMFRILVSVREEVG 34
V + P G+ + C A +P +++ H R +P+ F+ +I ++V
Sbjct: 63 VAKLPVRMFGIRYEEATCAAHVPCTINNSPHSRLNK-QPIPSRFYPVFDKIGLTVAGYQP 121
Query: 33 VERHCYTCR 7
R CY C+
Sbjct: 122 GTRWCYRCK 130
>SB_5588| Best HMM Match : 3-dmu-9_3-mt (HMM E-Value=0.25)
Length = 526
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 269 EWLAKRHLRCCTSNSTLQS-IYTRNRTLQTLSGSKLRL 379
EWL +H R C S Q+ T+NRT+ T S ++RL
Sbjct: 51 EWLVAKHERACHRASEFQAKTMTKNRTIWTPS-PRIRL 87
>SB_40568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESV-LQRVVGEEAPKVLHKQFNSPIN 327
PG ++ R P P P N + +L +KV E++ ++R+ EE K K N
Sbjct: 176 PGNRKAANRETPPPGTSTPKNIEAASSLQHEKVVETLEIRRMAVEEKRKKRMKYENGETG 235
Query: 328 L 330
L
Sbjct: 236 L 236
>SB_39682| Best HMM Match : Transposase_25 (HMM E-Value=4.8)
Length = 201
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESV-LQRVVGEEAPKVLHKQFNSPIN 327
PG ++ R P P P N + +L +KV E++ ++R+ EE K K N
Sbjct: 21 PGNRKAANRETPPPGTSTPKNIEAASSLQHEKVVETLEIRRMAVEEKRKKRMKYENGETG 80
Query: 328 L 330
L
Sbjct: 81 L 81
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 SRCCSEWLAKRHLRCCTSNSTL-QSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLSRGKS 430
SRC + A C + N + +S+Y N L +G+K + L + G R +
Sbjct: 384 SRCAKVYFADNRGVCLSRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQRDPA 443
Query: 431 FTKNAPM 451
T+ P+
Sbjct: 444 VTRKFPV 450
>SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16)
Length = 488
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 117 RSGAVRPVADNFFFRMFRILVSVREEVGVERHCYTCRYG 1
++ A PVADNF R +I V + + V + CR G
Sbjct: 53 KNEATLPVADNFKDRFQQIQVEIEHMIAVLQQMELCRSG 91
>SB_46914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1
Query: 363 PDRVCNVLFRV*IDWRVELLVQHLRCLFANHSLQHR-----LCHLLFHK 232
PD N + + + R + L+ H+R F N + R L HL+FHK
Sbjct: 71 PDTTANQITSMFVKIRKQELIIHIRLTFENEHRRIRLQPGLLIHLIFHK 119
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 27.5 bits (58), Expect = 6.4
Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Frame = +1
Query: 112 TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPN--HDYRDTLMKQKVAESVLQRVVGEE 285
TPL L R P P L H P P +A + H + L+ + S V
Sbjct: 420 TPLTLSTKPCFRTPHPLSQALLHIPRPFNQALLHVPHTFNQALLHSHPSPSQPSPVSHPP 479
Query: 286 APKVLHKQFNSPINLYSEQNIANSIRQQTSP 378
A +LH SP S + + T P
Sbjct: 480 AQALLHTSHPSPATHPSPKPCFTFLTLSTKP 510
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 46 PNGYQDPKH-PEEEVVSNWPYRTTPLVLPGAKVRREPGP 159
P+ + P+H P+ E + Y++TP+ P K R P P
Sbjct: 432 PDSHALPQHTPQGEDLGQAAYQSTPISKPSVKSRLGPRP 470
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 296 CCTSNSTLQSIYTRNRTLQTLS 361
CC + +TL+ I T R LQT+S
Sbjct: 390 CCGNRATLEKILTFGRYLQTMS 411
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 239 NKRWQSRCCSEWLAKRHLRCCTSNSTLQSIYTRNRTLQTLSGS 367
N W S CS LA +N + ++ RNR +T +G+
Sbjct: 229 NSPWYSEACSSTLASAFSSGSWNNRKIVTVDVRNRCTKTHTGT 271
>SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 156 PHRELPASSPQPSNEGTS 209
PH+ P PQP NEG S
Sbjct: 268 PHQPAPGIPPQPMNEGNS 285
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 27.1 bits (57), Expect = 8.5
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +3
Query: 3 HTYKCNNVAQPQLLPERIPGS*TS*RRSCQQLAVPHHSSRAPGS*GPKGAWPHRELPASS 182
+T++ N + +P R P T+ + S P S GP P R+ P SS
Sbjct: 386 NTFRNNIRNRKDSMPPRPPKPSTNGQASVDGQLKPPSSPSPRRQTGPPSPKPSRQPPPSS 445
Query: 183 PQPSNEGTS*PRLP*YPYET 242
PQ T R P + YET
Sbjct: 446 PQ-RIAPTPGHRRPVFMYET 464
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,265,989
Number of Sequences: 59808
Number of extensions: 389664
Number of successful extensions: 1292
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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