Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30850
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 251 4e-67
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 249 2e-66
08_02_1278 - 25838146-25839411 32 0.53
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.93
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 30 1.6
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 30 2.2
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 2.2
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 5.0
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 29 5.0
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 28 6.6
02_04_0073 - 19471254-19472681 28 6.6
01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,266... 28 6.6
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 8.7
03_03_0125 - 14630078-14630136,14630197-14631160 28 8.7
03_03_0122 - 14617879-14618871 28 8.7
03_02_0286 + 7100342-7100504,7100613-7100719,7102109-7102240,710... 28 8.7
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 28 8.7
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 251 bits (615), Expect = 4e-67
Identities = 120/243 (49%), Positives = 158/243 (65%), Gaps = 1/243 (0%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WR+WH ARGH IE +
Sbjct: 92 GQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETV 151
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKGP
Sbjct: 152 PELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGP 211
Query: 361 LIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGS 537
LI++ + + +AFRN+PGV+ APGGHLGRFVIWT+SAF +L+ ++G+
Sbjct: 212 LIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTESAFKKLEEVYGT 271
Query: 538 WKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAML 717
++ PS +KK F LP+PKMAN DL R++ SDE++ V++ NK V R ++ NPL N A+L
Sbjct: 272 FEAPSLKKKGFILPRPKMANADLGRIINSDEVQSVVKPLNKEVKRREKRKNPLKNVAAVL 331
Query: 718 KLN 726
KLN
Sbjct: 332 KLN 334
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 249 bits (609), Expect = 2e-66
Identities = 121/243 (49%), Positives = 156/243 (64%), Gaps = 1/243 (0%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ARGH IE +
Sbjct: 91 GQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGV 150
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKGP
Sbjct: 151 PEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGP 210
Query: 361 LIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGS 537
LI++ + + +AFRN+PGV+ APGGHLGRFVIWT+ AF +LD ++G
Sbjct: 211 LIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTECAFKKLDEVYGG 270
Query: 538 WKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAML 717
+ TP+ +KK F LP+PKMAN DL+RL+ SDE++ V++ NK V + NPL N A+L
Sbjct: 271 FDTPALKKKGFVLPRPKMANADLSRLINSDEVQSVVKPINKEVKLREARRNPLKNVAAVL 330
Query: 718 KLN 726
KLN
Sbjct: 331 KLN 333
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 258 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 151
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.1 bits (67), Expect = 0.93
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 446 TS*SWLREVILDVSSSGLSPHSAGLTPYSGHGRHHQNKRR----TSTCPNRRWPTLTSHV 613
+S S+LR + LD+SSS +P S+ H HHQ + S+ P WP
Sbjct: 376 SSSSFLRCLGLDMSSSSSAPPSSSGQQQQHHHHHHQETMQVPLPASSLP--EWPPRLQPE 433
Query: 614 FSSLMRSGRSSVLPTNA 664
S ++ SG LP +A
Sbjct: 434 PSPMLSSGLGLGLPYDA 450
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 249 EDDSLFGLVDLLDFVGYN--QGKLGNLFNNVSSSLNERWDASSSNGCCQGR 103
+DD +F V LLD VGYN +G++ N SL + W S CCQG+
Sbjct: 331 DDDVVFLHVKLLDLVGYNFISRTVGSILIN---SLLDAWH-SCVYICCQGK 377
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -1
Query: 318 LTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERW 139
L S TLR VHL + QE + L L L VG N+ K G F + S L++
Sbjct: 947 LKSLHTLRHVHLAWGNTVI---QEIERLTQLRKL-GVVGINK-KNGPSFYSAISKLSQLE 1001
Query: 138 DASSSNGCCQGRSPLSEVDATVPAPPGLR 52
S G CQG S +T P P L+
Sbjct: 1002 SLSVCAGWCQGLHGTSSSSSTSPPPENLQ 1030
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 460 APG--GHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 600
APG G GR+V+ SA LDP F SW S++ K F++ + A++
Sbjct: 670 APGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEISHASS 717
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -1
Query: 372 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 241
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 525 GVKPAECGLSPDDETSKMTSRSQLQEVQLVNIQELHTGDVA 403
G+ A G++ DD+ K SR L + ++N+ +GD A
Sbjct: 147 GLSCARGGVASDDDDDKQASRRALPPMPVLNLSSDSSGDAA 187
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 68 AGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRLSS 247
A AST+ G RPW ++++R + R P+ W + RR+ R + +++
Sbjct: 8 AAAAASTARGGHRPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAA 67
Query: 248 S*GAS 262
GA+
Sbjct: 68 KAGAA 72
>02_04_0073 - 19471254-19472681
Length = 475
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 500 SPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMR 631
+P G +P S HG HH++++ T N + L V ++R
Sbjct: 20 APRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLR 63
>01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,
2668344-2668410,2668473-2668562,2668672-2668787,
2668999-2671924
Length = 1170
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -1
Query: 453 QEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDI 274
Q L++++ LH D + + L+ED + ++ + T V + +T+ LV+LK
Sbjct: 937 QAENLISLKRLHMVDCQNAKQFRMCLLEDQQLAVDVVTVVVESRVARAKETVVLVYLKCY 996
Query: 273 R 271
R
Sbjct: 997 R 997
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 60 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 152
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>03_03_0125 - 14630078-14630136,14630197-14631160
Length = 340
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 478 GRFVIWTQSAFGRL-DPLFGSWK 543
G FV+W AFG L L G+WK
Sbjct: 127 GGFVVWADRAFGPLAGSLLGTWK 149
>03_03_0122 - 14617879-14618871
Length = 330
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 478 GRFVIWTQSAFGRL-DPLFGSWK 543
G FV+W AFG L L G+WK
Sbjct: 124 GGFVVWADRAFGPLAGSLLGTWK 146
>03_02_0286 +
7100342-7100504,7100613-7100719,7102109-7102240,
7102383-7102539,7103099-7103220
Length = 226
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = -1
Query: 510 ECGLSPDDETSKMTSRSQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTLDTTTV 331
E G PD + + +T R +++ + +G+V E+ + + D ++ LDT
Sbjct: 50 ESGTQPDIDLATITDRMEVKRA-------VQSGNVQEAIEK----INDLNPTI-LDTNPQ 97
Query: 330 AHFTLTSTKTLRLVHLKDIRPCLEAPQED 244
+F L K + L+ I LE QE+
Sbjct: 98 LYFHLQQQKLIELIRAGKINEALEFAQEE 126
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 510 ECGLSPDDETSKMTSRSQLQEVQ 442
+CG+ PD+ S++ S+ QEV+
Sbjct: 51 DCGMDPDEAVSRLLSQDTFQEVK 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,144,343
Number of Sequences: 37544
Number of extensions: 425796
Number of successful extensions: 1424
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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