Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30850
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 297 2e-80
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 297 2e-80
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 297 2e-80
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 293 6e-79
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 290 4e-78
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 37 0.064
BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open readi... 34 0.60
BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open readi... 34 0.60
AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open readi... 34 0.60
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 5.6
AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein. 31 5.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 7.3
BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10 do... 30 9.7
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 102 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 161
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 162 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 221
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 222 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 281
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 282 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 341
Query: 721 LN 726
LN
Sbjct: 342 LN 343
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 297 bits (730), Expect = 2e-80
Identities = 137/242 (56%), Positives = 169/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 293 bits (718), Expect = 6e-79
Identities = 135/242 (55%), Positives = 167/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH +GH IE++
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMPKGHRIEEV 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGP 207
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IW +SAF +LD L+G+W
Sbjct: 208 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTW 267
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 268 RKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 327
Query: 721 LN 726
LN
Sbjct: 328 LN 329
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 290 bits (711), Expect = 4e-78
Identities = 136/242 (56%), Positives = 167/242 (69%)
Frame = +1
Query: 1 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 180
GQGAFGNMCRGGRMFAPTK WRRWH ++GH IE+
Sbjct: 88 GQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEF 147
Query: 181 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 360
PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+GP
Sbjct: 148 PELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGP 206
Query: 361 LIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSW 540
II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+G+W
Sbjct: 207 CIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTW 266
Query: 541 KTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLK 720
+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLK
Sbjct: 267 RKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLK 326
Query: 721 LN 726
LN
Sbjct: 327 LN 328
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.064
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 156 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 55
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.60
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -1
Query: 249 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 94
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 93 SEVDATVPAPPGL 55
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.60
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -1
Query: 249 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 94
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 93 SEVDATVPAPPGL 55
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.60
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -1
Query: 249 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 94
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 93 SEVDATVPAPPGL 55
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 497 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSG 637
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein.
Length = 287
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 54 EALAALAPSRQPPTAESGLGSSRCCYWRPSAR 149
E L A R PPT S ++ CC WR + R
Sbjct: 191 ENLLADVKGRGPPTTRSRAATANCCAWRAAIR 222
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 520 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 654
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 520 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 654
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
>BC050603-1|AAH50603.1| 562|Homo sapiens methyltransferase 10
domain containing protein.
Length = 562
Score = 29.9 bits (64), Expect = 9.7
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 471 SSWT-FRHLDSVRIRQA*PLIRVMEDTIKTKEELQPAPTEDGQH*PHTSSQV**DQEGPP 647
+SW R R+RQ + R ED I+ EE +P P E G ++ QE P
Sbjct: 376 NSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESG----NSQELARGPQERTP 431
Query: 648 CSQQTRD 668
C R+
Sbjct: 432 CGPALRE 438
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,903,072
Number of Sequences: 237096
Number of extensions: 2253467
Number of successful extensions: 5974
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5959
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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