Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30846
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    78   9e-17
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    57   1e-10
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 77.8 bits (183), Expect = 9e-17
 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
 Frame = +3

Query: 147 TSARDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKVDKMVTFFDHFD-FD 323
           T+ RDP FY+ +  I     E+K     YT+  L++ G+ +S+++V    +  + F+ F 
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFW 451

Query: 324 AFNTVYFSKEELKSSPHGYK-VRQPRLNHKPFT--VTIDIKSDVATNAVVKMFLGPKYDE 494
             + V  S+  +   P G   VR   L H+PFT  +T++ +S+       ++FL PK DE
Sbjct: 452 QQSDVDLSRG-MDFQPRGSVFVRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDE 510

Query: 495 NGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLD 662
            G P+   D  + F ELD F   +  GQ+ ITR+S+  +     ++P    ++ LD
Sbjct: 511 RGNPWLFRDQKIMFIELDKFTVNLKQGQNTITRASSQSSV----TIPFERTFRNLD 562


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 57.2 bits (132), Expect = 1e-10
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
 Frame = +3

Query: 156 RDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKVDK-------MVTFFDHF 314
           RDP F++ +  I     EFK     YT   L++ G+ +++++V         + TF+   
Sbjct: 395 RDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQS 454

Query: 315 DFDAFNTVYFSKEELKSSPHGYK-VRQPRLNHKPFTVTIDIKSDVATN-AVVKMFLGPKY 488
           D D    + F        P G   VR   L ++ FT  I + +         ++FL P++
Sbjct: 455 DLDLSRGLDFQ-------PRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQF 507

Query: 489 DENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLDQG 668
           DE G P+   +    F ELD F   +  G + ITR ST+ +     ++P    ++ LD  
Sbjct: 508 DERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTESSL----TIPFERTFRNLDAN 563

Query: 669 K 671
           +
Sbjct: 564 R 564



 Score = 27.5 bits (58), Expect = 0.13
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 709 PSRLMLPKGTYDGFPFQLVVFV 774
           P  ++LPKGT  G+P  L V +
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMI 603


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 375 GYKVRQPRLNHKPFTVTI 428
           G K   P LNHKP  +TI
Sbjct: 253 GPKQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 375 GYKVRQPRLNHKPFTVTI 428
           G K   P LNHKP  +TI
Sbjct: 145 GPKQELPDLNHKPLNLTI 162


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 151  RPGTQPSTSSIKGLFNTSSNLNSTRYHTHKKLFTS 255
            +PG +PSTSS +     S    ST  H   K  TS
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTS 1190


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 625 SSLKNAKSVDERVI*DWP 572
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 380 VTVRRALEFFFTEVDGVEGIEVEMVKECDHFVDFDVGNFQT 258
           VT+     F +T++ G E  ++  V+    +  F VG F +
Sbjct: 408 VTIVTYETFVWTQIMGAEFFKLYAVEYFQMYAQFIVGTFNS 448


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 224 LVLFKFDDVLNNPFIEL 174
           ++   FDD +NN  IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,260
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)