Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30846
         (777 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74800.1 68414.m08666 galactosyltransferase family protein co...    33   0.16 
At5g49060.1 68418.m06070 DNAJ heat shock N-terminal domain-conta...    31   0.85 
At4g04710.1 68417.m00692 calcium-dependent protein kinase, putat...    28   6.0  
At1g13860.4 68414.m01627 dehydration-responsive protein-related ...    28   6.0  
At1g13860.3 68414.m01626 dehydration-responsive protein-related ...    28   6.0  
At1g13860.1 68414.m01625 dehydration-responsive protein-related ...    28   6.0  
At3g11040.1 68416.m01332 glycosyl hydrolase family 85 protein co...    28   7.9  

>At1g74800.1 68414.m08666 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 672

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -2

Query: 428 NCHSERLVV-KTWLTD-LVTVRRALEFFFTEVDGVEGIEVEMVKECDHFVD 282
           N  SER+ V K+W+   L+T  + +  FF  + G + + VE+ KE ++F D
Sbjct: 434 NHFSERMAVRKSWMQHVLITSAKVVARFFVALHGRKEVNVELKKEAEYFGD 484


>At5g49060.1 68418.m06070 DNAJ heat shock N-terminal
           domain-containing protein low similarity to SP|Q9QYI4
           DnaJ homolog subfamily B member 12 {Mus musculus};
           contains Pfam profile PF00226: DnaJ domain
          Length = 354

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 300 FFDHFD-FDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATNAVVKMFL 476
           F D FD  + F TV+  + E+  + H Y+ RQPR   +   + +   S +    ++  FL
Sbjct: 189 FDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEINVAGPSCLTIIQILPFFL 248


>At4g04710.1 68417.m00692 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
           contains protein kinase domain, Pfam:PF00069; contains
           EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 575

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/64 (18%), Positives = 32/64 (50%)
 Frame = +3

Query: 243 ALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTV 422
           AL  +   +S+ ++  + T F++ D D   ++ + + ++  + HG K+ +  +      V
Sbjct: 321 ALKVIAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAV 380

Query: 423 TIDI 434
           + D+
Sbjct: 381 SADV 384


>At1g13860.4 68414.m01627 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 603

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 634 RWPKSTSS-WTKG-KIPTDMFNSSDTMPSRLML 726
           RWP      WT   KI  D F SS TM  RLML
Sbjct: 126 RWPVGRDIIWTGNVKITKDQFLSSGTMTKRLML 158


>At1g13860.3 68414.m01626 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 603

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 634 RWPKSTSS-WTKG-KIPTDMFNSSDTMPSRLML 726
           RWP      WT   KI  D F SS TM  RLML
Sbjct: 126 RWPVGRDIIWTGNVKITKDQFLSSGTMTKRLML 158


>At1g13860.1 68414.m01625 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 603

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 634 RWPKSTSS-WTKG-KIPTDMFNSSDTMPSRLML 726
           RWP      WT   KI  D F SS TM  RLML
Sbjct: 126 RWPVGRDIIWTGNVKITKDQFLSSGTMTKRLML 158


>At3g11040.1 68416.m01332 glycosyl hydrolase family 85 protein
           contains similarity to endo-b-N-acetylglucosaminidase
           GI:13774138 from [Mucor hiemalis]
          Length = 701

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 12/217 (5%)
 Frame = +3

Query: 102 FNQYTFIPSALDFYQTSARDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVK 281
           FNQ      +L+  Q S  D  +Y +  + +Q ++EF +      Q  +   G  + D  
Sbjct: 350 FNQGFGYHVSLEGRQLS--DSPWYNISCQSLQPLLEFNEDNKDIIQVTVDQEGKNVFDFS 407

Query: 282 VDKMVTFFDH-----FDFDAFNTVYFSKEELKSSPH-GYKVRQP--RLNHKPFTVTIDIK 437
              +  ++++       F+    + F + +LK   +   ++ +P  +L+  P T++  +K
Sbjct: 408 EQHLNNYYEYDSAREASFNGGGNIVF-RGKLKGDAYFTTRLFKPHLQLSSSPITISYSVK 466

Query: 438 SDVATN-AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAF 614
           SD  +N  ++  F  P  +      + ED    F ++   +Q +      ++  +   A 
Sbjct: 467 SDETSNLGILLSFSSPSLETKSILVAPEDPIRRFDDMS--LQCLTTSVQTVSEWTVHEAS 524

Query: 615 FKEDSLPMAEIYKLL---DQGKDSY*HVQLLGHYAFK 716
              D   + EI       +    S   V LLGH + K
Sbjct: 525 LVMDGHTLTEISAFCYRPENSTKSAEFVALLGHISVK 561


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,877,467
Number of Sequences: 28952
Number of extensions: 296264
Number of successful extensions: 837
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)